Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_C07
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70855-1|AAB09161.1|  390|Caenorhabditis elegans Hypothetical pr...    59   4e-09
Z49130-6|CAA88971.1|  387|Caenorhabditis elegans Hypothetical pr...    44   1e-04
U52000-4|AAA96092.1|  107|Caenorhabditis elegans Hypothetical pr...    33   0.21 
U46669-3|AAA85744.2|  737|Caenorhabditis elegans Regulator of g ...    30   1.5  
U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated p...    29   4.6  
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p...    29   4.6  
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p...    29   4.6  
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p...    29   4.6  
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p...    29   4.6  
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr...    29   4.6  
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr...    29   4.6  
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr...    29   4.6  
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.       29   4.6  
Z81563-3|CAB04565.1|  222|Caenorhabditis elegans Hypothetical pr...    28   6.1  
U58753-1|AAC24437.2|  814|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>U70855-1|AAB09161.1|  390|Caenorhabditis elegans Hypothetical
           protein K08F11.3 protein.
          Length = 390

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
 Frame = -2

Query: 742 MRILSFMQMAXTNPDLTFDEIISELQI-EEKDVEAFVIEVLKTRLVRARMDQAQRTVRVS 566
           +R+L+ M +A    +++ DE+  +L I  ++ +E FVI+ ++   +  ++++  RT+ VS
Sbjct: 288 IRLLTLMSLAEEKNEISLDELAKQLDILADETLEEFVIDAIQVNAISGKINEMARTLIVS 347

Query: 565 NTMHRTFGREQWQQLRDVLLAWRAXVHQAHEAMKSV 458
           +  HR FG EQW  L   L    A + Q H  +  V
Sbjct: 348 SYQHRRFGTEQWVLLEKRLKVLIANLKQTHNNVHEV 383


>Z49130-6|CAA88971.1|  387|Caenorhabditis elegans Hypothetical
           protein T06D8.8 protein.
          Length = 387

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
 Frame = -2

Query: 742 MRILSFMQMAXTNP----DLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTV 575
           +R+++ M++A + P     ++F EI ++ QI   +VE  V++ L   L+R  ++Q ++ V
Sbjct: 281 IRLMAVMELAVSRPTKARSVSFKEIATKCQIPFDEVEFLVMKALSKDLIRGDINQVEQVV 340

Query: 574 RVSNTMHRTFGREQWQQLRDVLLAWRAXVH 485
            V+    R     Q  Q+   + AWR  V+
Sbjct: 341 YVTWVQPRVLDNPQIMQMATRISAWRNDVN 370


>U52000-4|AAA96092.1|  107|Caenorhabditis elegans Hypothetical
           protein B0410.1 protein.
          Length = 107

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +2

Query: 50  MTLIPKFRLFKKRAFILLLSKCLHYYFKTPSPSSNYKFM---SFTRHVNTD 193
           M   P+ R F    F L++S C H+++K   PS +  F      T H +T+
Sbjct: 45  MIKCPRMRSFDVGLFFLIVSSCCHFHYKMHIPSKSTNFCQRDKITTHPSTE 95


>U46669-3|AAA85744.2|  737|Caenorhabditis elegans Regulator of g
           protein signalingprotein 6 protein.
          Length = 737

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -1

Query: 233 KYLCLLILKYDCWYRYLRA 177
           +Y  L +LKYDCW R+LR+
Sbjct: 111 QYQILHLLKYDCWPRFLRS 129


>U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated
           protein 44, isoform g protein.
          Length = 1004

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 518 AQLLPLLAPERAVHRVGHADRALRLVHAGAHQTSLQYFNYECFHI 652
           AQ   L  P     R+G+ D  + L+ AGA+  +    NY   HI
Sbjct: 486 AQARELQTPLHIASRLGNTDIVILLLQAGANSNATTRDNYSPLHI 530


>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
           protein 44, isoform a protein.
          Length = 2039

