Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_C06
         (777 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.        25   2.0  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    24   6.0  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           24   6.0  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    23   8.0  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   8.0  

>AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.
          Length = 182

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 551 YSTTTKKLTRKHLDRYIYS 495
           +  T +K+TR+H DR +Y+
Sbjct: 89  FDATLRKITRRHKDRPVYT 107


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 16  LKAIINYLLRLPSPSININSEDL 84
           L  I+N++ +LPS  + ++S DL
Sbjct: 292 LPNIVNFIAQLPSDELRLSSIDL 314


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 647 TNIKPTSTVANKPGAESTVTAEP 579
           T + PT+T    PG  +T T  P
Sbjct: 49  TTVAPTTTTTVAPGQTTTTTVAP 71


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 555 IYEPLEAVGFSRDRTF 602
           IYE  E +GF +D TF
Sbjct: 413 IYEEREIIGFPKDLTF 428


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = +2

Query: 455 RFKSIIIFVIWMKTNKYIYRDVFASVFLLSLN 550
           RF+     V+W++ +K++++       +L LN
Sbjct: 422 RFEGTYKAVLWLREHKHLFQGKIYEPMILELN 453


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,671
Number of Sequences: 2352
Number of extensions: 14743
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)