BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_C17
(755 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC091522-1|AAH91522.1| 396|Homo sapiens Obg-like ATPase 1 protein. 305 1e-82
BC029376-1|AAH29376.1| 396|Homo sapiens Obg-like ATPase 1 protein. 305 1e-82
BC012842-1|AAH12842.1| 396|Homo sapiens GTP-binding protein 9 (... 305 1e-82
AK074710-1|BAC11153.1| 238|Homo sapiens protein ( Homo sapiens ... 305 1e-82
AK027523-1|BAB55174.1| 396|Homo sapiens protein ( Homo sapiens ... 305 1e-82
AF134478-1|AAP97255.1| 396|Homo sapiens GTP-binding protein pro... 305 1e-82
AC016737-1|AAY14876.1| 213|Homo sapiens unknown protein. 305 1e-82
AL136546-1|CAB66481.1| 396|Homo sapiens hypothetical protein pr... 305 1e-82
BC013925-1|AAH13925.1| 278|Homo sapiens GTPBP9 protein protein. 84 5e-16
BC107864-1|AAI07865.1| 385|Homo sapiens ZC3H13 protein protein. 31 5.9
BC032425-1|AAH32425.1| 469|Homo sapiens ZC3H13 protein protein. 31 5.9
AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein pr... 31 5.9
AL831833-1|CAD38544.1| 796|Homo sapiens hypothetical protein pr... 31 5.9
AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type c... 31 5.9
AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type c... 31 5.9
AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type c... 31 5.9
AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type c... 31 5.9
>BC091522-1|AAH91522.1| 396|Homo sapiens Obg-like ATPase 1 protein.
Length = 396
Score = 305 bits (749), Expect = 1e-82
Identities = 143/195 (73%), Positives = 166/195 (85%), Gaps = 1/195 (0%)
Frame = -2
Query: 748 VDEKKHIRF-GDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIRKKNKWLPKLKEWIDK 572
+D+KK +RF DW+ +IEVLNK+LFLTSKP +YLVNLSEKDYIRKKNKWL K+KEW+DK
Sbjct: 194 IDQKKPVRFYHDWNDKEIEVLNKHLFLTSKPMVYLVNLSEKDYIRKKNKWLIKIKEWVDK 253
Query: 571 NDPGSPLIPFSGVLESKLLDMDPTERVSYLKEHGITSALDKIIVQGYKALQLEYFFTAGA 392
DPG+ +IPFSG LE KL ++ ER YL+ + SAL KII G+ ALQLEYFFTAG
Sbjct: 254 YDPGALVIPFSGALELKLQELSAEERQKYLEANMTQSALPKIIKAGFAALQLEYFFTAGP 313
Query: 391 DEVKAWTIQKGTKAPQAAGRIHTDFEKGFIMAEVMHFKDFKEEGTEAACKAAGKYRQQGR 212
DEV+AWTI+KGTKAPQAAG+IHTDFEKGFIMAEVM ++DFKEEG+E A KAAGKYRQQGR
Sbjct: 314 DEVRAWTIRKGTKAPQAAGKIHTDFEKGFIMAEVMKYEDFKEEGSENAVKAAGKYRQQGR 373
Query: 211 NYVVEDGDIIFFKFN 167
NY+VEDGDIIFFKFN
Sbjct: 374 NYIVEDGDIIFFKFN 388
>BC029376-1|AAH29376.1| 396|Homo sapiens Obg-like ATPase 1 protein.
Length = 396
Score = 305 bits (749), Expect = 1e-82
Identities = 143/195 (73%), Positives = 166/195 (85%), Gaps = 1/195 (0%)
Frame = -2
Query: 748 VDEKKHIRF-GDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIRKKNKWLPKLKEWIDK 572
+D+KK +RF DW+ +IEVLNK+LFLTSKP +YLVNLSEKDYIRKKNKWL K+KEW+DK
Sbjct: 194 IDQKKPVRFYHDWNDKEIEVLNKHLFLTSKPMVYLVNLSEKDYIRKKNKWLIKIKEWVDK 253
Query: 571 NDPGSPLIPFSGVLESKLLDMDPTERVSYLKEHGITSALDKIIVQGYKALQLEYFFTAGA 392
DPG+ +IPFSG LE KL ++ ER YL+ + SAL KII G+ ALQLEYFFTAG
Sbjct: 254 YDPGALVIPFSGALELKLQELSAEERQKYLEANMTQSALPKIIKAGFAALQLEYFFTAGP 313
Query: 391 DEVKAWTIQKGTKAPQAAGRIHTDFEKGFIMAEVMHFKDFKEEGTEAACKAAGKYRQQGR 212
DEV+AWTI+KGTKAPQAAG+IHTDFEKGFIMAEVM ++DFKEEG+E A KAAGKYRQQGR
Sbjct: 314 DEVRAWTIRKGTKAPQAAGKIHTDFEKGFIMAEVMKYEDFKEEGSENAVKAAGKYRQQGR 373
Query: 211 NYVVEDGDIIFFKFN 167
NY+VEDGDIIFFKFN
Sbjct: 374 NYIVEDGDIIFFKFN 388
>BC012842-1|AAH12842.1| 396|Homo sapiens GTP-binding protein 9
(putative) protein.
Length = 396
Score = 305 bits (749), Expect = 1e-82
Identities = 143/195 (73%), Positives = 166/195 (85%), Gaps = 1/195 (0%)
Frame = -2
Query: 748 VDEKKHIRF-GDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIRKKNKWLPKLKEWIDK 572
+D+KK +RF DW+ +IEVLNK+LFLTSKP +YLVNLSEKDYIRKKNKWL K+KEW+DK
Sbjct: 194 IDQKKPVRFYHDWNDKEIEVLNKHLFLTSKPMVYLVNLSEKDYIRKKNKWLIKIKEWVDK 253
Query: 571 NDPGSPLIPFSGVLESKLLDMDPTERVSYLKEHGITSALDKIIVQGYKALQLEYFFTAGA 392
DPG+ +IPFSG LE KL ++ ER YL+ + SAL KII G+ ALQLEYFFTAG
Sbjct: 254 YDPGALVIPFSGALELKLQELSAEERQKYLEANMTQSALPKIIKAGFAALQLEYFFTAGP 313
Query: 391 DEVKAWTIQKGTKAPQAAGRIHTDFEKGFIMAEVMHFKDFKEEGTEAACKAAGKYRQQGR 212
DEV+AWTI+KGTKAPQAAG+IHTDFEKGFIMAEVM ++DFKEEG+E A KAAGKYRQQGR
Sbjct: 314 DEVRAWTIRKGTKAPQAAGKIHTDFEKGFIMAEVMKYEDFKEEGSENAVKAAGKYRQQGR 373
Query: 211 NYVVEDGDIIFFKFN 167
NY+VEDGDIIFFKFN
Sbjct: 374 NYIVEDGDIIFFKFN 388
>AK074710-1|BAC11153.1| 238|Homo sapiens protein ( Homo sapiens
cDNA FLJ90229 fis, clone NT2RM2000306, moderately
similar to PUTATIVE GTP-BINDING PROTEIN W08E3.3. ).
