Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_B16
         (702 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11115-12|CAA77452.1|  342|Caenorhabditis elegans Hypothetical p...   174   6e-44
U41029-2|AAL65785.1|  192|Caenorhabditis elegans Hypothetical pr...    79   2e-15
AC006615-4|AAK68233.2|  602|Caenorhabditis elegans Hypothetical ...    31   1.1  
U64852-7|AAB04970.1|  452|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z73972-4|CAA98260.1|  666|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF025453-12|AAK31405.1|  600|Caenorhabditis elegans Hypothetical...    29   4.3  
AC093703-5|AAL00865.1|  725|Caenorhabditis elegans Hypothetical ...    28   5.6  
AC084158-7|AAK68560.1|  929|Caenorhabditis elegans Hypothetical ...    28   7.4  
Z70308-1|CAA94351.1|  213|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z68879-5|CAA93087.2|  188|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U97408-3|AAB93343.1|  339|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U41625-3|AAA83326.1|  264|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AL032653-5|CAC42382.1|  251|Caenorhabditis elegans Hypothetical ...    27   9.8  
AL032653-4|CAA21715.1|  253|Caenorhabditis elegans Hypothetical ...    27   9.8  
AF010240-1|AAB65418.1|  188|Caenorhabditis elegans glutathione S...    27   9.8  

>Z11115-12|CAA77452.1|  342|Caenorhabditis elegans Hypothetical
           protein ZK637.5 protein.
          Length = 342

 Score =  174 bits (423), Expect = 6e-44
 Identities = 84/157 (53%), Positives = 106/157 (67%), Gaps = 5/157 (3%)
 Frame = -2

Query: 689 KLMRLKSKVAPFINQIASLFGLADFNSDMFSNXMDEMLSVIRQVNAQFKDPNQTTFVCVC 510
           K++ L+    P +NQ   +FG+   + +     M   L  ++++NAQFKDPN TTFVCVC
Sbjct: 181 KILSLQGMFGPMMNQFGGMFGMGGGSMNEMIEKMTTTLESVKKMNAQFKDPNCTTFVCVC 240

Query: 509 IAEFLSLYETERLVQELTRCGIDTHNIIVNQLLL-----RSSAPCELCAARHKVQEKYLE 345
           IAEFLSLYETERL+QEL++ GIDTHNIIVNQLL        +  C  CA+R  +Q KYL 
Sbjct: 241 IAEFLSLYETERLIQELSKQGIDTHNIIVNQLLFPDTDANGTVSCRKCASRQAIQSKYLT 300

Query: 344 QIADLYEDFHVTKLPLLEKEVRGASAVNAFSELLLKP 234
            I +LYEDFHV KLPLLE EVRG  A+  FSE ++ P
Sbjct: 301 DIDELYEDFHVVKLPLLEAEVRGGPAILQFSERMVDP 337


>U41029-2|AAL65785.1|  192|Caenorhabditis elegans Hypothetical
           protein F47G3.2 protein.
          Length = 192

 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 39/94 (41%), Positives = 59/94 (62%)
 Frame = -2

Query: 689 KLMRLKSKVAPFINQIASLFGLADFNSDMFSNXMDEMLSVIRQVNAQFKDPNQTTFVCVC 510
           K++ L+  + P +N I  +F + D   +     M   +  + ++NAQFKD N T FVC+C
Sbjct: 39  KILSLQGMLEPMLNNIGGMFEMED--DETLETMMTAAVKDLERMNAQFKDLNCTLFVCIC 96

Query: 509 IAEFLSLYETERLVQELTRCGIDTHNIIVNQLLL 408
           +A+F    + ER +QEL++ G DTHNIIVNQLL+
Sbjct: 97  MADF----QAERHIQELSKQGTDTHNIIVNQLLI 126


>AC006615-4|AAK68233.2|  602|Caenorhabditis elegans Hypothetical
           protein C36B7.6 protein.
          Length = 602

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +1

Query: 256 NAFTAEAPRTSFSSKGSFVTWKSSYKSAICSRYFSWTL 369
           N      PR  FS KGS+V   +     +  RY SW L
Sbjct: 416 NPILGVIPRLKFSDKGSYVESDTKVYDQMAFRYLSWVL 453


>U64852-7|AAB04970.1|  452|Caenorhabditis elegans Hypothetical
           protein W01A11.1 protein.
          Length = 452

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -1

Query: 255 FRTSLEALRSSYILHVKPILSITNVKDVIITN 160
           F+T +E L+  + LHVKP  S  NVK +++ +
Sbjct: 119 FKTEIEGLQVHF-LHVKPPKSYKNVKPILVAH 149


>Z73972-4|CAA98260.1|  666|Caenorhabditis elegans Hypothetical
           protein F15H10.7 protein.
          Length = 666

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 407 RSSAPCELCAARHKVQEKYLEQIADLYE 324
           RS A C     +HK+Q KYLE+  + Y+
Sbjct: 332 RSVASCYDSTPQHKIQLKYLEEFLEKYD 359


>Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical
           protein T21C12.1a protein.
          Length = 1106

