Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_B15
         (484 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3244|AAF46744.1|  110|Drosophila melanogaster CG10320-P...    66   2e-11
AJ289882-1|CAB96574.2|  959|Drosophila melanogaster dumbfounded ...    28   5.8  
AF196553-1|AAF86308.1|  959|Drosophila melanogaster KIRRE protein.     28   5.8  

>AE013599-3244|AAF46744.1|  110|Drosophila melanogaster CG10320-PA
           protein.
          Length = 110

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 26/43 (60%), Positives = 34/43 (79%)
 Frame = -2

Query: 303 YTVPHYSQFTVKGIPQLDELEKALAVKGLKDPWIRNEAWRYXP 175
           YTVPH S + V+ +PQL E+++AL  +GLKDPW+RNE WRY P
Sbjct: 9   YTVPHASTYKVESVPQLVEVKEALGRQGLKDPWLRNEVWRYEP 51


>AJ289882-1|CAB96574.2|  959|Drosophila melanogaster dumbfounded
           protein.
          Length = 959

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +3

Query: 87  SHCDYCESQSNGKSSKEEFSGSLPASAKSRXDISKP 194
           SH     S S+  SS    SGS  A+A S  D SKP
Sbjct: 42  SHHGDSSSSSSSSSSSSSSSGSSSAAASSANDESKP 77


>AF196553-1|AAF86308.1|  959|Drosophila melanogaster KIRRE protein.
          Length = 959

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +3

Query: 87  SHCDYCESQSNGKSSKEEFSGSLPASAKSRXDISKP 194
           SH     S S+  SS    SGS  A+A S  D SKP
Sbjct: 42  SHHGDSSSSSSSSSSSSSSSGSSSAAASSANDESKP 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,767,809
Number of Sequences: 53049
Number of extensions: 414548
Number of successful extensions: 1279
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)