Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_A21
(625 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 165 1e-40
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 165 1e-40
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 165 1e-40
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 165 1e-40
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 165 1e-40
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 165 1e-40
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 49 1e-05
BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein. 32 1.4
X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for ... 31 2.5
BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear ribonucle... 31 2.5
BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear ribonucle... 31 2.5
AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear ribonucle... 31 2.5
DQ679757-1|ABG74698.1| 1215|Homo sapiens intersectin 1 short for... 31 4.4
DQ679756-1|ABG74697.1| 1178|Homo sapiens intersectin 1 short for... 31 4.4
DQ679755-1|ABG74696.1| 1149|Homo sapiens intersectin 1 short for... 31 4.4
DQ679754-1|ABG74695.1| 1144|Homo sapiens intersectin 1 short for... 31 4.4
DQ386455-1|ABD72328.1| 1020|Homo sapiens intersectin 1 short for... 31 4.4
DQ340865-1|ABC69037.1| 1076|Homo sapiens intersectin 1 short for... 31 4.4
BX538175-1|CAD98050.1| 627|Homo sapiens hypothetical protein pr... 31 4.4
BC117560-1|AAI17561.1| 1144|Homo sapiens ITSN1 protein protein. 31 4.4
BC116186-1|AAI16187.1| 1721|Homo sapiens intersectin 1 (SH3 doma... 31 4.4
BC116185-1|AAI16186.1| 1716|Homo sapiens ITSN1 protein protein. 31 4.4
BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein. 31 4.4
AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).). 31 4.4
AF114488-1|AAD29953.1| 1220|Homo sapiens intersectin short isofo... 31 4.4
AF114487-1|AAD29952.1| 1721|Homo sapiens intersectin long isofor... 31 4.4
AF064244-1|AAC78611.1| 1721|Homo sapiens intersectin long form p... 31 4.4
AF064243-1|AAC78610.1| 1220|Homo sapiens intersectin short form ... 31 4.4
AK223110-1|BAD96830.1| 255|Homo sapiens small nuclear ribonucle... 30 5.8
BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat tra... 30 7.6
BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat tra... 30 7.6
AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat tra... 30 7.6
AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein. 30 7.6
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 165 bits (401), Expect = 1e-40
Identities = 80/118 (67%), Positives = 99/118 (83%), Gaps = 1/118 (0%)
Frame = -3
Query: 581 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 405
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 404 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRYKDI 231
P+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPR + +
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTL 122
Score = 82.2 bits (194), Expect = 1e-15
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 162 RVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 22
RVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 145 RVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
Score = 50.0 bits (114), Expect = 7e-06
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = -1
Query: 286 PATKPVLLTNKRGHATRTLTSVYDAILEDLVFPAEIVGKRIQ 161
P K ++ +RTLT+V+DAILEDLVFP+EIVGKRI+
Sbjct: 104 PTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIR 145
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 165 bits (401), Expect = 1e-40
Identities = 80/118 (67%), Positives = 99/118 (83%), Gaps = 1/118 (0%)
Frame = -3
Query: 581 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 405
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 3 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 62
Query: 404 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRYKDI 231
P+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPR + +
Sbjct: 63 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTL 120
Score = 82.2 bits (194), Expect = 1e-15
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 162 RVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 22
RVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 143 RVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 189
Score = 50.0 bits (114), Expect = 7e-06
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = -1
Query: 286 PATKPVLLTNKRGHATRTLTSVYDAILEDLVFPAEIVGKRIQ 161
P K ++ +RTLT+V+DAILEDLVFP+EIVGKRI+
Sbjct: 102 PTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIR 143
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 165 bits (401), Expect = 1e-40
Identities = 80/118 (67%), Positives = 99/118 (83%), Gaps = 1/118 (0%)
Frame = -3
Query: 581 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 405
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 404 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRYKDI 231
P+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPR + +
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTL 122
Score = 82.2 bits (194), Expect = 1e-15
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 162 RVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 22
RVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 145 RVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
Score = 50.0 bits (114), Expect = 7e-06
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = -1
Query: 286 PATKPVLLTNKRGHATRTLTSVYDAILEDLVFPAEIVGKRIQ 161
P K ++ +RTLT+V+DAILEDLVFP+EIVGKRI+
Sbjct: 104 PTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIR 145
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 165 bits (401), Expect = 1e-40
Identities = 80/118 (67%), Positives = 99/118 (83%), Gaps = 1/118 (0%)
Frame = -3
