Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_C08
(660 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457239-1|CAG33520.1| 153|Homo sapiens P17.3 protein. 63 1e-09
BC010665-1|AAH10665.1| 153|Homo sapiens NDUFB11 protein protein. 63 1e-09
AY359056-1|AAQ89415.1| 153|Homo sapiens AAGL111 protein. 63 1e-09
AL513366-3|CAI41699.1| 153|Homo sapiens NADH dehydrogenase (ubi... 63 1e-09
AK000501-1|BAA91208.1| 153|Homo sapiens protein ( Homo sapiens ... 63 1e-09
AF134476-1|AAP97253.1| 158|Homo sapiens neuronal protein protein. 63 1e-09
AF044213-1|AAL32064.1| 153|Homo sapiens neuronal protein 17.3 p... 63 1e-09
BC107805-1|AAI07806.1| 163|Homo sapiens NADH dehydrogenase (ubi... 51 3e-06
AL513366-2|CAI41698.1| 163|Homo sapiens NADH dehydrogenase (ubi... 51 3e-06
AF251063-1|AAK34953.1| 163|Homo sapiens neuronal protein protein. 51 3e-06
>CR457239-1|CAG33520.1| 153|Homo sapiens P17.3 protein.
Length = 153
Score = 62.9 bits (146), Expect = 1e-09
Identities = 32/86 (37%), Positives = 49/86 (56%)
Frame = -2
Query: 473 DKNWVSYGFDYTSXEEDTNAHHATFFFSVTLCIVFGGVCWAYSPDVHMRDWAQREAFLEL 294
+KN S+G+D + N FFF V++ +V G AY PD M++W++REA +
Sbjct: 68 EKNPDSHGYDKDPVLDVWNMR-LVFFFGVSIILVLGSTFVAYLPDYRMKEWSRREAERLV 126
Query: 293 RRREKAGLPPISPNFIDPKLIKLPDE 216
+ RE GLP + N DP I+LP++
Sbjct: 127 KYREANGLPIMESNCFDPSKIQLPED 152
>BC010665-1|AAH10665.1| 153|Homo sapiens NDUFB11 protein protein.
Length = 153
Score = 62.9 bits (146), Expect = 1e-09
Identities = 32/86 (37%), Positives = 49/86 (56%)
Frame = -2
Query: 473 DKNWVSYGFDYTSXEEDTNAHHATFFFSVTLCIVFGGVCWAYSPDVHMRDWAQREAFLEL 294
+KN S+G+D + N FFF V++ +V G AY PD M++W++REA +
Sbjct: 68 EKNPDSHGYDKDPVLDVWNMR-LVFFFGVSIILVLGSTFVAYLPDYRMKEWSRREAERLV 126
Query: 293 RRREKAGLPPISPNFIDPKLIKLPDE 216
+ RE GLP + N DP I+LP++
Sbjct: 127 KYREANGLPIMESNCFDPSKIQLPED 152
>AY359056-1|AAQ89415.1| 153|Homo sapiens AAGL111 protein.
Length = 153
Score = 62.9 bits (146), Expect = 1e-09
Identities = 32/86 (37%), Positives = 49/86 (56%)
Frame = -2
Query: 473 DKNWVSYGFDYTSXEEDTNAHHATFFFSVTLCIVFGGVCWAYSPDVHMRDWAQREAFLEL 294
+KN S+G+D + N FFF V++ +V G AY PD M++W++REA +
Sbjct: 68 EKNPDSHGYDKDPVLDVWNMR-LVFFFGVSIILVLGSTFVAYLPDYRMKEWSRREAERLV 126
Query: 293 RRREKAGLPPISPNFIDPKLIKLPDE 216
+ RE GLP + N DP I+LP++
Sbjct: 127 KYREANGLPIMESNCFDPSKIQLPED 152
>AL513366-3|CAI41699.1| 153|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 11, 17.3kDa protein.
Length = 153
Score = 62.9 bits (146), Expect = 1e-09
Identities = 32/86 (37%), Positives = 49/86 (56%)
Frame = -2
Query: 473 DKNWVSYGFDYTSXEEDTNAHHATFFFSVTLCIVFGGVCWAYSPDVHMRDWAQREAFLEL 294
+KN S+G+D + N FFF V++ +V G AY PD M++W++REA +
Sbjct: 68 EKNPDSHGYDKDPVLDVWNMR-LVFFFGVSIILVLGSTFVAYLPDYRMKEWSRREAERLV 126
Query: 293 RRREKAGLPPISPNFIDPKLIKLPDE 216
+ RE GLP + N DP I+LP++
Sbjct: 127 KYREANGLPIMESNCFDPSKIQLPED 152
>AK000501-1|BAA91208.1| 153|Homo sapiens protein ( Homo sapiens
cDNA FLJ20494 fis, clone KAT08547. ).
