Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_A21
         (625 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    26   0.34 
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    21   7.4  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   7.4  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    21   7.4  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   7.4  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   7.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.8  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -3

Query: 545 DSFETSISQALVELETNSDLKAQLRE 468
           ++  T++S AL EL  N D++ +LRE
Sbjct: 307 ETSSTTMSNALYELALNQDVQKKLRE 332


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +3

Query: 519 LRDRGLEGIRLSTARFDDLRTHLDNFTGGKAS 614
           L D+G EGI+++      ++  +     GK++
Sbjct: 102 LSDKGPEGIQINATELQKIKLEIHRDLPGKST 133


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +3

Query: 519 LRDRGLEGIRLSTARFDDLRTHLDNFTGGKAS 614
           L D+G EGI+++      ++  +     GK++
Sbjct: 102 LSDKGPEGIQINATELQKIKLEIHRDLPGKST 133


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +3

Query: 519 LRDRGLEGIRLSTARFDDLRTHLDNFTGGKAS 614
           L D+G EGI+++      ++  +     GK++
Sbjct: 102 LSDKGPEGIQINATELQKIKLEIHRDLPGKST 133


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +3

Query: 519 LRDRGLEGIRLSTARFDDLRTHLDNFTGGKAS 614
           L D+G EGI+++      ++  +     GK++
Sbjct: 102 LSDKGPEGIQINATELQKIKLEIHRDLPGKST 133


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 73  VCIQEANGTRSYLRVPRTLFVNL 5
           VC++   G + YLR+     +NL
Sbjct: 163 VCLENCTGYQQYLRLLEVPQINL 185


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -1

Query: 235 TLTSVYDAILEDLVFPAEIVGKRIQGQVGRL 143
           T+T  Y     +LVF A++  +     +GR+
Sbjct: 100 TVTGTYQLTETELVFGAKLAWRNATRCIGRI 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,244
Number of Sequences: 438
Number of extensions: 3260
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)