Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_A12
         (771 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   228   6e-60
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   228   6e-60
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   228   6e-60
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   228   6e-60
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   228   6e-60
BT021294-1|AAX33442.1|  620|Drosophila melanogaster RE26627p pro...    33   0.33 
AE014297-2149|AAN13698.1|  552|Drosophila melanogaster CG32855-P...    33   0.33 

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  228 bits (558), Expect = 6e-60
 Identities = 104/129 (80%), Positives = 113/129 (87%)
 Frame = -2

Query: 770 VRVIAHTQMXLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDC 591
           +RVIAH+Q+ L+KQRQKKAH+MEIQLNGG+IEDKVKWAREHLEKPI V +VF QDEMIDC
Sbjct: 171 IRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDC 230

Query: 590 IXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTE 411
           +           TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE
Sbjct: 231 VGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTE 290

Query: 410 MNKKIYRIG 384
           +NKKIYRIG
Sbjct: 291 INKKIYRIG 299



 Score =  189 bits (460), Expect = 4e-48
 Identities = 87/101 (86%), Positives = 92/101 (91%)
 Frame = -3

Query: 379 GIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRK 200
           GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRK
Sbjct: 301 GIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRK 360

Query: 199 SLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAALHG 77
           SL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK A  G
Sbjct: 361 SLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMG 401


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  228 bits (558), Expect = 6e-60
 Identities = 104/129 (80%), Positives = 113/129 (87%)
 Frame = -2

Query: 770 VRVIAHTQMXLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDC 591
           +RVIAH+Q+ L+KQRQKKAH+MEIQLNGG+IEDKVKWAREHLEKPI V +VF QDEMIDC
Sbjct: 160 IRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDC 219

Query: 590 IXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTE 411
           +           TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE
Sbjct: 220 VGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTE 279

Query: 410 MNKKIYRIG 384
           +NKKIYRIG
Sbjct: 280 INKKIYRIG 288



 Score =  189 bits (460), Expect = 4e-48
 Identities = 87/101 (86%), Positives = 92/101 (91%)
 Frame = -3

Query: 379 GIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRK 200
           GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRK
Sbjct: 290 GIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRK 349

Query: 199 SLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAALHG 77
           SL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK A  G
Sbjct: 350 SLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMG 390


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  228 bits (558), Expect = 6e-60
 Identities = 104/129 (80%), Positives = 113/129 (87%)
 Frame = -2

Query: 770 VRVIAHTQMXLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDC 591
           +RVIAH+Q+ L+KQRQKKAH+MEIQLNGG+IEDKVKWAREHLEKPI V +VF QDEMIDC
Sbjct: 147 IRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDC 206

Query: 590 IXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTE 411
           +           TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE
Sbjct: 207 VGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTE 266

Query: 410 MNKKIYRIG 384
           +NKKIYRIG
Sbjct: 267 INKKIYRIG 275



 Score =  189 bits (460), Expect = 4e-48
 Identities = 87/101 (86%), Positives = 92/101 (91%)
 Frame = -3

Query: 379 GIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRK 200
           GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRK
Sbjct: 277 GIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRK 336

Query: 199 SLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAALHG 77
           SL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK A  G
Sbjct: 337 SLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMG 377


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  228 bits (558), Expect = 6e-60
 Identities = 104/129 (80%), Positives = 113/129 (87%)
 Frame = -2

Query: 770 VRVIAHTQMXLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDC 591
           +RVIAH+Q+ L+KQRQKKAH+MEIQLNGG+IEDKVKWAREHLEKPI V +VF QDEMIDC
Sbjct: 147 IRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDC 206

Query: 590 IXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTE 411
           +           TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE
Sbjct: 207 VGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTE 266

Query: 410 MNKKIYRIG 384
           +NKKIYRIG
Sbjct: 267 INKKIYRIG 275



 Score =  189 bits (460), Expect = 4e-48
 Identities = 87/101 (86%), Positives = 92/101 (91%)
 Frame = -3

Query: 379 GIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRK 200
           GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRK
Sbjct: 277 GIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRK 336

Query: 199 SLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAALHG 77
           SL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK A  G
Sbjct: 337 SLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMG 377


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  228 bits (558), Expect = 6e-60
 Identities = 104/129 (80%), Positives = 113/129 (87%)
 Frame = -2

Query: 770 VRVIAHTQMXLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDC 591
           +RVIAH+Q+ L+KQRQKKAH+MEIQLNGG+IEDKVKWAREHLEKPI V +VF QDEMIDC
Sbjct: 160 IRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDC 219

Query: 590 IXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTE 411
           +           TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE
Sbjct: 220 VGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTE 279

Query: 410 MNKKIYRIG 384
           +NKKIYRIG
Sbjct: 280 INKKIYRIG 288



 Score =  189 bits (460), Expect = 4e-48
 Identities = 87/101 (86%), Positives = 92/101 (91%)
 Frame = -3

Query: 379 GIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRK 200
           GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRK
Sbjct: 290 GIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRK 349

Query: 199 SLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAALHG 77
           SL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK A  G
Sbjct: 350 SLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMG 390


>BT021294-1|AAX33442.1|  620|Drosophila melanogaster RE26627p
           protein.
          Length = 620

 Score = 33.5 bits (73), Expect = 0.33
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -1

Query: 165 KRSTSNSLTPRPSSVMVDSRRRLTRLHYMGTXKKDRIRXEDC 40
           KRSTS  +T +  S +V ++++L +LHY    K  R + E C
Sbjct: 425 KRSTSRGVT-KEHSQLVKNKKKLQKLHYANEEKMGRPKLESC 465


>AE014297-2149|AAN13698.1|  552|Drosophila melanogaster CG32855-PA
           protein.
          Length = 552

 Score = 33.5 bits (73), Expect = 0.33
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -1

Query: 165 KRSTSNSLTPRPSSVMVDSRRRLTRLHYMGTXKKDRIRXEDC 40
           KRSTS  +T +  S +V ++++L +LHY    K  R + E C
Sbjct: 357 KRSTSRGVT-KEHSQLVKNKKKLQKLHYANEEKMGRPKLESC 397


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,840,108
Number of Sequences: 53049
Number of extensions: 770678
Number of successful extensions: 1829
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1829
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)