Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_C06
         (777 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095031-1|AAM11359.1|  692|Drosophila melanogaster LD18126p pro...    29   9.4  
AE014298-41|AAF45509.2|  692|Drosophila melanogaster CG3156-PA p...    29   9.4  
AE014296-2182|AAF49887.2| 3892|Drosophila melanogaster CG32113-P...    29   9.4  

>AY095031-1|AAM11359.1|  692|Drosophila melanogaster LD18126p
           protein.
          Length = 692

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 231 CKRSSNI*SRAAVKQDSLITRSTSRSEYIGFCLYH 335
           C R +++ +   V++ S I  STS + ++G CL+H
Sbjct: 5   CTRLTHLCTTLRVRKSSQIRLSTSYNHHLGRCLHH 39


>AE014298-41|AAF45509.2|  692|Drosophila melanogaster CG3156-PA
           protein.
          Length = 692

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 231 CKRSSNI*SRAAVKQDSLITRSTSRSEYIGFCLYH 335
           C R +++ +   V++ S I  STS + ++G CL+H
Sbjct: 5   CTRLTHLCTTLRVRKSSQIRLSTSYNHHLGRCLHH 39


>AE014296-2182|AAF49887.2| 3892|Drosophila melanogaster CG32113-PA
           protein.
          Length = 3892

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = -2

Query: 659 DSDVTNIKPTST--VANKPGAESTVTAEPYSLQWFVNHYSTTTKKLTRKHLDRYIYSFSS 486
           D D T + P ST   + K G+ES    E    + F+N        L  K  D+Y+ +F++
Sbjct: 708 DDDETYLTPCSTPPASEKSGSESPTLLENPKTESFLNKNVQLEYVLHNKIYDKYLINFTN 767


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,324,444
Number of Sequences: 53049
Number of extensions: 580403
Number of successful extensions: 1305
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)