Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_B15
         (484 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70034-4|CAA93855.1|  103|Caenorhabditis elegans Hypothetical pr...    44   6e-05
Z99709-2|CAB16859.1|  307|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z79754-6|CAB02095.1|  368|Caenorhabditis elegans Hypothetical pr...    27   7.1  

>Z70034-4|CAA93855.1|  103|Caenorhabditis elegans Hypothetical
           protein C18E9.4 protein.
          Length = 103

 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
 Frame = -2

Query: 303 YTVPHYSQFT-VKGIPQLDELEKALAVKGLKDPWIRNEAWRY---XPWIWHSLAESQKIL 136
           + +P+YS ++  +  PQL + EK LA  GLKDPWIRN  + Y    P +    A  +K++
Sbjct: 9   FKIPNYSIYSNFRDFPQLAQHEKRLAQIGLKDPWIRNYVYLYDRKYPHVVGQWAHFKKLI 68

Query: 135 L 133
           L
Sbjct: 69  L 69


>Z99709-2|CAB16859.1|  307|Caenorhabditis elegans Hypothetical
           protein C47B2.2a protein.
          Length = 307

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +1

Query: 244 KLIQLWDTFDSKLGVVRHCVRGPMSVTAHYNNL-NLFHV-RLLLFVYLKRLPFTSHTVIS 417
           +  Q++  F+SK     H   GP   T H + + N   + RL++   L  LPFT HTV +
Sbjct: 109 RFCQIFSDFESKFRYF-HKFPGPKRSTNHSDFVFNADRLMRLVIEECLNHLPFTEHTVTT 167

Query: 418 EEDF 429
              F
Sbjct: 168 PTGF 171


>Z79754-6|CAB02095.1|  368|Caenorhabditis elegans Hypothetical
           protein F25H2.7 protein.
          Length = 368

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = -2

Query: 303 YTVPHYSQFTVKGIPQLDELEKALAVKGLKDPWIRNEAWRYXPWIWHSLAESQK 142
           Y V  +       IP++  LEK       +D W+ N  W    +I+H   + +K
Sbjct: 244 YEVCAHQLIKANRIPEIMILEKG-RFSWARDGWLTNSVWSETDFIFHGWQKKRK 296


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,692,732
Number of Sequences: 27780
Number of extensions: 213793
Number of successful extensions: 608
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)