Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_B09
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant respons... 35 0.055
U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant respons... 35 0.055
U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant respons... 35 0.055
AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant respo... 35 0.055
Z66497-2|CAD59153.1| 336|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z66497-1|CAA91283.1| 521|Caenorhabditis elegans Hypothetical pr... 29 2.8
U28737-6|AAL02486.1| 566|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF024499-1|AAT48620.1| 941|Caenorhabditis elegans Hypothetical ... 29 4.8
Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical... 28 6.4
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 28 8.4
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 28 8.4
>U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant response
abnormal protein4, isoform a protein.
Length = 445
Score = 35.1 bits (77), Expect = 0.055
Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = -1
Query: 654 KATVKEAIAAVKQDIVRSLASRFTMHCDAL--IDDNLLPEEKICFNEPPR 511
++TVK+AI A+K +VR+L +R +H +++ +++ P+ I ++ PR
Sbjct: 289 RSTVKDAIRAIKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQLPR 338
>U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant response
abnormal protein4, isoform c protein.
Length = 473
Score = 35.1 bits (77), Expect = 0.055
Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = -1
Query: 654 KATVKEAIAAVKQDIVRSLASRFTMHCDAL--IDDNLLPEEKICFNEPPR 511
++TVK+AI A+K +VR+L +R +H +++ +++ P+ I ++ PR
Sbjct: 317 RSTVKDAIRAIKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQLPR 366
>U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant response
abnormal protein4, isoform b protein.
Length = 475
Score = 35.1 bits (77), Expect = 0.055
Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = -1
Query: 654 KATVKEAIAAVKQDIVRSLASRFTMHCDAL--IDDNLLPEEKICFNEPPR 511
++TVK+AI A+K +VR+L +R +H +++ +++ P+ I ++ PR
Sbjct: 319 RSTVKDAIRAIKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQLPR 368
>AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant response
protein ODR-4 protein.
Length = 445
Score = 35.1 bits (77), Expect = 0.055
Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = -1
Query: 654 KATVKEAIAAVKQDIVRSLASRFTMHCDAL--IDDNLLPEEKICFNEPPR 511
++TVK+AI A+K +VR+L +R +H +++ +++ P+ I ++ PR
Sbjct: 289 RSTVKDAIRAIKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQLPR 338
>Z66497-2|CAD59153.1| 336|Caenorhabditis elegans Hypothetical
protein K08F8.1b protein.
Length = 336
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1
Query: 678 SSSVFIYPKATVKEAIAAVKQDIVRSLASRFTMHCDALIDDNLLP--EEKICF 526
S + Y + ++ AV++ +V + + + CD DD+L P + KICF
Sbjct: 55 SEDLIAYGTKHLLDSPTAVQRSLVLNATTSLNIDCDLSSDDDLSPTTQRKICF 107
>Z66497-1|CAA91283.1| 521|Caenorhabditis elegans Hypothetical
protein K08F8.1a protein.
Length = 521
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1
Query: 678 SSSVFIYPKATVKEAIAAVKQDIVRSLASRFTMHCDALIDDNLLP--EEKICF 526
S + Y + ++ AV++ +V + + + CD DD+L P + KICF
Sbjct: 55 SEDLIAYGTKHLLDSPTAVQRSLVLNATTSLNIDCDLSSDDDLSPTTQRKICF 107
>U28737-6|AAL02486.1| 566|Caenorhabditis elegans Hypothetical
protein F14B8.7 protein.
Length = 566
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 359 TSEFDALDRDASSEELLATPQEASQFMY 276
T EFD +DR +S+ +ATP +F Y
Sbjct: 5 TEEFDLIDRTSSNCSTIATPNSKVRFRY 32
>AF024499-1|AAT48620.1| 941|Caenorhabditis elegans Hypothetical
protein F42G2.4a protein.
Length = 941
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 730 NSRVXRMRRQHTF*RCSIVKRFYIPKGDSKRGDRR-SQARYCSFTCFKI 587
N RV + F +C++ +FYI D D+R S++R F +K+
Sbjct: 510 NRRVRSINNNREFRQCTLANQFYIAHPDYGFSDQRNSRSRNAFFLSYKM 558
>Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical
protein W01B6.3 protein.
Length = 484
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 605 RTISCLTAAIASFTVAFGYIKTLDDTTPLKCML 703
+TISC+ I +F++A +KT+D+ L C L
Sbjct: 289 QTISCIFTFIVNFSLASTRLKTIDNRLLLLCGL 321
>AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical
protein Y62E10A.16 protein.
Length = 496
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 201 LNYTIVIMNYNRNKEYEHGKTKSRNIHELARFLWRCQQFLTTCISI 338
L+Y +VI + N Y+ GKT + AR ++R + L T IS+
Sbjct: 404 LHYRLVICDSNGQILYDSGKTTWEMKPDEARTIYRMSEDLATQISV 449
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 557 SSINASQCIVNLEASERTISCLTAAIASFTVAFGYIKTLDDTT 685
S+ NA+QC+V+++A T + ASFT ++K ++ T
Sbjct: 227 STQNAAQCVVSVKAYTSTNNVNITISASFTGNDAFVKLVETRT 269
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 557 SSINASQCIVNLEASERTISCLTAAIASFTVAFGYIKTLDDTT 685
S+ NA+QC+V+++A T + ASFT ++K ++ T
Sbjct: 230 STQNAAQCVVSVKAYTSTNNVNITISASFTGNDAFVKLVETRT 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,961,433
Number of Sequences: 27780
Number of extensions: 319282
Number of successful extensions: 845
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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