Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_C13
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    28   0.25 
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    26   1.3  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   1.8  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    25   1.8  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    25   3.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   7.1  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   7.1  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 19/44 (43%), Positives = 24/44 (54%)
 Frame = +2

Query: 491 VPGTIIGWIEYGIKKLIF*GILQQYPTRISIIA*NICFRKPSTH 622
           +P T +     G K L+F  IL      I+II  NI +RKPSTH
Sbjct: 305 IPSTSLALPLLG-KYLLFTMILVGLSVVITIIILNIHYRKPSTH 347


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 530 KKLIF*GILQQYPTRISIIA*NICFRKPSTH 622
           K ++F  IL  +   +++I  NI FR P TH
Sbjct: 304 KFVLFTMILDTFSICVTVIVLNIHFRSPQTH 334


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 530 KKLIF*GILQQYPTRISIIA*NICFRKPSTH 622
           K LIF  IL      ++++  N+ FR P TH
Sbjct: 308 KYLIFAMILVSISICVTVVVLNVHFRSPQTH 338


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 530 KKLIF*GILQQYPTRISIIA*NICFRKPSTH 622
           K LIF  IL      ++++  N+ FR P TH
Sbjct: 308 KYLIFAMILVSISICVTVVVLNVHFRSPQTH 338


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 431 FLVPHYVKS*IVRILQCTTWVPGTIIGWIE 520
           F+VP  + S    ++  T W  GTI+G I+
Sbjct: 396 FVVPALIISACYAVIVRTIWAKGTILGPID 425


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 586 CLKHMF*KTINTFVQLC*HNSVAWH 660
           CL H+    ++TFVQ+  H +  +H
Sbjct: 11  CLAHLGWSDLDTFVQIKQHYTTKYH 35


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 586 CLKHMF*KTINTFVQLC*HNSVAWH 660
           CL H+    ++TFVQ+  H +  +H
Sbjct: 11  CLAHLGWSDLDTFVQIKQHYTTKYH 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,760
Number of Sequences: 2352
Number of extensions: 11966
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)