Query: 581 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 405
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 404 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRYKDI 231
P+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPR + +
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTL 122
Score = 82.2 bits (194), Expect = 1e-15
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 162 RVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 22
RVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 145 RVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
Score = 50.0 bits (114), Expect = 7e-06
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = -1
Query: 286 PATKPVLLTNKRGHATRTLTSVYDAILEDLVFPAEIVGKRIQ 161
P K ++ +RTLT+V+DAILEDLVFP+EIVGKRI+
Sbjct: 104 PTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIR 145
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 165 bits (401), Expect = 1e-40
Identities = 80/118 (67%), Positives = 99/118 (83%), Gaps = 1/118 (0%)
Frame = -3
Query: 581 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 405
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 404 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRYKDI 231
P+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPR + +
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTL 122
Score = 82.2 bits (194), Expect = 1e-15
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 162 RVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 22
RVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 145 RVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
Score = 50.0 bits (114), Expect = 7e-06
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = -1
Query: 286 PATKPVLLTNKRGHATRTLTSVYDAILEDLVFPAEIVGKRIQ 161
P K ++ +RTLT+V+DAILEDLVFP+EIVGKRI+
Sbjct: 104 PTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIR 145
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 165 bits (401), Expect = 1e-40
Identities = 80/118 (67%), Positives = 99/118 (83%), Gaps = 1/118 (0%)
Frame = -3
Query: 581 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 405
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 404 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRYKDI 231
P+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPR + +
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTL 122
Score = 82.2 bits (194), Expect = 1e-15
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 162 RVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 22
RVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 145 RVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
Score = 50.0 bits (114), Expect = 7e-06
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = -1
Query: 286 PATKPVLLTNKRGHATRTLTSVYDAILEDLVFPAEIVGKRIQ 161
P K ++ +RTLT+V+DAILEDLVFP+EIVGKRI+
Sbjct: 104 PTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIR 145
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/27 (81%), Positives = 27/27 (100%)
Frame = -1
Query: 241 TRTLTSVYDAILEDLVFPAEIVGKRIQ 161
+RTLT+V+DAILEDLVFP+EIVGKRI+
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIR 36
Score = 47.6 bits (108), Expect = 4e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = -2
Query: 162 RVKLDGSQLIKVHLDKNQQTTIEHKV 85
RVKLDGS+LIKVHLDK QQ +EHKV
Sbjct: 36 RVKLDGSRLIKVHLDKAQQNNVEHKV 61
>BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein.
Length = 648
Score = 32.3 bits (70), Expect = 1.4
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = -3
Query: 617 GRCFPSRKVVKMSTKIIKASGAEADSFET-------------SISQALVELETNSDLKAQ 477
GR P ++++ K ++ + DS T + L E+E + K Q
Sbjct: 539 GRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQ 598
Query: 476 LRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 339
+++ + KE+ E+HNK+ + M + QK Q R + ELEKK
Sbjct: 599 EIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKK 645
>X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for U2
snRNP-specific A' protein. ).
Length = 255
Score = 31.5 bits (68), Expect = 2.5
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = -3
Query: 524 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 357
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 356 RELEKKFSGK 327
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 31.5 bits (68), Expect = 2.5
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = -3
Query: 524 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 357
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 356 RELEKKFSGK 327
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 31.5 bits (68), Expect = 2.5
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = -3
Query: 524 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 357
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 356 RELEKKFSGK 327
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 31.5 bits (68), Expect = 2.5
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = -3
Query: 524 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 357
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 356 RELEKKFSGK 327
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>DQ679757-1|ABG74698.1| 1215|Homo sapiens intersectin 1 short form
variant 5 protein.
Length = 1215
Score = 30.7 bits (66), Expect = 4.4
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = -3
Query: 617 GRCFPSRKVVKMSTKIIKASGAEADSFET-------------SISQALVELETNSDLKAQ 477
GR P ++++ K ++ + DS T + L E+E + K Q
Sbjct: 539 GRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQ 598
Query: 476 LRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 339
+++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 599 EIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>DQ679756-1|ABG74697.1| 1178|Homo sapiens intersectin 1 short form
variant 2 protein.
