Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_A14
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation fa... 82 5e-16
AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation fa... 80 2e-15
AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation fa... 80 2e-15
AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical... 60 2e-09
AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical... 60 2e-09
AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation i... 60 2e-09
Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical pr... 58 9e-09
U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation fact... 52 4e-07
U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation fact... 47 1e-05
AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation i... 47 1e-05
AL132876-5|CAC48119.1| 576|Caenorhabditis elegans Hypothetical ... 29 2.8
AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical ... 28 8.7
>AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform a protein.
Length = 248
Score = 81.8 bits (193), Expect = 5e-16
Identities = 39/95 (41%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Frame = -1
Query: 783 EKKXRFTDLDRFWLDVVLLLXGENF-ENSDEICGAVVNVRPKVDKIAIWTADAMKQHATI 607
+K+ R LD +WL++++ + GE F E D ICGAVVNVR K DK+++WT DA + +
Sbjct: 113 DKQRRTQLLDHYWLELLMAIVGEQFDEYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNL 172
Query: 606 EIGKKLKEQLGIHGK--IGFQVHRDTMVKHSSATK 508
IG+ LK++L I + ++VH+D+ + SS K
Sbjct: 173 RIGQVLKQKLSIPDTEILRYEVHKDSSARTSSTVK 207
>AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform b protein.
Length = 251
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = -1
Query: 759 LDRFWLDVVLLLXGENF-ENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE 583
LD +WL++++ + GE F E D ICGAVVNVR K DK+++WT DA + + IG+ LK+
Sbjct: 124 LDHYWLELLMAIVGEQFDEYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQ 183
Query: 582 QLGIHGK--IGFQVHRDTMVKHSSATK 508
+L I + ++VH+D+ + SS K
Sbjct: 184 KLSIPDTEILRYEVHKDSSARTSSTVK 210
>AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform c protein.
Length = 250
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = -1
Query: 759 LDRFWLDVVLLLXGENF-ENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE 583
LD +WL++++ + GE F E D ICGAVVNVR K DK+++WT DA + + IG+ LK+
Sbjct: 123 LDHYWLELLMAIVGEQFDEYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQ 182
Query: 582 QLGIHGK--IGFQVHRDTMVKHSSATK 508
+L I + ++VH+D+ + SS K
Sbjct: 183 KLSIPDTEILRYEVHKDSSARTSSTVK 209
>AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical
protein Y57A10A.30b protein.
Length = 201
Score = 59.7 bits (138), Expect = 2e-09
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Frame = -1
Query: 759 LDRFWLDVVLLLXGENF-ENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE 583
LD WL+++L L GE F ++ + ICG V NVR + KI++WT + + IG LKE
Sbjct: 98 LDAVWLEILLALIGEQFGKDMESICGLVCNVRGQGSKISVWTKNCNDDDTNMRIGVVLKE 157
Query: 582 QL-----GIHGK-----IGFQVHRDTMVKHSSATKNLYTV 493
+L H K I +Q HR+ + K +SA K +++
Sbjct: 158 KLMAAASKAHSKPLFDVIHYQTHRNCVKKTTSALKYKFSL 197
>AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical
protein Y57A10A.30a protein.
Length = 240
Score = 59.7 bits (138), Expect = 2e-09
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Frame = -1
Query: 759 LDRFWLDVVLLLXGENF-ENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE 583
LD WL+++L L GE F ++ + ICG V NVR + KI++WT + + IG LKE
Sbjct: 137 LDAVWLEILLALIGEQFGKDMESICGLVCNVRGQGSKISVWTKNCNDDDTNMRIGVVLKE 196
Query: 582 QL-----GIHGK-----IGFQVHRDTMVKHSSATKNLYTV 493
+L H K I +Q HR+ + K +SA K +++
Sbjct: 197 KLMAAASKAHSKPLFDVIHYQTHRNCVKKTTSALKYKFSL 236
>AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 5 protein.
