Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_B17
         (770 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3CKD9 Cluster: Endoglucanase, putative; n=2; Streptoco...    34   4.5  
UniRef50_Q7RLF9 Cluster: Putative uncharacterized protein PY0258...    33   7.9  

>UniRef50_A3CKD9 Cluster: Endoglucanase, putative; n=2;
           Streptococcus|Rep: Endoglucanase, putative -
           Streptococcus sanguinis (strain SK36)
          Length = 342

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = -3

Query: 492 NFILSNKALF*VYLLNGKVVIFFYDAGYFTSSIYYSCAPNLMAPKVEDQNVY 337
           NF LS + ++  Y L GK  +    AG FT+ ++Y+   N+   K+  QN Y
Sbjct: 267 NFFLSQEKIYAGYTLKGKA-LNSNQAGSFTAPVFYAANNNMEFRKLVQQNKY 317


>UniRef50_Q7RLF9 Cluster: Putative uncharacterized protein PY02585;
           n=6; Plasmodium|Rep: Putative uncharacterized protein
           PY02585 - Plasmodium yoelii yoelii
          Length = 245

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
 Frame = +3

Query: 498 KEKGNRNICTLHDKFQQH*LSHVDYTYSNYSKFRKLKYSFGTN---LKHRKKIGNQYSIS 668
           +EK N  I  +HD          +++YSNY  ++ L   + T+   LK+ +KI N+ +I 
Sbjct: 22  EEKNNLKIRIMHDALN----FSQNFSYSNYLNYQYLSQLYATSMEELKYMEKIVNEINID 77

Query: 669 LN*LHLSFKL 698
           +N  +  FK+
Sbjct: 78  INKKNELFKM 87


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,852,588
Number of Sequences: 1657284
Number of extensions: 11366782
Number of successful extensions: 21051
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21043
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)