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = -2

Query: 314 VTKLPLLEK--EVRGASAVNAFSELLLKPYDPPTSST*NLYFPSPMLRTLLLRTCSI 150
           +T LP LE     R  S  + F+    +P+   T  T NLY P    RT +   C++
Sbjct: 362 LTPLPHLESLPPKRTLSVPSYFNNTTYRPFYSSTDQTSNLYIPESQ-RTTIFSVCTV 417


>AF025453-12|AAK31405.1|  600|Caenorhabditis elegans Hypothetical
          protein C08F1.8 protein.
          Length = 600

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 81 LFFSTFRLHRNKIFKCFSIVNYL 13
          LF  T++LH   I  CFS++N L
Sbjct: 23 LFIYTYQLHNVAILMCFSLINIL 45


>AC093703-5|AAL00865.1|  725|Caenorhabditis elegans Hypothetical
           protein Y20F4.5 protein.
          Length = 725

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 20/91 (21%), Positives = 46/91 (50%)
 Frame = -2

Query: 686 LMRLKSKVAPFINQIASLFGLADFNSDMFSNXMDEMLSVIRQVNAQFKDPNQTTFVCVCI 507
           L+ +K+ ++  +++I SL      + D  S   + M   +  + A   + + T  + V +
Sbjct: 569 LLNVKNAMSR-LSKIMSLSANRLLSDDDISELDESMKEFVEFLQAAHPEESITQKLHVLV 627

Query: 506 AEFLSLYETERLVQELTRCGIDTHNIIVNQL 414
           A  + + +TER +  L+  GI++ + + N+L
Sbjct: 628 AHVVEVAKTERNLGRLSEQGIESLHAVFNRL 658


>AC084158-7|AAK68560.1|  929|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.16 protein.
          Length = 929

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 668 KVAPFINQIASLFGLADFNSDMFSNXMDEMLS 573
           +V PFI  +  LF  A    D+F+N   EM+S
Sbjct: 399 EVDPFIIVMGELFAWASIEHDVFANASREMIS 430


>Z70308-1|CAA94351.1|  213|Caenorhabditis elegans Hypothetical
           protein F49E11.4 protein.
          Length = 213

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -1

Query: 627 TSRFQLGHVQQX--NG*DVISYQTSECTVQRPESNYICVCLY 508
           + RFQ+GH  Q   +    +    S+C V  PE   + VC Y
Sbjct: 131 SQRFQIGHAVQMAWHTTSKVGCGYSKCAVGTPEQTMVVVCRY 172


>Z68879-5|CAA93087.2|  188|Caenorhabditis elegans Hypothetical
           protein K08F4.6 protein.
          Length = 188

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -2

Query: 488 YETERLVQELTRCGIDTHNIIVNQLLLRSSA 396
           YE ER+ +++ +  I  + I +N++LLRS +
Sbjct: 116 YEKERMKRDIVKPAIKNYFIALNKILLRSKS 146


>U97408-3|AAB93343.1|  339|Caenorhabditis elegans Hypothetical
           protein F48A9.1 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 175 RYYYEHVLFDGDVKYKLLVW 116
           RYYYEH L +   K++ L W
Sbjct: 6   RYYYEHSLIEEKTKHQELSW 25


>U41625-3|AAA83326.1|  264|Caenorhabditis elegans Hypothetical
           protein K03A1.4a protein.
          Length = 264

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 650 NQIASLFGLADFNSDMFSNXMDEMLSVIRQVNAQFKDPNQ 531
           +Q+   F + D + D F   M EMLS++R+++ Q   P Q
Sbjct: 202 DQLREQFDMFDKDKDGFIEKM-EMLSIVRELSLQASFPRQ 240


>AL032653-5|CAC42382.1|  251|Caenorhabditis elegans Hypothetical
           protein Y54E5B.3b protein.
          Length = 251

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -2

Query: 446 IDTHNIIVNQL-LLRSSAPCELCAARHKVQEKYLEQIADLYEDF 318
           +D H I +N   L+    P +   +   +QE+ +E+++D+ +DF
Sbjct: 111 VDLHTIFINMHHLINEFRPVQARDSVRILQERQIEELSDICKDF 154


>AL032653-4|CAA21715.1|  253|Caenorhabditis elegans Hypothetical
           protein Y54E5B.3a protein.
          Length = 253

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -2

Query: 446 IDTHNIIVNQL-LLRSSAPCELCAARHKVQEKYLEQIADLYEDF 318
           +D H I +N   L+    P +   +   +QE+ +E+++D+ +DF
Sbjct: 113 VDLHTIFINMHHLINEFRPVQARDSVRILQERQIEELSDICKDF 156


>AF010240-1|AAB65418.1|  188|Caenorhabditis elegans glutathione
           S-transferase protein.
          Length = 188

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -2

Query: 488 YETERLVQELTRCGIDTHNIIVNQLLLRSSA 396
           YE ER+ +++ +  I  + I +N++LLRS +
Sbjct: 116 YEKERMKRDIVKPAIKNYFIALNKILLRSKS 146


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,766,223
Number of Sequences: 27780
Number of extensions: 325985
Number of successful extensions: 801
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)