Length = 201
Score = 59.7 bits (138), Expect = 2e-09
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Frame = -1
Query: 759 LDRFWLDVVLLLXGENF-ENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE 583
LD WL+++L L GE F ++ + ICG V NVR + KI++WT + + IG LKE
Sbjct: 98 LDAVWLEILLALIGEQFGKDMESICGLVCNVRGQGSKISVWTKNCNDDDTNMRIGVVLKE 157
Query: 582 QL-----GIHGK-----IGFQVHRDTMVKHSSATKNLYTV 493
+L H K I +Q HR+ + K +SA K +++
Sbjct: 158 KLMAAASKAHSKPLFDVIHYQTHRNCVKKTTSALKYKFSL 197
>Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical
protein F53A2.6 protein.
Length = 212
Score = 57.6 bits (133), Expect = 9e-09
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = -1
Query: 759 LDRFWLDVVLLLXGENF-ENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE 583
+D WL++++ L GE F ++ + ICG V NVR K KI++WT D + IG LKE
Sbjct: 101 VDAIWLEILMALVGEQFGKDMESICGLVCNVRGKGSKISVWTKDCNDDETNMRIGVVLKE 160
Query: 582 QL 577
+L
Sbjct: 161 KL 162
>U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 2 protein.
Length = 228
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = -1
Query: 759 LDRFWLDVVLLLXGENFENSDE-ICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE 583
+D W ++++ + GE F + E +CG V NVR K KI++WT ++ A + IG LK+
Sbjct: 106 MDTIWTEILMAMIGEQFSDDIESLCGIVCNVRGKGSKISVWTTNSADDGANLRIGGVLKQ 165
Query: 582 QL 577
L
Sbjct: 166 VL 167
>U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 4 protein.
Length = 212
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = -1
Query: 753 RFWLDVVLLLXGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE--Q 580
R W ++++ + GE F DE+CGAV ++R + D I++W +A T I + L+ Q
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQ 181
Query: 579 LGIHGKIGFQVHRDTMVKHSS---ATKNL 502
L + + ++ H D + SS TKN+
Sbjct: 182 LPQNTVLEYKRHDDCLRDQSSYRHTTKNI 210
>AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 4 protein.
Length = 212
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = -1
Query: 753 RFWLDVVLLLXGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE--Q 580
R W ++++ + GE F DE+CGAV ++R + D I++W +A T I + L+ Q
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQ 181
Query: 579 LGIHGKIGFQVHRDTMVKHSS---ATKNL 502
L + + ++ H D + SS TKN+
Sbjct: 182 LPQNTVLEYKRHDDCLRDQSSYRHTTKNI 210
>AL132876-5|CAC48119.1| 576|Caenorhabditis elegans Hypothetical
protein Y105E8A.5 protein.
Length = 576
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 471 KICNAKTKQCIDSWSQNYA*PLCLCVLGNQSCRVSLAVLSVFS 599
KI N+ T CI +++ A PL + V+G + C + L F+
Sbjct: 180 KIANSATITCIAKLTKSTAEPLDILVIGTEHCEIFLIDSQAFT 222
>AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical
protein T05E7.3 protein.
Length = 997
Score = 27.9 bits (59), Expect = 8.7
Identities = 25/89 (28%), Positives = 38/89 (42%)
Frame = -1
Query: 780 KKXRFTDLDRFWLDVVLLLXGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEI 601
K RF++ W DV + +F+ D I K+ I T+ ++ H T+E+
Sbjct: 740 KASRFSESSLSWKDVKMSKTVLSFDVFDRI--------EKIVPFHILTS--IETHITVEL 789
Query: 600 GKKLKEQLGIHGKIGFQVHRDTMVKHSSA 514
K L E + KIG + V H SA
Sbjct: 790 EKMLIEYISNARKIGVSFNLQNSVTHESA 818
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,355,442
Number of Sequences: 27780
Number of extensions: 293458
Number of successful extensions: 609
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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