Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_B12
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 283 1e-76
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 148 6e-36
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 139 3e-33
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 132 4e-31
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 118 5e-27
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 108 4e-24
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 100 3e-21
AY079165-1|AAL86012.1| 585|Caenorhabditis elegans NADPH-depende... 32 0.60
AL132858-12|CAB60480.1| 585|Caenorhabditis elegans Hypothetical... 32 0.60
U23169-6|AAC46695.1| 393|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 7.3
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 7.3
Z70312-5|CAA94384.1| 361|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 28 7.3
U20903-1|AAA84394.1| 361|Caenorhabditis elegans cyclin B protein. 28 7.3
Z81564-5|CAB04569.1| 656|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 28 9.7
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 28 9.7
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 28 9.7
L25598-6|AAA27939.2| 886|Caenorhabditis elegans Hypothetical pr... 28 9.7
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 283 bits (694), Expect = 1e-76
Identities = 126/242 (52%), Positives = 181/242 (74%)
Frame = -2
Query: 767 SSAGFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPA 588
SSAGFDRHITIFSPEGR+YQVEYA KAIN LT+VA++G DAAV+A Q++VPD L+
Sbjct: 5 SSAGFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVAD 64
Query: 587 SVTHLFALTDRIGCVMTGMIADSRSQV*RARYEAANWQYKYGSEIPVHILCRRIADISQV 408
+VT ++ ++ +GC GMI D++ Q+ RA+ EAA+W+YK G ++P +L +++AD++Q
Sbjct: 65 TVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQY 124
Query: 407 YTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLK 228
YTQNAEMR LGC+++ I+YDDE GP VY+ DP+GYY K V+ G K + ++LEKK+K
Sbjct: 125 YTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIK 184
Query: 227 KRSDLSTDDAIQLAISCLSQVLSVDFKSSEIEIGVVSKDNPKFRVLTETEIDRHLTAIAE 48
K+S+L++ +AI+LAI L L +D +S ++E+ VV+KDN KF LT +++ HL IA
Sbjct: 185 KKSELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTKDNSKFTKLTSDQVEHHLNQIAN 244
Query: 47 KD 42
+D
Sbjct: 245 RD 246
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 148 bits (358), Expect = 6e-36
Identities = 85/241 (35%), Positives = 138/241 (57%), Gaps = 3/241 (1%)
Frame = -2
Query: 755 FDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPASVTH 576
+D TIFSPEGRLYQVEYA++AI+ G T + + ++ VVAA+RK +LLD + +T
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAISHAG-TCLGILSSEGIVVAAERKNVHKLLDDSVMTE 63
Query: 575 -LFALTDRIGCVMTGMIADSRSQV*RARYEAANWQYKYGSEIPVHILCRRIADISQVYTQ 399
++ L+D I C + G+ AD+ + R+ AA+++ YG E+PV L + + + Q YTQ
Sbjct: 64 KVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQ 123
Query: 398 NAEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLKKRS 219
RP G S++ I +D G +Y++DPSG Y +KA G+ L+++ K
Sbjct: 124 IGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSP- 182
