Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_B16
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   1.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   5.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.4  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   7.4  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   7.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.7  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -2

Query: 98  VKYSCDYFFQLFGFTEIRYLNVSALSTIYXCI 3
           V +   YF   F    I Y NVS  +  Y C+
Sbjct: 162 VVFDLVYFILAFACISIAYTNVSTDAFFYTCL 193


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = +1

Query: 307 FVTWKSSYKSAICSRYFSW 363
           F  WK S    +C  Y  W
Sbjct: 469 FGPWKPSMHGGVCDPYTPW 487


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +1

Query: 442 SIPHRVNS*TKRSVS*SDRNSAIQTHTNVV*FGSLNCAF 558
           S P + N      V+ S  NS +++H+NV  +   +C++
Sbjct: 256 SKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSY 294


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +1

Query: 442 SIPHRVNS*TKRSVS*SDRNSAIQTHTNVV*FGSLNCAF 558
           S P + N      V+ S  NS +++H+NV  +   +C++
Sbjct: 14  SKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSY 52


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 386 LCAARHKVQEKYLEQIADLYEDFH 315
           L A    VQE  L+++ D+  D H
Sbjct: 11  LIACHKDVQETILQEMRDVLGDIH 34


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 65  KVEKNSHSYISLVM*KHPYQ*FVFN 139
           KVE  +  ++  V  +HPY+ + FN
Sbjct: 144 KVEGAATHHLGSVYSRHPYESWPFN 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,506
Number of Sequences: 336
Number of extensions: 3751
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)