Length = 1178
Score = 30.7 bits (66), Expect = 4.4
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = -3
Query: 617 GRCFPSRKVVKMSTKIIKASGAEADSFET-------------SISQALVELETNSDLKAQ 477
GR P ++++ K ++ + DS T + L E+E + K Q
Sbjct: 502 GRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQ 561
Query: 476 LRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 339
+++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 562 EIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 608
>DQ679755-1|ABG74696.1| 1149|Homo sapiens intersectin 1 short form
variant 7 protein.
Length = 1149
Score = 30.7 bits (66), Expect = 4.4
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = -3
Query: 617 GRCFPSRKVVKMSTKIIKASGAEADSFET-------------SISQALVELETNSDLKAQ 477
GR P ++++ K ++ + DS T + L E+E + K Q
Sbjct: 539 GRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQ 598
Query: 476 LRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 339
+++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 599 EIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>DQ679754-1|ABG74695.1| 1144|Homo sapiens intersectin 1 short form
variant 6 protein.
Length = 1144
Score = 30.7 bits (66), Expect = 4.4
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = -3
Query: 617 GRCFPSRKVVKMSTKIIKASGAEADSFET-------------SISQALVELETNSDLKAQ 477
GR P ++++ K ++ + DS T + L E+E + K Q
Sbjct: 539 GRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQ 598
Query: 476 LRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 339
+++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 599 EIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>DQ386455-1|ABD72328.1| 1020|Homo sapiens intersectin 1 short form
transcript variant 8 protein.
Length = 1020
Score = 30.7 bits (66), Expect = 4.4
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = -3
Query: 617 GRCFPSRKVVKMSTKIIKASGAEADSFET-------------SISQALVELETNSDLKAQ 477
GR P ++++ K ++ + DS T + L E+E + K Q
Sbjct: 539 GRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQ 598
Query: 476 LRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 339
+++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 599 EIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>DQ340865-1|ABC69037.1| 1076|Homo sapiens intersectin 1 short form
protein.
Length = 1076
Score = 30.7 bits (66), Expect = 4.4
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = -3
Query: 617 GRCFPSRKVVKMSTKIIKASGAEADSFET-------------SISQALVELETNSDLKAQ 477
GR P ++++ K ++ + DS T + L E+E + K Q
Sbjct: 537 GRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQ 596
Query: 476 LRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 339
+++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 597 EIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 643
>BX538175-1|CAD98050.1| 627|Homo sapiens hypothetical protein
protein.
Length = 627
Score = 30.7 bits (66), Expect = 4.4
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = -3
Query: 617 GRCFPSRKVVKMSTKIIKASGAEADSFET-------------SISQALVELETNSDLKAQ 477
GR P ++++ K ++ + DS T + L E+E + K Q
Sbjct: 394 GRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQ 453
Query: 476 LRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 339
+++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 454 EIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 500
>BC117560-1|AAI17561.1| 1144|Homo sapiens ITSN1 protein protein.
Length = 1144
Score = 30.7 bits (66), Expect = 4.4
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = -3
Query: 617 GRCFPSRKVVKMSTKIIKASGAEADSFET-------------SISQALVELETNSDLKAQ 477
GR P ++++ K ++ + DS T + L E+E + K Q
Sbjct: 539 GRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQ 598
Query: 476 LRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 339
+++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 599 EIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>BC116186-1|AAI16187.1| 1721|Homo sapiens intersectin 1 (SH3 domain
protein) protein.
Length = 1721
Score = 30.7 bits (66), Expect = 4.4
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = -3
Query: 617 GRCFPSRKVVKMSTKIIKASGAEADSFET-------------SISQALVELETNSDLKAQ 477
GR P ++++ K ++ + DS T + L E+E + K Q
Sbjct: 539 GRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQ 598
Query: 476 LRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 339
+++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 599 EIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>BC116185-1|AAI16186.1| 1716|Homo sapiens ITSN1 protein protein.