Query: 218 DLSTDDAIQLAISCLSQVLSVDFKSSEIEIGVVSKDNPK--FRVLTETEIDRHLTAIAEK 45
+ ++A QLAI L + L V S ++E+ V+++ + K LT E+D + +K
Sbjct: 183 --NLEEAKQLAIKVLWKTLDVKLASEKVEMAVLTRRDGKTVLEELTTKEVDALIAEHEKK 240
Query: 44 D 42
+
Sbjct: 241 E 241
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 139 bits (336), Expect = 3e-33
Identities = 81/236 (34%), Positives = 128/236 (54%), Gaps = 2/236 (0%)
Frame = -2
Query: 755 FDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPASVTH 576
+DR ITIFSP+G L+QVEYA +A+ +G T+V +RG D V+ ++K L D ++
Sbjct: 4 YDRAITIFSPDGHLFQVEYAQEAVKKGS-TAVGVRGKDCIVIGVEKKSIPALQDDRTIRK 62
Query: 575 LFALTDRIGCVMTGMIADSRSQV*RARYEAANWQYKYGSEIPVHILCRRIADISQVYTQN 396
+ + D + G+ AD+R V RAR E +++ + V + R IA+ Q +TQ+
Sbjct: 63 IHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQS 122
Query: 395 AEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSD 216
RP G SM++ +D + P ++KT+PSG Y Y A A G YLE++ + +
Sbjct: 123 PGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENT 182
Query: 215 LSTDDAIQLAISCLSQVLSVDFKSSEIEIGVVSKDNPKF--RVLTETEIDRHLTAI 54
+ ++L + L+QV V S IEI V+ K N + RVL+ EI+ L +
Sbjct: 183 VDEATTLKLVVKSLAQV--VPPGSQNIEIAVMKKVNDELQQRVLSTEEIEALLKVV 236
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 132 bits (318), Expect = 4e-31
Identities = 80/228 (35%), Positives = 120/228 (52%), Gaps = 1/228 (0%)
Frame = -2
Query: 743 ITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPASVTHLFAL 564
+T FSP G+L Q+EYAL A+ + G SV LR D V+A + V L D +
Sbjct: 9 LTTFSPSGKLMQIEYALNAV-KNGQPSVGLRAKDGVVLATEN-VGSVLTDDQPKVE--QI 64
Query: 563 TDRIGCVMTGMIADSRSQV*RARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMR 384
+ IGCV +GM D R V +AR A ++ YG E+P L IA + Q YTQ+ +R
Sbjct: 65 SKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVR 124
Query: 383 PLGCSMMLIAYDDEAG-PCVYKTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLST 207
P G S+++ +D G P +++ DPSG Y ++KA A G V+ +LEK+ + +L
Sbjct: 125 PFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFSEALEL-- 182
Query: 206 DDAIQLAISCLSQVLSVDFKSSEIEIGVVSKDNPKFRVLTETEIDRHL 63
DD I A+ L + V + +E+ V + F LT+ ++ HL
Sbjct: 183 DDGIHTALLTLRESFDVGMNENNVEVAVCNSTG--FHRLTKQQVHDHL 228
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 118 bits (284), Expect = 5e-27
Identities = 74/245 (30%), Positives = 139/245 (56%), Gaps = 11/245 (4%)
Frame = -2
Query: 755 FDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPASVTH 576
+DR + FSPEGRL+QVEYA++A+ G TS+ ++ ++ ++AA+++ +L+ ++
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGS-TSIGIKTSEGVLLAAEKRSTSKLMVNDAIEK 66
Query: 575 LFALTDRIGCVMTGMIADSRSQV*RARYEAANWQYKYGSEIPVHILCRRIADISQVYTQN 396
+ + IG G+IADSR+ V RA+ EA N+ + Y +I V + + +A+++ + +
Sbjct: 67 ISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDD 126
Query: 395 ---AEM-RPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLK 228
A M RP G +M+ D E G ++ DPSG + KA + GA + DG A K +
Sbjct: 127 DVKASMSRPFGVAMLFAGVDQE-GAKLFHLDPSGTFIDCKAKSIGAAS-DG-AEQNLKEQ 183
Query: 227 KRSDLSTDDAIQLAISCLSQVLSVDFKSSEIEIGVV-----SKDNP--KFRVLTETEIDR 69
L+ + +++A++ L QV+ S+ +E+ V+ +K P +F ++ E+D+