Length = 153
Score = 62.9 bits (146), Expect = 1e-09
Identities = 32/86 (37%), Positives = 49/86 (56%)
Frame = -2
Query: 473 DKNWVSYGFDYTSXEEDTNAHHATFFFSVTLCIVFGGVCWAYSPDVHMRDWAQREAFLEL 294
+KN S+G+D + N FFF V++ +V G AY PD M++W++REA +
Sbjct: 68 EKNPDSHGYDKDPVLDVWNMR-LVFFFGVSIILVLGSTFVAYLPDYRMKEWSRREAERLV 126
Query: 293 RRREKAGLPPISPNFIDPKLIKLPDE 216
+ RE GLP + N DP I+LP++
Sbjct: 127 KYREANGLPIMESNCFDPSKIQLPED 152
>AF134476-1|AAP97253.1| 158|Homo sapiens neuronal protein protein.
Length = 158
Score = 62.9 bits (146), Expect = 1e-09
Identities = 32/86 (37%), Positives = 49/86 (56%)
Frame = -2
Query: 473 DKNWVSYGFDYTSXEEDTNAHHATFFFSVTLCIVFGGVCWAYSPDVHMRDWAQREAFLEL 294
+KN S+G+D + N FFF V++ +V G AY PD M++W++REA +
Sbjct: 73 EKNPDSHGYDKDPVLDVWNMR-LVFFFGVSIILVLGSTFVAYLPDYRMKEWSRREAERLV 131
Query: 293 RRREKAGLPPISPNFIDPKLIKLPDE 216
+ RE GLP + N DP I+LP++
Sbjct: 132 KYREANGLPIMESNCFDPSKIQLPED 157
>AF044213-1|AAL32064.1| 153|Homo sapiens neuronal protein 17.3
protein.
Length = 153
Score = 62.9 bits (146), Expect = 1e-09
Identities = 32/86 (37%), Positives = 49/86 (56%)
Frame = -2
Query: 473 DKNWVSYGFDYTSXEEDTNAHHATFFFSVTLCIVFGGVCWAYSPDVHMRDWAQREAFLEL 294
+KN S+G+D + N FFF V++ +V G AY PD M++W++REA +
Sbjct: 68 EKNPDSHGYDKDPVLDVWNMR-LVFFFGVSIILVLGSTFVAYLPDYRMKEWSRREAERLV 126
Query: 293 RRREKAGLPPISPNFIDPKLIKLPDE 216
+ RE GLP + N DP I+LP++
Sbjct: 127 KYREANGLPIMESNCFDPSKIQLPED 152
>BC107805-1|AAI07806.1| 163|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 11, 17.3kDa protein.
Length = 163
Score = 51.2 bits (117), Expect = 3e-06
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Frame = -2
Query: 473 DKNWVSYGFDYTSXEEDTNAHHATFFFSVTLCIVFGGVCWAYSPDVH----------MRD 324
+KN S+G+D + N FFF V++ +V G AY PD M++
Sbjct: 68 EKNPDSHGYDKDPVLDVWNMR-LVFFFGVSIILVLGSTFVAYLPDYRCTGCPRAWDGMKE 126
Query: 323 WAQREAFLELRRREKAGLPPISPNFIDPKLIKLPDE 216
W++REA ++ RE GLP + N DP I+LP++
Sbjct: 127 WSRREAERLVKYREANGLPIMESNCFDPSKIQLPED 162
>AL513366-2|CAI41698.1| 163|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 11, 17.3kDa protein.
Length = 163
Score = 51.2 bits (117), Expect = 3e-06
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Frame = -2
Query: 473 DKNWVSYGFDYTSXEEDTNAHHATFFFSVTLCIVFGGVCWAYSPDVH----------MRD 324
+KN S+G+D + N FFF V++ +V G AY PD M++
Sbjct: 68 EKNPDSHGYDKDPVLDVWNMR-LVFFFGVSIILVLGSTFVAYLPDYRCTGCPRAWDGMKE 126
Query: 323 WAQREAFLELRRREKAGLPPISPNFIDPKLIKLPDE 216
W++REA ++ RE GLP + N DP I+LP++
Sbjct: 127 WSRREAERLVKYREANGLPIMESNCFDPSKIQLPED 162
>AF251063-1|AAK34953.1| 163|Homo sapiens neuronal protein protein.
Length = 163
Score = 51.2 bits (117), Expect = 3e-06
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Frame = -2
Query: 473 DKNWVSYGFDYTSXEEDTNAHHATFFFSVTLCIVFGGVCWAYSPDVH----------MRD 324
+KN S+G+D + N FFF V++ +V G AY PD M++
Sbjct: 68 EKNPDSHGYDKDPVLDVWNMR-LVFFFGVSIILVLGSTFVAYLPDYRCTGCPRAWDGMKE 126
Query: 323 WAQREAFLELRRREKAGLPPISPNFIDPKLIKLPDE 216
W++REA ++ RE GLP + N DP I+LP++
Sbjct: 127 WSRREAERLVKYREANGLPIMESNCFDPSKIQLPED 162
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,699,015
Number of Sequences: 237096
Number of extensions: 1887620
Number of successful extensions: 3054
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3051
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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