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 518 AQLLPLLAPERAVHRVGHADRALRLVHAGAHQTSLQYFNYECFHI 652
           AQ   L  P     R+G+ D  + L+ AGA+  +    NY   HI
Sbjct: 486 AQARELQTPLHIASRLGNTDIVILLLQAGANSNATTRDNYSPLHI 530


>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
           protein 44, isoform e protein.
          Length = 1841

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 518 AQLLPLLAPERAVHRVGHADRALRLVHAGAHQTSLQYFNYECFHI 652
           AQ   L  P     R+G+ D  + L+ AGA+  +    NY   HI
Sbjct: 486 AQARELQTPLHIASRLGNTDIVILLLQAGANSNATTRDNYSPLHI 530


>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
           protein 44, isoform c protein.
          Length = 1867

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 518 AQLLPLLAPERAVHRVGHADRALRLVHAGAHQTSLQYFNYECFHI 652
           AQ   L  P     R+G+ D  + L+ AGA+  +    NY   HI
Sbjct: 486 AQARELQTPLHIASRLGNTDIVILLLQAGANSNATTRDNYSPLHI 530


>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
           protein 44, isoform f protein.
          Length = 6994

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 518 AQLLPLLAPERAVHRVGHADRALRLVHAGAHQTSLQYFNYECFHI 652
           AQ   L  P     R+G+ D  + L+ AGA+  +    NY   HI
Sbjct: 486 AQARELQTPLHIASRLGNTDIVILLLQAGANSNATTRDNYSPLHI 530


>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
           protein.
          Length = 1815

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 518 AQLLPLLAPERAVHRVGHADRALRLVHAGAHQTSLQYFNYECFHI 652
           AQ   L  P     R+G+ D  + L+ AGA+  +    NY   HI
Sbjct: 486 AQARELQTPLHIASRLGNTDIVILLLQAGANSNATTRDNYSPLHI 530


>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
           protein.
          Length = 1867

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 518 AQLLPLLAPERAVHRVGHADRALRLVHAGAHQTSLQYFNYECFHI 652
           AQ   L  P     R+G+ D  + L+ AGA+  +    NY   HI
Sbjct: 486 AQARELQTPLHIASRLGNTDIVILLLQAGANSNATTRDNYSPLHI 530


>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
           protein.
          Length = 6994

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 518 AQLLPLLAPERAVHRVGHADRALRLVHAGAHQTSLQYFNYECFHI 652
           AQ   L  P     R+G+ D  + L+ AGA+  +    NY   HI
Sbjct: 486 AQARELQTPLHIASRLGNTDIVILLLQAGANSNATTRDNYSPLHI 530


>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
          Length = 1786

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 518 AQLLPLLAPERAVHRVGHADRALRLVHAGAHQTSLQYFNYECFHI 652
           AQ   L  P     R+G+ D  + L+ AGA+  +    NY   HI
Sbjct: 486 AQARELQTPLHIASRLGNTDIVILLLQAGANSNATTRDNYSPLHI 530


>Z81563-3|CAB04565.1|  222|Caenorhabditis elegans Hypothetical
           protein K04H8.3 protein.
          Length = 222

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +2

Query: 536 LAPERAVHRVGHADRALRLVHAGAHQTSLQYFNYECFHIFLFNLKFRYNLIKC 694
           + P RA+ +   A+ +L L      Q +L+Y+N+ C   F  + K    L  C
Sbjct: 84  VVPMRAISKASAAEPSLGLHGITEQQLNLRYYNFICSSHFHLDCKLTETLQIC 136


>U58753-1|AAC24437.2|  814|Caenorhabditis elegans Hypothetical
           protein W03B1.2 protein.
          Length = 814

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
 Frame = -1

Query: 398 LFIIHIAIASDLL-----FCYVITYHKI*VSFSPLQDRNRLGCLNKYLSFN 261
           L +IH++I+  LL     F Y +T+      F  +QD +R+G L     +N
Sbjct: 498 LAVIHVSISRTLLATSNSFLYTVTFQGKFEIFGEVQDEDRIGILLNCSEYN 548


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,362,070
Number of Sequences: 27780
Number of extensions: 238245
Number of successful extensions: 606
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)