Length = 238
Score = 305 bits (749), Expect = 1e-82
Identities = 143/195 (73%), Positives = 166/195 (85%), Gaps = 1/195 (0%)
Frame = -2
Query: 748 VDEKKHIRF-GDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIRKKNKWLPKLKEWIDK 572
+D+KK +RF DW+ +IEVLNK+LFLTSKP +YLVNLSEKDYIRKKNKWL K+KEW+DK
Sbjct: 36 IDQKKPVRFYHDWNDKEIEVLNKHLFLTSKPMVYLVNLSEKDYIRKKNKWLIKIKEWVDK 95
Query: 571 NDPGSPLIPFSGVLESKLLDMDPTERVSYLKEHGITSALDKIIVQGYKALQLEYFFTAGA 392
DPG+ +IPFSG LE KL ++ ER YL+ + SAL KII G+ ALQLEYFFTAG
Sbjct: 96 YDPGALVIPFSGALELKLQELSAEERQKYLEANMTQSALPKIIKAGFAALQLEYFFTAGP 155
Query: 391 DEVKAWTIQKGTKAPQAAGRIHTDFEKGFIMAEVMHFKDFKEEGTEAACKAAGKYRQQGR 212
DEV+AWTI+KGTKAPQAAG+IHTDFEKGFIMAEVM ++DFKEEG+E A KAAGKYRQQGR
Sbjct: 156 DEVRAWTIRKGTKAPQAAGKIHTDFEKGFIMAEVMKYEDFKEEGSENAVKAAGKYRQQGR 215
Query: 211 NYVVEDGDIIFFKFN 167
NY+VEDGDIIFFKFN
Sbjct: 216 NYIVEDGDIIFFKFN 230
>AK027523-1|BAB55174.1| 396|Homo sapiens protein ( Homo sapiens
cDNA FLJ14617 fis, clone NT2RP1001410, moderately
similar to PUTATIVE GTP-BINDING PROTEIN W08E3.3. ).
Length = 396
Score = 305 bits (749), Expect = 1e-82
Identities = 143/195 (73%), Positives = 166/195 (85%), Gaps = 1/195 (0%)
Frame = -2
Query: 748 VDEKKHIRF-GDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIRKKNKWLPKLKEWIDK 572
+D+KK +RF DW+ +IEVLNK+LFLTSKP +YLVNLSEKDYIRKKNKWL K+KEW+DK
Sbjct: 194 IDQKKPVRFYHDWNDKEIEVLNKHLFLTSKPMVYLVNLSEKDYIRKKNKWLIKIKEWVDK 253
Query: 571 NDPGSPLIPFSGVLESKLLDMDPTERVSYLKEHGITSALDKIIVQGYKALQLEYFFTAGA 392
DPG+ +IPFSG LE KL ++ ER YL+ + SAL KII G+ ALQLEYFFTAG
Sbjct: 254 YDPGALVIPFSGALELKLQELSAEERQKYLEANMTQSALPKIIKAGFAALQLEYFFTAGP 313
Query: 391 DEVKAWTIQKGTKAPQAAGRIHTDFEKGFIMAEVMHFKDFKEEGTEAACKAAGKYRQQGR 212
DEV+AWTI+KGTKAPQAAG+IHTDFEKGFIMAEVM ++DFKEEG+E A KAAGKYRQQGR
Sbjct: 314 DEVRAWTIRKGTKAPQAAGKIHTDFEKGFIMAEVMKYEDFKEEGSENAVKAAGKYRQQGR 373
Query: 211 NYVVEDGDIIFFKFN 167
NY+VEDGDIIFFKFN
Sbjct: 374 NYIVEDGDIIFFKFN 388
>AF134478-1|AAP97255.1| 396|Homo sapiens GTP-binding protein
protein.
Length = 396
Score = 305 bits (749), Expect = 1e-82
Identities = 143/195 (73%), Positives = 166/195 (85%), Gaps = 1/195 (0%)
Frame = -2
Query: 748 VDEKKHIRF-GDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIRKKNKWLPKLKEWIDK 572
+D+KK +RF DW+ +IEVLNK+LFLTSKP +YLVNLSEKDYIRKKNKWL K+KEW+DK
Sbjct: 194 IDQKKPVRFYHDWNDKEIEVLNKHLFLTSKPMVYLVNLSEKDYIRKKNKWLIKIKEWVDK 253
Query: 571 NDPGSPLIPFSGVLESKLLDMDPTERVSYLKEHGITSALDKIIVQGYKALQLEYFFTAGA 392
DPG+ +IPFSG LE KL ++ ER YL+ + SAL KII G+ ALQLEYFFTAG
Sbjct: 254 YDPGALVIPFSGALELKLQELSAEERQKYLEANMTQSALPKIIKAGFAALQLEYFFTAGP 313
Query: 391 DEVKAWTIQKGTKAPQAAGRIHTDFEKGFIMAEVMHFKDFKEEGTEAACKAAGKYRQQGR 212
DEV+AWTI+KGTKAPQAAG+IHTDFEKGFIMAEVM ++DFKEEG+E A KAAGKYRQQGR
Sbjct: 314 DEVRAWTIRKGTKAPQAAGKIHTDFEKGFIMAEVMKYEDFKEEGSENAVKAAGKYRQQGR 373
Query: 211 NYVVEDGDIIFFKFN 167
NY+VEDGDIIFFKFN
Sbjct: 374 NYIVEDGDIIFFKFN 388
>AC016737-1|AAY14876.1| 213|Homo sapiens unknown protein.