Sbjct: 184 YHDALTIKEGLKMALAILKQVMEEKLNSANVEVVVIKPTVDAKGRPIGEFTRVSNEELDQ 243
Query: 68 HLTAI 54
+T++
Sbjct: 244 VITSL 248
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 108 bits (260), Expect = 4e-24
Identities = 63/237 (26%), Positives = 118/237 (49%), Gaps = 2/237 (0%)
Frame = -2
Query: 755 FDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLDPASVTH 576
+D +T++SP+GRL+QVEYA++A+ QG T V ++ AV+ A ++ + L +
Sbjct: 6 YDGDVTVWSPQGRLHQVEYAVEAMKQGSAT-VGIKSETHAVIVALKRAQNDL--SSHQKK 62
Query: 575 LFALTDRIGCVMTGMIADSRSQV*RARYEAANWQYKYGSEIPVHILCRRIADISQVYTQN 396
++ + G + G+++D R + E ++W++ Y +P+ L + Q TQ
Sbjct: 63 VYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQY 122
Query: 395 AEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSD 216
RP G +++ YD + G + +TDPS S + GA++ YLE+ +
Sbjct: 123 YGRRPFGVGILIAGYDKD-GAHIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEK 181
Query: 215 LSTDDAIQLAISCLSQVLSVD--FKSSEIEIGVVSKDNPKFRVLTETEIDRHLTAIA 51
+ + I A+ L L + + IG+V KD+P F +L + ++ HL ++
Sbjct: 182 STPEQLIVHALLALRDTLPAEENLNAQNTSIGIVGKDSP-FSLLEDAQVAVHLNQVS 237
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 99.5 bits (237), Expect = 3e-21
Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 3/247 (1%)
Frame = -2
Query: 773 SRSSAGFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLD 594
S G+D + FSP+GR++QVEYA KA++ G T +A+RG + VV A + + +L
Sbjct: 2 SSIGTGYDLAASTFSPDGRIFQVEYAQKAVDNAG-TMIAIRGKNGVVVVADKLISSKLYT 60
Query: 593 PASVTHLFALTDRIGCVMTGMIADSRSQV*RARYEAANWQYKYGSEIPVHILCRRIADIS 414
+ +F + D +G + G D + A EA W Y +P+ + +A+
Sbjct: 61 DNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYI 120
Query: 413 QVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAKTVDGNAYLEKK 234
++T RP G ++++ + G ++ +PSG YKA A G A +EK
Sbjct: 121 HIHTLGIS-RPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEK- 178
Query: 233 LKKRSDLSTDDAIQLAISCLSQVLSVD-FKSSEIEIGVVSKD-NPKF-RVLTETEIDRHL 63
K +L + ++ A + V + K+ +IE+G V + N K+ V +E
Sbjct: 179 -LKIEELDVNQLVKEAARIIMVVRDENKDKNVQIEMGWVGEQTNGKYEEVPSEVVTAAEE 237
Query: 62 TAIAEKD 42
AIA+ D
Sbjct: 238 WAIAKLD 244
>AY079165-1|AAL86012.1| 585|Caenorhabditis elegans NADPH-dependent
flavin reductase protein.
Length = 585
Score = 31.9 bits (69), Expect = 0.60
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +3
Query: 9 HRHCFDLIYPLILFSDCREMSVDFSFS-QHPKLR-IIFADNTNLNLGGLEVDRQHLRQTR 182
HR F +P ILF CR D+ FS + P+L + + + G +V QH
Sbjct: 471 HRSLFSAHFPGILFFGCRSEHHDYYFSDEWPELSGVAVIPAFSRDTDGRKVYVQHKMGEN 530
Query: 183 DGKLNRI--IGAEV 218
GK+ R+ +GA+V
Sbjct: 531 AGKIKRMLDLGAQV 544
>AL132858-12|CAB60480.1| 585|Caenorhabditis elegans Hypothetical
protein Y113G7A.8 protein.
Length = 585
Score = 31.9 bits (69), Expect = 0.60
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +3
Query: 9 HRHCFDLIYPLILFSDCREMSVDFSFS-QHPKLR-IIFADNTNLNLGGLEVDRQHLRQTR 182
HR F +P ILF CR D+ FS + P+L + + + G +V QH
Sbjct: 471 HRSLFSAHFPGILFFGCRSEHHDYYFSDEWPELSGVAVIPAFSRDTDGRKVYVQHKMGEN 530
Query: 183 DGKLNRI--IGAEV 218
GK+ R+ +GA+V
Sbjct: 531 AGKIKRMLDLGAQV 544
>U23169-6|AAC46695.1| 393|Caenorhabditis elegans Hypothetical
protein C29H12.2 protein.
