Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_A06
(791 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1861.05 |||carbohydrate kinase|Schizosaccharomyces pombe|chr... 29 0.58
SPCC1393.09c |||RWD domain|Schizosaccharomyces pombe|chr 3|||Manual 29 1.0
SPAC23H3.11c |||glucosidase |Schizosaccharomyces pombe|chr 1|||M... 28 1.3
SPCC1906.03 |wtf19||wtf element Wtf19|Schizosaccharomyces pombe|... 28 1.8
SPCC1620.02 |wtf23||wtf element Wtf23|Schizosaccharomyces pombe|... 28 1.8
SPCC338.06c |||heat shock protein Hsp20 family|Schizosaccharomyc... 28 1.8
SPAC31G5.12c |maf1|n150|repressor of RNA polymerase III Maf1 |Sc... 27 3.1
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 27 4.1
SPBC1711.12 |||serine peptidase |Schizosaccharomyces pombe|chr 2... 26 5.4
SPAC3C7.13c |||glucose-6-phosphate 1-dehydrogenase |Schizosaccha... 26 5.4
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 26 5.4
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 26 5.4
SPAC6F6.12 |||autophagy associated protein Atg24|Schizosaccharom... 26 7.1
SPBC1778.10c |ppk21|SPBC4C3.11|serine/threonine protein kinase P... 26 7.1
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 26 7.1
SPAC17A5.11 |rec12|spo11|endonuclease Rec12|Schizosaccharomyces ... 26 7.1
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 25 9.4
SPCC794.02 |wtf5||wtf element Wtf5|Schizosaccharomyces pombe|chr... 25 9.4
SPAC5D6.10c |mug116||sequence orphan|Schizosaccharomyces pombe|c... 25 9.4
>SPBC1861.05 |||carbohydrate kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 747
Score = 29.5 bits (63), Expect = 0.58
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = -1
Query: 677 WQKETELWTQSQLQKEKNRFRKFRGFSKVFENATRQICDH 558
WQK S E RF K G ++ EN Q C H
Sbjct: 599 WQKLNSFGITSSFYNEIERFTKSTGIEEITENGILQKCFH 638
>SPCC1393.09c |||RWD domain|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -1
Query: 683 TEWQKETELWTQSQLQKEKNRFRKFRGFSKVFENATRQICDHRNVGR 543
TEW+K + W QL+ E+ K + NA + I + R GR
Sbjct: 152 TEWKKGFDAWRNEQLKLEQESKLKEALSAASSSNARKAILEKRMTGR 198
>SPAC23H3.11c |||glucosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 629
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 121 PPYMNGEHQELGKEIRRKGKMFWDHTEK 38
PP+ N +HQ LG R G W EK
Sbjct: 84 PPFYNQDHQHLGVPRSRVGSDVWKMREK 111
>SPCC1906.03 |wtf19||wtf element Wtf19|Schizosaccharomyces pombe|chr
3|||Manual
Length = 393
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 696 LGITHRVAEGNRTMDPKSTSKRKKSFPEISRVF 598
L ITHR + T D STS KK+F +F
Sbjct: 80 LSITHRENHSSGTADNSSTSPLKKAFLSFISIF 112
>SPCC1620.02 |wtf23||wtf element Wtf23|Schizosaccharomyces pombe|chr
3|||Manual
Length = 368
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 696 LGITHRVAEGNRTMDPKSTSKRKKSFPEISRVF 598
L ITHR + T D STS KK+F +F
Sbjct: 80 LSITHRENHSSGTADNSSTSPLKKAFLSFISIF 112
>SPCC338.06c |||heat shock protein Hsp20 family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 139
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 547 PTFRWSQICLVAFSKTLENPR 609
P RWS+ C+ AFS+T+ P+
Sbjct: 84 PLIRWSERCVGAFSRTITLPQ 104
>SPAC31G5.12c |maf1|n150|repressor of RNA polymerase III Maf1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 215
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 556 EMLDGFEVIEQCSLEYDPTKGASIDPHIDDCWVWG 452
E++D + CS+ Y T + DP+ DD +WG
Sbjct: 121 EIIDRHINLSDCSV-YSYTPDSDSDPYGDDALIWG 154
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 195 ITGSIVYSDKIFQQGEYVLHIESL 124
+ GS V+SD+I +GEY+ H S+
Sbjct: 1370 LEGSPVFSDEILNRGEYMPHRGSI 1393
>SPBC1711.12 |||serine peptidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 683
Score = 26.2 bits (55), Expect = 5.4
Identities = 25/132 (18%), Positives = 52/132 (39%)
Frame = -2
Query: 694 WDNSQSGRRKQNYGPKVNFKKKKIVSGNFEGFPKFSKMLQDRFATIEMLDGFEVIEQCSL 515
WD +G R Y + KK S FE + + L ++ F +
Sbjct: 170 WDRWNTGSRNTLYF--IELDKKTENSNYFEISSEKAIDLLKETGLESPVEPFGGLSDFDS 227