Length = 213
Score = 305 bits (749), Expect = 1e-82
Identities = 143/195 (73%), Positives = 166/195 (85%), Gaps = 1/195 (0%)
Frame = -2
Query: 748 VDEKKHIRF-GDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIRKKNKWLPKLKEWIDK 572
+D+KK +RF DW+ +IEVLNK+LFLTSKP +YLVNLSEKDYIRKKNKWL K+KEW+DK
Sbjct: 11 IDQKKPVRFYHDWNDKEIEVLNKHLFLTSKPMVYLVNLSEKDYIRKKNKWLIKIKEWVDK 70
Query: 571 NDPGSPLIPFSGVLESKLLDMDPTERVSYLKEHGITSALDKIIVQGYKALQLEYFFTAGA 392
DPG+ +IPFSG LE KL ++ ER YL+ + SAL KII G+ ALQLEYFFTAG
Sbjct: 71 YDPGALVIPFSGALELKLQELSAEERQKYLEANMTQSALPKIIKAGFAALQLEYFFTAGP 130
Query: 391 DEVKAWTIQKGTKAPQAAGRIHTDFEKGFIMAEVMHFKDFKEEGTEAACKAAGKYRQQGR 212
DEV+AWTI+KGTKAPQAAG+IHTDFEKGFIMAEVM ++DFKEEG+E A KAAGKYRQQGR
Sbjct: 131 DEVRAWTIRKGTKAPQAAGKIHTDFEKGFIMAEVMKYEDFKEEGSENAVKAAGKYRQQGR 190
Query: 211 NYVVEDGDIIFFKFN 167
NY+VEDGDIIFFKFN
Sbjct: 191 NYIVEDGDIIFFKFN 205
>AL136546-1|CAB66481.1| 396|Homo sapiens hypothetical protein
protein.
Length = 396
Score = 305 bits (748), Expect = 1e-82
Identities = 143/195 (73%), Positives = 166/195 (85%), Gaps = 1/195 (0%)
Frame = -2
Query: 748 VDEKKHIRF-GDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIRKKNKWLPKLKEWIDK 572
+D+KK +RF DW+ +IEVLNK+LFLTSKP +YLVNLSEKDYIRKKNKWL K+KEW+DK
Sbjct: 194 IDQKKPVRFYHDWNDKEIEVLNKHLFLTSKPMVYLVNLSEKDYIRKKNKWLIKIKEWVDK 253
Query: 571 NDPGSPLIPFSGVLESKLLDMDPTERVSYLKEHGITSALDKIIVQGYKALQLEYFFTAGA 392
DPG+ +IPFSG LE KL ++ ER YL+ + SAL KII G+ ALQLEYFFTAG
Sbjct: 254 CDPGALVIPFSGALELKLQELSAEERQKYLEANMTQSALPKIIKAGFAALQLEYFFTAGP 313
Query: 391 DEVKAWTIQKGTKAPQAAGRIHTDFEKGFIMAEVMHFKDFKEEGTEAACKAAGKYRQQGR 212
DEV+AWTI+KGTKAPQAAG+IHTDFEKGFIMAEVM ++DFKEEG+E A KAAGKYRQQGR
Sbjct: 314 DEVRAWTIRKGTKAPQAAGKIHTDFEKGFIMAEVMKYEDFKEEGSENAVKAAGKYRQQGR 373
Query: 211 NYVVEDGDIIFFKFN 167
NY+VEDGDIIFFKFN
Sbjct: 374 NYIVEDGDIIFFKFN 388
>BC013925-1|AAH13925.1| 278|Homo sapiens GTPBP9 protein protein.