Length = 1716
Score = 30.7 bits (66), Expect = 4.4
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = -3
Query: 617 GRCFPSRKVVKMSTKIIKASGAEADSFET-------------SISQALVELETNSDLKAQ 477
GR P ++++ K ++ + DS T + L E+E + K Q
Sbjct: 539 GRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQ 598
Query: 476 LRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 339
+++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 599 EIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein.
Length = 440
Score = 30.7 bits (66), Expect = 4.4
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = -3
Query: 569 IKASGAEADSFETSISQALVEL-ETNSDLKAQLRELYITKAKEIE--LHNK-KSI-IIYV 405
+K E D+ + Q L E E + K +L + Y + E+E H K K I +I+
Sbjct: 85 LKKQDQEKDNMIEKLKQQLNETKEKAQEEKDKLEQKYTRQINELEGQFHQKAKEIGMIHT 144
Query: 404 PMPKLKAFQKIQIRLVRELE 345
+ ++ FQK +I++ REL+
Sbjct: 145 ELKAVRQFQKRKIQVERELD 164
>AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).).
Length = 255
Score = 30.7 bits (66), Expect = 4.4
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = -3
Query: 515 LVELETNSDLKAQLREL-YITKAKEIELHNK--KSIIIY-VPMPKLKAFQKIQIRLVREL 348
LVEL + D A L+ L Y++ + + + K + +IY VP ++ FQK++++ +E
Sbjct: 100 LVELG-DLDPLASLKSLTYLSILRNLVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEA 158
Query: 347 EKKFSGK 327
EK F GK
Sbjct: 159 EKMFKGK 165
>AF114488-1|AAD29953.1| 1220|Homo sapiens intersectin short isoform
protein.
Length = 1220
Score = 30.7 bits (66), Expect = 4.4
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = -3
Query: 617 GRCFPSRKVVKMSTKIIKASGAEADSFET-------------SISQALVELETNSDLKAQ 477
GR P ++++ K ++ + DS T + L E+E + K Q
Sbjct: 539 GRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQ 598
Query: 476 LRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 339
+++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 599 EIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AF114487-1|AAD29952.1| 1721|Homo sapiens intersectin long isoform
protein.
Length = 1721
Score = 30.7 bits (66), Expect = 4.4
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = -3
Query: 617 GRCFPSRKVVKMSTKIIKASGAEADSFET-------------SISQALVELETNSDLKAQ 477
GR P ++++ K ++ + DS T + L E+E + K Q
Sbjct: 539 GRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQ 598
Query: 476 LRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 339
+++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 599 EIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AF064244-1|AAC78611.1| 1721|Homo sapiens intersectin long form
protein.
Length = 1721
Score = 30.7 bits (66), Expect = 4.4
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = -3
Query: 617 GRCFPSRKVVKMSTKIIKASGAEADSFET-------------SISQALVELETNSDLKAQ 477
GR P ++++ K ++ + DS T + L E+E + K Q
Sbjct: 539 GRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQ 598
Query: 476 LRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 339
+++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 599 EIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AF064243-1|AAC78610.1| 1220|Homo sapiens intersectin short form
protein.
Length = 1220
Score = 30.7 bits (66), Expect = 4.4
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = -3
Query: 617 GRCFPSRKVVKMSTKIIKASGAEADSFET-------------SISQALVELETNSDLKAQ 477
GR P ++++ K ++ + DS T + L E+E + K Q
Sbjct: 539 GRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQ 598
Query: 476 LRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 339
+++ + KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 599 EIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AK223110-1|BAD96830.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 30.3 bits (65), Expect = 5.8
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = -3
Query: 524 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 357
+ +LVEL + D A L+ L + NKK +YV P ++ FQ+++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQRVKLKER 155
Query: 356 RELEKKFSGK 327
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2
Query: 144 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 61
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2
Query: 144 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 61
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat
transmembrane neuronal 2 protein protein.
Length = 516
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2
Query: 144 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 61
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein.
Length = 529
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2
Query: 144 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 61
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 98 SQLTWLHLDHNQISTV--KEDAFQGLYK 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,070,472
Number of Sequences: 237096
Number of extensions: 1942051
Number of successful extensions: 4036
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4030
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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