Query: 514 EYDPTKGASIDPHIDDCWVWGERIVTVNFLSDSVLTMTRFKGAKTKYNLCSAENYLPVLD 335
YD + DP ++ + +N + ++ +++ KGA + L N++ L+
Sbjct: 228 NYDKLVFVAKDPKLNPATQTKTVVYEINLNTRNLKSLSTAKGACSSPRLAKDGNHIAWLE 287
Query: 334 LEGKIIRNNKNQ 299
++ +++NQ
Sbjct: 288 MQTPQYESDQNQ 299
>SPAC3C7.13c |||glucose-6-phosphate 1-dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 473
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 556 EMLDGFEVIEQCSLEYDPTKGASIDPHIDDCW-VWGE 449
E DG+E++ + ++ DPTK D ++ W +W E
Sbjct: 406 EKRDGYEILFEDAIRGDPTKFIRYD-EVEYAWKIWDE 441
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 26.2 bits (55), Expect = 5.4
Identities = 33/163 (20%), Positives = 68/163 (41%)
Frame = +3
Query: 111 MYGGVNSLYAIHTLLAEISCLSTQCSQ*YLDSPYSTSNERLGIGILTITSTSVTGLHISK 290
++GG L + ++ L + + TS L + + +S VT + +
Sbjct: 339 LFGGTRVLQVTQSPFCKLKTPDNGVPAIVLRTGFETSQGSL-VRTMVFSSEKVTANN--R 395
Query: 291 EDLWFLLFLIIFPSKSNTGR*FSAEHKLYLVFAPLKRVIVRTESDRKLTVTILSPHTQQS 470
E L+F+LFL++F +A ++ V + +R + D + +T + P
Sbjct: 396 ESLYFILFLLVFA--------IAASGYVWHVGSKTERSRYKLMLDCVMIITSVVPSELPM 447
Query: 471 SICGSIDAPLVGSYSNEHCSITSKPSNISMVANLSCSIFENFG 599
+ +++A L G+ S + T +P I + +L F+ G
Sbjct: 448 ELSMAVNASL-GALSKYYIYCT-EPFRIPLSGHLDICCFDKTG 488
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -2
Query: 397 FKGAKTKYNLCSAENYLPVLDLEGKIIRNNKNQRSSLDICKPVTDVDVIVRIPMPRRSLL 218
F +T + SA NY D G ++ N S ++ KP+ + + +RS +
Sbjct: 441 FFNDRTLCTVFSAPNYCGEFDNWGAVMSVNSELLCSFELIKPLDQAAIRRELKKSKRSGM 500
Query: 217 VLY 209
+Y
Sbjct: 501 AIY 503
>SPAC6F6.12 |||autophagy associated protein
Atg24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 664 QNYGPKVNFKKKKIVSGNFEGFPKFSKMLQD 572
Q Y K++ ++ KI SG GF SK L D
Sbjct: 288 QEYSAKLSLERDKISSGGSNGF-SLSKTLDD 317
>SPBC1778.10c |ppk21|SPBC4C3.11|serine/threonine protein kinase
Ppk21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 25.8 bits (54), Expect = 7.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 738 SWKSXS*SIT*TKYLGITHRVAEGNRTMDPKSTSKRKKSFPEISRVFQSFR 586
SWK + + KY+ ++V N D + R FP ISR+F +F+
Sbjct: 76 SWKEYAIKVLDKKYIVKENKVKYVNIERD---SMMRLNGFPGISRLFHTFQ 123
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 25.8 bits (54), Expect = 7.1
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 99 CSPFMYGGVNSLYAIHTLLAEISCLSTQCSQ*YLDSPYSTSNERLGIGILTITSTSVT 272
CS +YG N Y LLA SC TQ +D + ++L I + + ST +T
Sbjct: 41 CSVILYGSGNLRYIDALLLASGSC--TQTGLQPVDLTQISIYQQLTILLFGVLSTPIT 96
>SPAC17A5.11 |rec12|spo11|endonuclease Rec12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 25.8 bits (54), Expect = 7.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 28 YFGIFQYDPKTFCLSFVFLY 87
+FGIF +DP C+ F Y
Sbjct: 224 FFGIFDWDPHGLCIYSCFKY 243
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 25.4 bits (53), Expect = 9.4
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -2
Query: 556 EMLDGFEVIEQCSLEYDPTKGASIDPHIDDCW-VWGERIVTVNFLSDSVLTMTRF 395
E L + I+ S+E P + S H + WGE +V + +SD +M RF
Sbjct: 790 ETLSPYVEIQVHSMEESPFRWCSKVVHENGFRPFWGETMVYESIISDDFYSMIRF 844
>SPCC794.02 |wtf5||wtf element Wtf5|Schizosaccharomyces pombe|chr
3|||Manual
Length = 269
Score = 25.4 bits (53), Expect = 9.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 581 HFRKLWKTLEISGNDFFLFEVDFGS 655
HF K W+ + ++ ++ FLF + GS
Sbjct: 169 HFLKKWENMPMAFSEVFLFNILVGS 193
>SPAC5D6.10c |mug116||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 135
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 672 EGNRTMDPKSTSKRKKSFPEISRVFQSFRKCYK-TDLRPSKC 550
+GN+T + K+K++ E ++V +SF K + R ++C
Sbjct: 86 KGNKTKKKRKKEKKKETIVEKNKVLKSFALYKKINNYRSTRC 127
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,437,519
Number of Sequences: 5004
Number of extensions: 77826
Number of successful extensions: 234
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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