Length = 278
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/51 (74%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
Frame = -2
Query: 748 VDEKKHIRF-GDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIRKKNKWL 599
+D+KK +RF DW+ +IEVLNK+LFLTSKP +YLVNLSEKDYIRKKNKWL
Sbjct: 194 IDQKKPVRFYHDWNDKEIEVLNKHLFLTSKPMVYLVNLSEKDYIRKKNKWL 244
>BC107864-1|AAI07865.1| 385|Homo sapiens ZC3H13 protein protein.
Length = 385
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -1
Query: 167 RGRRFEGRQ--KEMTRQGSPASSAHAVLQSRHLHSTTRRLSLTIQQ 36
RGR FE ++ ++ R SPA H+ + SRH HS++ + +IQ+
Sbjct: 17 RGRDFERQREKRDKPRSTSPAGQHHSPISSRH-HSSSSQSGSSIQR 61
>BC032425-1|AAH32425.1| 469|Homo sapiens ZC3H13 protein protein.
Length = 469
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -1
Query: 167 RGRRFEGRQ--KEMTRQGSPASSAHAVLQSRHLHSTTRRLSLTIQQ 36
RGR FE ++ ++ R SPA H+ + SRH HS++ + +IQ+
Sbjct: 47 RGRDFERQREKRDKPRSTSPAGQHHSPISSRH-HSSSSQSGSSIQR 91
>AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein
protein.
Length = 1564
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -1
Query: 167 RGRRFEGRQ--KEMTRQGSPASSAHAVLQSRHLHSTTRRLSLTIQQ 36
RGR FE ++ ++ R SPA H+ + SRH HS++ + +IQ+
Sbjct: 300 RGRDFERQREKRDKPRSTSPAGQHHSPISSRH-HSSSSQSGSSIQR 344
>AL831833-1|CAD38544.1| 796|Homo sapiens hypothetical protein
protein.
Length = 796
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -1
Query: 167 RGRRFEGRQ--KEMTRQGSPASSAHAVLQSRHLHSTTRRLSLTIQQ 36
RGR FE ++ ++ R SPA H+ + SRH HS++ + +IQ+
Sbjct: 125 RGRDFERQREKRDKPRSTSPAGQHHSPISSRH-HSSSSQSGSSIQR 169
>AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -1
Query: 167 RGRRFEGRQ--KEMTRQGSPASSAHAVLQSRHLHSTTRRLSLTIQQ 36
RGR FE ++ ++ R SPA H+ + SRH HS++ + +IQ+
Sbjct: 300 RGRDFERQREKRDKPRSTSPAGQHHSPISSRH-HSSSSQSGSSIQR 344
>AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -1
Query: 167 RGRRFEGRQ--KEMTRQGSPASSAHAVLQSRHLHSTTRRLSLTIQQ 36
RGR FE ++ ++ R SPA H+ + SRH HS++ + +IQ+
Sbjct: 300 RGRDFERQREKRDKPRSTSPAGQHHSPISSRH-HSSSSQSGSSIQR 344
>AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -1
Query: 167 RGRRFEGRQ--KEMTRQGSPASSAHAVLQSRHLHSTTRRLSLTIQQ 36
RGR FE ++ ++ R SPA H+ + SRH HS++ + +IQ+
Sbjct: 300 RGRDFERQREKRDKPRSTSPAGQHHSPISSRH-HSSSSQSGSSIQR 344
>AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -1
Query: 167 RGRRFEGRQ--KEMTRQGSPASSAHAVLQSRHLHSTTRRLSLTIQQ 36
RGR FE ++ ++ R SPA H+ + SRH HS++ + +IQ+
Sbjct: 300 RGRDFERQREKRDKPRSTSPAGQHHSPISSRH-HSSSSQSGSSIQR 344
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,677,902
Number of Sequences: 237096
Number of extensions: 2205518
Number of successful extensions: 9468
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9468
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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