Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_C13
         (709 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D26135-1|BAA05132.1|  791|Homo sapiens diacylglycerol kinase gam...    33   1.0  
BC089411-1|AAH89411.1|  766|Homo sapiens diacylglycerol kinase, ...    33   1.0  
AF020945-1|AAC04686.1|  791|Homo sapiens diacylglycerol kinase 3...    33   1.0  
AK056509-1|BAE46616.1|  753|Homo sapiens protein ( Homo sapiens ...    30   7.1  
AF494040-1|AAM12861.1| 4116|Homo sapiens axonemal heavy chain dy...    30   7.1  

>D26135-1|BAA05132.1|  791|Homo sapiens diacylglycerol kinase gamma
           protein.
          Length = 791

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -1

Query: 688 GNNSQCCPRC-AMLRCYANITAQMC*WFSKTY 596
           GN+S  C RC   ++CY ++TA+ C W   T+
Sbjct: 342 GNSSVKCDRCHKSIKCYQSVTARHCVWCRMTF 373


>BC089411-1|AAH89411.1|  766|Homo sapiens diacylglycerol kinase,
           gamma 90kDa protein.
          Length = 766

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -1

Query: 688 GNNSQCCPRC-AMLRCYANITAQMC*WFSKTY 596
           GN+S  C RC   ++CY ++TA+ C W   T+
Sbjct: 342 GNSSVKCDRCHKSIKCYQSVTARHCVWCRMTF 373


>AF020945-1|AAC04686.1|  791|Homo sapiens diacylglycerol kinase 3
           protein.
          Length = 791

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -1

Query: 688 GNNSQCCPRC-AMLRCYANITAQMC*WFSKTY 596
           GN+S  C RC   ++CY ++TA+ C W   T+
Sbjct: 342 GNSSVKCDRCHKSIKCYQSVTARHCVWCRMTF 373


>AK056509-1|BAE46616.1|  753|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31947 fis, clone NT2RP7006995, highly  similar
           to Homo sapiens dynein, axonemal, heavy polypeptide 3
           (DNAH3). ).
          Length = 753

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 567 PQEFQLLLKTYVLENHQHICAVML-A*QRSMAHRGQHWLLFPPKLSY 704
           PQEF  +++ + LE HQ +    +    +    R +HW+ F PK +Y
Sbjct: 353 PQEFWDVIQKHCLEAHQTLLNKWIPTCAQLFTSRKEHWIHFAPKSNY 399


>AF494040-1|AAM12861.1| 4116|Homo sapiens axonemal heavy chain
           dynein type 3 protein.
          Length = 4116

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 567 PQEFQLLLKTYVLENHQHICAVML-A*QRSMAHRGQHWLLFPPKLSY 704
           PQEF  +++ + LE HQ +    +    +    R +HW+ F PK +Y
Sbjct: 382 PQEFWDVIQKHCLEAHQTLLNKWIPTCAQLFTSRKEHWIHFAPKSNY 428


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,430,615
Number of Sequences: 237096
Number of extensions: 1669972
Number of successful extensions: 2244
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2244
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)