Length = 393
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 731 SPEGRLYQVEYALKAINQGGLTSVALRGTDAAV 633
+PEGRL V YA K I + ++AL GT ++
Sbjct: 250 NPEGRLEDVFYAWKEITEEPTIALALSGTVVSI 282
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 246 ISVSINCLSTSSYSFIGAVVAGGVCFVHTG 335
+ +S+NC S ++ + G+V+ C + TG
Sbjct: 1227 LEISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 246 ISVSINCLSTSSYSFIGAVVAGGVCFVHTG 335
+ +S+NC S ++ + G+V+ C + TG
Sbjct: 1227 LEISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 246 ISVSINCLSTSSYSFIGAVVAGGVCFVHTG 335
+ +S+NC S ++ + G+V+ C + TG
Sbjct: 1227 LEISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 246 ISVSINCLSTSSYSFIGAVVAGGVCFVHTG 335
+ +S+NC S ++ + G+V+ C + TG
Sbjct: 1227 LEISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z70312-5|CAA94384.1| 361|Caenorhabditis elegans Hypothetical
protein ZC168.4 protein.
Length = 361
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -2
Query: 296 SYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSVDFKSSEIE 132
SYK G N Y KL + S+L TDD ++ I+ + Q VD +SE+E
Sbjct: 310 SYKNFKQGKLVAIKNKYQSSKLAQVSNLMTDDVLE-KINRMGQNAKVD--ASEME 361
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -1
Query: 489 GCQLAVQVWVRDT--CAYLMQTHS*YLSSLHPKCRDET 382
G +V+VW +T CA +TH+ +++++HP R T
Sbjct: 100 GTDKSVRVWDMETGTCARRFRTHTDFVNAVHPSRRGVT 137
>U20903-1|AAA84394.1| 361|Caenorhabditis elegans cyclin B protein.
Length = 361
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -2
Query: 296 SYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSVDFKSSEIE 132
SYK G N Y KL + S+L TDD ++ I+ + Q VD +SE+E
Sbjct: 310 SYKNFKQGKLVAIKNKYQSSKLAQVSNLMTDDVLE-KINRMGQNAKVD--ASEME 361
>Z81564-5|CAB04569.1| 656|Caenorhabditis elegans Hypothetical
protein K05C4.5 protein.
Length = 656
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 102 LRIIFADNTNLNLGGLEVDRQHLRQTRDG 188
L ++ DN+ LN+ G++ LR+TR+G
Sbjct: 208 LAMVSTDNSTLNIAGVDPRITELRETRNG 236
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = -2
Query: 215 LSTDDAIQLAISCLSQVLSVDFKSSEIEIGVVSKDNPKFRVLTETE-----IDRHLTAIA 51
+ +++ +L +++V+ + S + V+S + K ++L ETE +DRHLT IA
Sbjct: 1388 VGSEELEELKRKQMNRVMDLQEALSAAQNKVISLEKAKGKLLAETEDARSDVDRHLTVIA 1447
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = -2
Query: 215 LSTDDAIQLAISCLSQVLSVDFKSSEIEIGVVSKDNPKFRVLTETE-----IDRHLTAIA 51
+ +++ +L +++V+ + S + V+S + K ++L ETE +DRHLT IA
Sbjct: 1388 VGSEELEELKRKQMNRVMDLQEALSAAQNKVISLEKAKGKLLAETEDARSDVDRHLTVIA 1447
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = -2
Query: 215 LSTDDAIQLAISCLSQVLSVDFKSSEIEIGVVSKDNPKFRVLTETE-----IDRHLTAIA 51
+ +++ +L +++V+ + S + V+S + K ++L ETE +DRHLT IA
Sbjct: 1388 VGSEELEELKRKQMNRVMDLQEALSAAQNKVISLEKAKGKLLAETEDARSDVDRHLTVIA 1447
>L25598-6|AAA27939.2| 886|Caenorhabditis elegans Hypothetical
protein C06G4.1 protein.
Length = 886
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Frame = -2
Query: 725 EGRLYQVEYA-------LKAINQGGLTSVALRGTDAAVVAAQRKVPDRLLD 594
+ RL ++ YA L+ + +GG T V L+G + AQ+ + D ++D
Sbjct: 558 KARLLEIHYATGCHLIFLEEVKRGGYTYVELKGDPEHIKNAQKMIDDMVID 608
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,782,128
Number of Sequences: 27780
Number of extensions: 356385
Number of successful extensions: 899
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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