Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_C07
(743 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222564-1|BAD96284.1| 374|Homo sapiens dendritic cell protein ... 101 3e-21
CR450300-1|CAG29296.1| 374|Homo sapiens GA17 protein. 100 5e-21
BC051292-1|AAH51292.1| 374|Homo sapiens eukaryotic translation ... 100 5e-21
BC019103-1|AAH19103.1| 374|Homo sapiens PCI domain containing 1... 100 5e-21
AY769947-1|AAX12524.1| 374|Homo sapiens fetal lung protein B5 p... 100 5e-21
AF277183-1|AAK07542.1| 206|Homo sapiens PNAS-125 protein. 100 5e-21
AF064603-1|AAC17108.1| 374|Homo sapiens GA17 protein protein. 99 1e-20
>AK222564-1|BAD96284.1| 374|Homo sapiens dendritic cell protein
variant protein.
Length = 374
Score = 101 bits (242), Expect = 3e-21
Identities = 45/95 (47%), Positives = 69/95 (72%)
Frame = -2
Query: 742 MRILSFMQMAXTNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSN 563
MR+L+FM MA N +++FD + ELQI DVEAFVI+ ++T++V ++DQ QR V VS+
Sbjct: 277 MRLLTFMGMAVENKEISFDTVQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSH 336
Query: 562 TMHRTFGREQWQQLRDVLLAWRAXVHQAHEAMKSV 458
+ HRTFG++QWQQL D L AW+ +++ ++ S+
Sbjct: 337 STHRTFGKQQWQQLYDTLNAWKQNLNKVKNSLLSL 371
>CR450300-1|CAG29296.1| 374|Homo sapiens GA17 protein.
Length = 374
Score = 100 bits (240), Expect = 5e-21
Identities = 45/95 (47%), Positives = 69/95 (72%)
Frame = -2
Query: 742 MRILSFMQMAXTNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSN 563
MR+L+FM MA N +++FD + ELQI DVEAFVI+ ++T++V ++DQ QR V VS+
Sbjct: 277 MRLLTFMGMAVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSH 336
Query: 562 TMHRTFGREQWQQLRDVLLAWRAXVHQAHEAMKSV 458
+ HRTFG++QWQQL D L AW+ +++ ++ S+
Sbjct: 337 STHRTFGKQQWQQLYDTLNAWKQNLNKVKNSLLSL 371
>BC051292-1|AAH51292.1| 374|Homo sapiens eukaryotic translation
initiation factor 3, subunit M protein.
Length = 374
Score = 100 bits (240), Expect = 5e-21
Identities = 45/95 (47%), Positives = 69/95 (72%)
Frame = -2
Query: 742 MRILSFMQMAXTNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSN 563
MR+L+FM MA N +++FD + ELQI DVEAFVI+ ++T++V ++DQ QR V VS+
Sbjct: 277 MRLLTFMGMAVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSH 336
Query: 562 TMHRTFGREQWQQLRDVLLAWRAXVHQAHEAMKSV 458
+ HRTFG++QWQQL D L AW+ +++ ++ S+
Sbjct: 337 STHRTFGKQQWQQLYDTLNAWKQNLNKVKNSLLSL 371
>BC019103-1|AAH19103.1| 374|Homo sapiens PCI domain containing 1
(herpesvirus entry mediator) protein.
Length = 374
Score = 100 bits (240), Expect = 5e-21
Identities = 45/95 (47%), Positives = 69/95 (72%)
Frame = -2
Query: 742 MRILSFMQMAXTNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSN 563
MR+L+FM MA N +++FD + ELQI DVEAFVI+ ++T++V ++DQ QR V VS+
Sbjct: 277 MRLLTFMGMAVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSH 336
Query: 562 TMHRTFGREQWQQLRDVLLAWRAXVHQAHEAMKSV 458
+ HRTFG++QWQQL D L AW+ +++ ++ S+
Sbjct: 337 STHRTFGKQQWQQLYDTLNAWKQNLNKVKNSLLSL 371
>AY769947-1|AAX12524.1| 374|Homo sapiens fetal lung protein B5
protein.
Length = 374
Score = 100 bits (240), Expect = 5e-21
Identities = 45/95 (47%), Positives = 69/95 (72%)
Frame = -2
Query: 742 MRILSFMQMAXTNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSN 563
MR+L+FM MA N +++FD + ELQI DVEAFVI+ ++T++V ++DQ QR V VS+
Sbjct: 277 MRLLTFMGMAVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSH 336
Query: 562 TMHRTFGREQWQQLRDVLLAWRAXVHQAHEAMKSV 458
+ HRTFG++QWQQL D L AW+ +++ ++ S+
Sbjct: 337 STHRTFGKQQWQQLYDTLNAWKQNLNKVKNSLLSL 371
>AF277183-1|AAK07542.1| 206|Homo sapiens PNAS-125 protein.
Length = 206
Score = 100 bits (240), Expect = 5e-21
Identities = 45/95 (47%), Positives = 69/95 (72%)
Frame = -2
Query: 742 MRILSFMQMAXTNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSN 563
MR+L+FM MA N +++FD + ELQI DVEAFVI+ ++T++V ++DQ QR V VS+
Sbjct: 93 MRLLTFMGMAVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSH 152
Query: 562 TMHRTFGREQWQQLRDVLLAWRAXVHQAHEAMKSV 458
+ HRTFG++QWQQL D L AW+ +++ ++ S+
Sbjct: 153 STHRTFGKQQWQQLYDTLNAWKQNLNKVKNSLLSL 187
>AF064603-1|AAC17108.1| 374|Homo sapiens GA17 protein protein.
Length = 374
Score = 99.1 bits (236), Expect = 1e-20
Identities = 44/95 (46%), Positives = 69/95 (72%)
Frame = -2
Query: 742 MRILSFMQMAXTNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSN 563
MR+L+FM MA N +++FD + ELQI DVEAFVI+ ++T++V ++DQ QR V VS+
Sbjct: 277 MRLLTFMGMAIENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSH 336
Query: 562 TMHRTFGREQWQQLRDVLLAWRAXVHQAHEAMKSV 458
+ HRTFG+++WQQL D L AW+ +++ ++ S+
Sbjct: 337 STHRTFGKQRWQQLYDTLNAWKQNLNKVKNSLLSL 371
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,884,831
Number of Sequences: 237096
Number of extensions: 1308986
Number of successful extensions: 2433
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2433
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -