Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_P24
(866 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 54 2e-07
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876... 44 1e-06
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 50 2e-06
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591... 45 3e-06
12_02_0498 + 19721038-19721178,19721376-19721472,19721576-197216... 49 6e-06
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833... 42 1e-05
04_04_0611 - 26594737-26594991,26595307-26595396,26595490-265955... 41 3e-05
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884... 46 4e-05
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 44 1e-04
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 42 6e-04
04_01_0366 - 4823980-4824249 31 1.2
09_02_0208 - 5802370-5802963 31 1.6
04_04_0975 + 29836451-29837032 31 1.6
05_01_0184 - 1298640-1298751,1298936-1299027,1299695-1299910,130... 30 2.8
05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107 30 2.8
04_01_0204 + 2467657-2467781,2467955-2468044,2469071-2469169,246... 30 2.8
03_06_0238 - 32570222-32570330,32570538-32570599,32570658-325708... 30 2.8
01_06_1315 + 36226262-36226533,36227946-36228060,36228710-362287... 30 2.8
01_06_0515 - 29959149-29959253,29959510-29959633,29959702-299597... 29 4.8
08_02_1100 + 24303920-24304001,24304080-24304576,24304745-243048... 29 6.4
11_01_0768 - 6442332-6443792 28 8.4
10_08_0070 + 14637290-14637766,14639215-14639261,14640043-146401... 28 8.4
03_05_0768 + 27575303-27575980,27576427-27576543 28 8.4
02_05_1011 + 33487670-33487958,33490794-33492100,33492541-334928... 28 8.4
01_01_0806 + 6274608-6274647,6274794-6274894 28 8.4
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 410 SPRCAYCNGPI-LDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMF 586
S CA C PI + ++ ++ WH + F C C + E F + +PY ++ Y D F
Sbjct: 254 SRTCAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFF 313
Query: 587 APKCGGCNKPIMENYISALNTQWHP 661
PKC C I N + + HP
Sbjct: 314 HPKCDVCKNFIPTNRNGLIEYRAHP 338
Score = 52.4 bits (120), Expect = 5e-07
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 242 CNACEKPIV-GQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 418
C C+ PI G+ ++ + WHP+ F C CN+ + F + +PY + Y + F P+
Sbjct: 257 CAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFFHPK 316
Query: 419 CAYC 430
C C
Sbjct: 317 CDVC 320
Score = 47.2 bits (107), Expect = 2e-05
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 596 CGGCNKPIMEN-YISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPTC 748
C GC PI ++S +++ WHP CF C C P+ F E +P +C
Sbjct: 257 CAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSC 308
>03_02_0476 +
8768182-8768313,8768734-8768833,8768949-8768986,
8769102-8769191,8769465-8769695
Length = 196
Score = 44.4 bits (100), Expect(2) = 1e-06
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 224 TPQKGCCNACEKPIVGQ-VITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYH 400
T QK C C K + ++ G +H F C HC L N+ +G PYC+P +
Sbjct: 5 TQQK--CKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCKPHFE 62
Query: 401 NLFSPRCAY 427
LF +Y
Sbjct: 63 QLFKETGSY 71
Score = 39.9 bits (89), Expect = 0.003
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Frame = +2
Query: 101 VYREKRAWQEQYRTNPRQPESASLEHMLGSLRADMXRQGVQTPQKGCCNACEKPIVG-QV 277
+++E ++ + +++ P +P S L L + R T +K C C K +
Sbjct: 64 LFKETGSYNKSFQS-PAKPASEKLTPELTRSPSKAARMFSGTQEK--CATCSKTAYPLEK 120
Query: 278 ITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRCAY 427
+T G+ +H F C+H + N+ +G YC+ + LF + +Y
Sbjct: 121 VTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSY 170
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 593 KCGGCNKPIME-NYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVC 739
KC C K + + +S +H CF C+ C++ + ++ ++EG P C
Sbjct: 8 KCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYC 57
Score = 26.2 bits (55), Expect(2) = 1e-06
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +2
Query: 416 RCAYCNGPI--LDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFA 589
+CA C+ L+K VT + +H F C+ G + +G YC+ + +F
Sbjct: 107 KCATCSKTAYPLEK-VTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFK 165
Query: 590 PK 595
K
Sbjct: 166 EK 167
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 242 CNACEKPIV-GQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 418
C C I G+ ++ +G WHPE F C CNQ + F PY + Y F P+
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPK 617
Query: 419 CAYC 430
C C
Sbjct: 618 CDVC 621
Score = 47.2 bits (107), Expect = 2e-05
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = +2
Query: 419 CAYCNGPI-LDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPK 595
CA C+ I + ++ + WH E F C C Q + F PY + Y + F PK
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPK 617
Query: 596 CGGCNKPIMENYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPTCVGVDDDE 769
C C + I N + + HP ++ K C + + ++G P C +C ++ E
Sbjct: 618 CDVCKQFIPTNMNGLIEYRAHP-FWLQKYCPS-------HEVDGTPRCCSCERMEPRE 667
>02_05_0094 -
25758213-25758479,25758886-25758975,25759090-25759118,
25759208-25759307,25759411-25759545
Length = 206
Score = 44.8 bits (101), Expect(2) = 3e-06
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 242 CNACEKPI-VGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLF 409
C AC+K + ++TA G ++H F C+HC L N+ DG YC+ + LF
Sbjct: 10 CKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYCKTHFEQLF 66
Score = 37.1 bits (82), Expect = 0.018
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 242 CNACEKPIVG-QVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 418
C AC+K + + +T G ++H F C+H L T ++ +G YC+ + LF +
Sbjct: 106 CAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEK 165
Query: 419 CAY 427
+Y
Sbjct: 166 GSY 168
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 593 KCGGCNKPI-MENYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPT 745
KC C+K + + ++A +H CF C C+ + ++ +M+G C T
Sbjct: 9 KCKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYCKT 60
Score = 24.6 bits (51), Expect(2) = 3e-06
Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +2
Query: 416 RCAYCNGPILDKCVTALE-KTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAP 592
+CA C + LE +++H F C+ G + +G YC+ + +F
Sbjct: 105 KCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKE 164
Query: 593 K 595
K
Sbjct: 165 K 165
>12_02_0498 +
19721038-19721178,19721376-19721472,19721576-19721619,
19722120-19722203,19722441-19722662
Length = 195
Score = 48.8 bits (111), Expect = 6e-06
Identities = 44/168 (26%), Positives = 63/168 (37%), Gaps = 2/168 (1%)
Frame = +2
Query: 242 CNACEKPI-VGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 418
C AC+K + + +TA R +H F C HC L N+ +G YC P + LF
Sbjct: 12 CMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRT 71
Query: 419 CAYCNGPILDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPKC 598
+ V EKT E+ + F G E+ C
Sbjct: 72 GSLDKSFEGTPKVVKPEKTVENEN--AIKVSSAFA--GTREK-----------------C 110
Query: 599 GGCNKPIME-NYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVC 739
GCNK + ++ NT +H CF C + ++ A EGK C
Sbjct: 111 VGCNKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYC 158
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +2
Query: 242 CNACEKPIVG-QVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 418
C C K + + +T +H F C H + N+ +G+ YC+ + L +
Sbjct: 110 CVGCNKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEK 169
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 416 RCAYCNGPI--LDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFA 589
+C C+ + +DK +TA + +H F C C ++ +G YCR +FD
Sbjct: 11 KCMACDKTVYLVDK-LTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCR-PHFDQLF 68
Query: 590 PKCGGCNK 613
+ G +K
Sbjct: 69 KRTGSLDK 76
>10_08_0547 -
18682357-18682683,18682971-18683060,18683279-18683301,
18683397-18683496,18683615-18683749
Length = 224
Score = 42.3 bits (95), Expect(2) = 1e-05
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 242 CNACEKPI-VGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLF 409
CNAC+K + ++TA +H F C+HC L ++ DG YC+ + LF
Sbjct: 10 CNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSMCSYSSMDGVLYCKTHFEQLF 66
Score = 38.3 bits (85), Expect = 0.008
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 242 CNACEKPIVG-QVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 418
C AC+K + + +T G +H F CAH L ++ +G YC+ + LF
Sbjct: 104 CTACKKTVYPLEKMTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYCQNHFWQLFKKS 163
Query: 419 CAYCNGPILDKCVTALEKTWHTE 487
+Y N +L A E T +E
Sbjct: 164 GSYDN--LLKPASAAAENTVESE 184
Score = 35.5 bits (78), Expect = 0.055
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 593 KCGGCNKPI-MENYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPT 745
KC C+K + + ++A + +H CF C C+ + S+ +M+G C T
Sbjct: 9 KCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSMCSYSSMDGVLYCKT 60
Score = 24.6 bits (51), Expect(2) = 1e-05
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +2
Query: 416 RCAYCNGPI--LDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFA 589
+C C + L+K +T + +H F CA G + +G YC+ ++ +F
Sbjct: 103 KCTACKKTVYPLEK-MTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYCQNHFWQLF- 160
Query: 590 PKCGGCNKPIMENYISALNT 649
K G + + +A NT
Sbjct: 161 KKSGSYDNLLKPASAAAENT 180
>04_04_0611 -
26594737-26594991,26595307-26595396,26595490-26595515,
26595603-26595702,26595820-26595954
Length = 201
Score = 41.1 bits (92), Expect(2) = 3e-05
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 242 CNACEKPI-VGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLF 409
C AC+K + ++TA G +H F C+HC L ++ DG YC+ + LF
Sbjct: 10 CTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLF 66
Score = 36.3 bits (80), Expect = 0.032
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 242 CNACEKPIVG-QVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 418
C AC+K + + +T G ++H F C+H L T ++ +G YC+ + LF +
Sbjct: 105 CAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEK 164
Query: 419 CAY 427
+Y
Sbjct: 165 GSY 167
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 593 KCGGCNKPI-MENYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPT 745
KC C+K + + ++A +H CF C C+ + S+ +M+G C T
Sbjct: 9 KCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60
Score = 24.6 bits (51), Expect(2) = 3e-05
Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +2
Query: 416 RCAYCNGPILDKCVTALE-KTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAP 592
+CA C + LE +++H F C+ G + +G YC+ + +F
Sbjct: 104 KCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFME 163
Query: 593 K 595
K
Sbjct: 164 K 164
>03_02_0490 -
8840577-8840914,8841009-8841067,8841168-8841283,
8841578-8841640,8841826-8842038,8842211-8842330,
8842453-8842578,8842593-8842749,8842830-8842962,
8843054-8843138,8843305-8843421
Length = 508
Score = 46.0 bits (104), Expect = 4e-05
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 596 CGGCNKPIME-NYISALNTQWHPDCFVCKDCQNPVK 700
CGGC I +Y+S L WHP CF C C++P++
Sbjct: 114 CGGCKHEIGHGHYLSCLGMYWHPQCFRCSSCRHPIR 149
Score = 35.1 bits (77), Expect = 0.073
Identities = 28/114 (24%), Positives = 42/114 (36%)
Frame = +2
Query: 320 CAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRCAYCNGPILDKCVTALEKTWHTEHFFC 499
C C E+G ++ G Y P RC+ C PI + VT L+ + F
Sbjct: 114 CGGCKHEIGHGHYLSCLGM-YWHPQCF-----RCSSCRHPIREMEVTFLQFSLECLKVFS 167
Query: 500 AQCGQQFGEEGFHERDGKPYCRADYFDMFAPKCGGCNKPIMENYISALNTQWHP 661
+ F PY + Y ++ PKC C + I N + + HP
Sbjct: 168 GSDSLLYSVSQFTLLGTDPYHKLCYKELHHPKCDVCLQFIPTNRTGLIEYRAHP 221
Score = 32.7 bits (71), Expect = 0.39
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 CNACEKPIV-GQVITALGRTWHPEHFTCAHCNQEL 343
C C+ I G ++ LG WHP+ F C+ C +
Sbjct: 114 CGGCKHEIGHGHYLSCLGMYWHPQCFRCSSCRHPI 148
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 44.4 bits (100), Expect = 1e-04
Identities = 42/176 (23%), Positives = 67/176 (38%), Gaps = 2/176 (1%)
Frame = +2
Query: 224 TPQKGCCNACEKPIVG-QVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYH 400
T QK C++C + + + + A GR +H F C HC L N+ +G YC+P Y
Sbjct: 9 TTQK--CDSCGRTVYPVEELAADGRVYHRPCFRCTHCKATLQFSNYSSVEGVLYCKPHYD 66
Query: 401 NLFSPRCAYCNGPILDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFD 580
+ K +LEK++ + E + G+P + F
Sbjct: 67 QIL-------------KSTGSLEKSFE-------GTSKSAKAEKSNGNKGQPNRFSSMFV 106
Query: 581 MFAPKCGGCNKPIME-NYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPT 745
KC CNK + ++ + +H CF C + + EGK C T
Sbjct: 107 GTQDKCVVCNKTVYPLEKVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYCKT 162
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +2
Query: 242 CNACEKPIVG-QVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 418
C C K + + + G ++H F C H L N +G+ YC+ + LF +
Sbjct: 112 CVVCNKTVYPLEKVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYCKTHHSQLFMVK 171
Query: 419 CAYCN 433
+ N
Sbjct: 172 GNFSN 176
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 41.9 bits (94), Expect = 6e-04
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 596 CGGCNKPIMEN-YISALNTQWHPDCFVCKDCQNPV 697
C GC PI + ++S +++ WHP CF C C P+
Sbjct: 178 CAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPI 212
Score = 32.7 bits (71), Expect = 0.39
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 5/122 (4%)
Frame = +2
Query: 419 CAYCNGPI-LDKCVTALEKTWHTEHFFCAQCGQQFGE-EGFHERDGKPYCRADYFDMFAP 592
CA C PI + ++ ++ WH + F C C + E E +DG RA F
Sbjct: 178 CAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPISEYEIPTNKDGHIEYRAHPF----- 232
Query: 593 KCGGCNKPIMENYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPTCVG---VDD 763
M+ Y A T P C C+ + P K +G+ +C C+ +D
Sbjct: 233 --------WMQKYCPAHETDRTPRCCSCERME-PKDSKYITLDDGRKLCLECLNTSIMDT 283
Query: 764 DE 769
DE
Sbjct: 284 DE 285
Score = 32.7 bits (71), Expect = 0.39
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 13/76 (17%)
Frame = +2
Query: 242 CNACEKPI-VGQVITALGRTWHPEHFTCAHCNQELGTRNF-FERDG-----------RPY 382
C C+ PI G+ ++ + WHP+ F C C++ + +DG + Y
Sbjct: 178 CAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPISEYEIPTNKDGHIEYRAHPFWMQKY 237
Query: 383 CEPDYHNLFSPRCAYC 430
C P + +PRC C
Sbjct: 238 C-PAHETDRTPRCCSC 252
>04_01_0366 - 4823980-4824249
Length = 89
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Frame = +3
Query: 306 LSTSPALTAT----RNWA----RGTSSSVTAGPT-ASPTTTICSHRDALTATDRSWINAS 458
LS++PA R W+ RGT SSVTAG T +P +A A WI A+
Sbjct: 14 LSSNPAAVREEEEERRWSGSLHRGTWSSVTAGSTPPTPVAAAAEEAEADAAVGERWIRAA 73
Query: 459 QL*RKRGTRS 488
+ R G RS
Sbjct: 74 SV-RVWGKRS 82
>09_02_0208 - 5802370-5802963
Length = 197
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 54 ALYVLLAAQGEIAGLTCTERNARGRNSTAP 143
AL + +AA+G IAGL R RGRN+ P
Sbjct: 42 ALLLTIAARGSIAGLRNKIRRRRGRNTKKP 71
>04_04_0975 + 29836451-29837032
Length = 193
Score = 30.7 bits (66), Expect = 1.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 254 EKPIVGQVITALGRTWHPEHFTCAHCNQE 340
++ + + LG TW P +TCA C +E
Sbjct: 51 DEQLAADDVDGLGGTWPPRSYTCAFCRRE 79
>05_01_0184 -
1298640-1298751,1298936-1299027,1299695-1299910,
1300045-1300614
Length = 329
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 118 RVAGT-VPHQPASTRVRISRAYARISSGRHXPPRSTNPPEG 237
RVAG+ +P +P T A R+++GR P +T PP+G
Sbjct: 24 RVAGSSLPRRPTPTT-----AIGRVAAGRRPPAPATGPPQG 59
>05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107
Length = 662
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 118 RVAGT-VPHQPASTRVRISRAYARISSGRHXPPRSTNPPEG 237
RVAG+ +P +P T A R+++GR P +T PP+G
Sbjct: 24 RVAGSSLPRRPTPTT-----AIGRVAAGRRPPAPATGPPQG 59
>04_01_0204 +
2467657-2467781,2467955-2468044,2469071-2469169,
2469353-2469371,2469965-2470021,2470585-2471265,
2471639-2471742,2471919-2472057,2472173-2472334,
2472565-2472681
Length = 530
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +2
Query: 434 GPILDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFD 580
G +D C + WH A CG FG RDGK Y D D
Sbjct: 162 GNPIDDCWRC-DPDWHKNRQRLADCGIGFGRNAIGGRDGKIYVVTDPSD 209
>03_06_0238 -
32570222-32570330,32570538-32570599,32570658-32570883,
32571165-32571532,32571644-32571743,32571817-32571879,
32573077-32573123,32573222-32573353
Length = 368
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Frame = +3
Query: 351 GTSSSVTAGPTASPTTTICSHRDALTATDRSW----INASQL*RKRGT---RSTSFALNA 509
G S + P+ + ++D++T + R W + S GT R + + A
Sbjct: 218 GHSDQGASNPSLHDERAMSRYKDSITKSTRGWKERWFSRSNTISGLGTEVRREVNAGIAA 277
Query: 510 VSNLEKRVSMKGTGSPTAGLITLTCSPPNA 599
VS + +R+ K P+A CSP +A
Sbjct: 278 VSRMMERLETKDDTGPSAVPAASACSPSDA 307
>01_06_1315 +
36226262-36226533,36227946-36228060,36228710-36228752,
36229953-36230329,36230330-36230481,36230591-36230838,
36230919-36231047,36231130-36231739,36231842-36232086,
36232195-36232325
Length = 773
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -1
Query: 830 VKKLGEGIRXEWGGHXKAFLIHHHRLQRMLGIPASLPWHRRTSL*RDSGSPCKRN 666
V+KL G R W GH K L + + PA P H +S S SPC+R+
Sbjct: 177 VQKLRPGSRTAWAGHPKWALPVAYEM------PAPPPPHAASSPPLPSSSPCRRS 225
>01_06_0515 -
29959149-29959253,29959510-29959633,29959702-29959793,
29959921-29960003,29960573-29960654,29960707-29960784,
29960875-29960967,29961647-29961734,29961822-29961991
Length = 304
Score = 29.1 bits (62), Expect = 4.8
Identities = 28/126 (22%), Positives = 45/126 (35%), Gaps = 3/126 (2%)
Frame = +2
Query: 308 EHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRCAYCNGPILDKCVTALEKTWHTE 487
E F C HC+ E T+N + D E H + C+ C G + +
Sbjct: 74 EIFDCRHCHNE--TKNSIKIDAVKRHELPRHEVQQVICSLC-GTEQEVRQVCISCGVCMG 130
Query: 488 HFFCAQCGQQFGEEGFHERDGKPYCR---ADYFDMFAPKCGGCNKPIMENYISALNTQWH 658
+FC C + G H R ++ M G C +++N + + H
Sbjct: 131 KYFCEVCKLFDDDIGKHNDTSFYNVRFQNSNIIAMVVEYAGCCYSIVLKNSHACVEGAMH 190
Query: 659 PDCFVC 676
DC +C
Sbjct: 191 HDCPIC 196
>08_02_1100 +
24303920-24304001,24304080-24304576,24304745-24304842,
24304982-24305813,24306463-24306645,24306726-24307346
Length = 770
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = -3
Query: 348 VPSSWLQ*AQVKCSGCQVRPSAVITCPTIGFSQALQHPFWGV 223
VP W Q V G +V TC GF Q LQ P+WGV
Sbjct: 446 VPQWWFQVMLVAVLGL-----SVFTCE--GFGQQLQLPYWGV 480
>11_01_0768 - 6442332-6443792
Length = 486
Score = 28.3 bits (60), Expect = 8.4
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Frame = +3
Query: 312 TSPALTATRNWARGTSSSVTAGPTASPTTTICSHRDALTATDRSWINASQL*RKRGTRST 491
TSPA +T + T++S AGPTA T+ + A TAT + + + T
Sbjct: 308 TSPAAESTAD----TATSAAAGPTADKETSPAAESTADTATSAAAGSTADKETSLAAEPT 363
Query: 492 S-FALNAVSNLEKRVSMKGTGSPTAGLITLTCSPPNAVVAISP 617
+ A +AV+ PTA T + A SP
Sbjct: 364 ADTATSAVAGSTADKETSPAAEPTADTATSAAAGSTADKETSP 406
>10_08_0070 +
14637290-14637766,14639215-14639261,14640043-14640106,
14641022-14641440,14641821-14642055
Length = 413
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 261 GFSQALQHPFWGVCTPWRXMSARRDP 184
GF + + WG TPWR RR P
Sbjct: 6 GFKEFISGVGWGRATPWRSGDERRPP 31
>03_05_0768 + 27575303-27575980,27576427-27576543
Length = 264
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 616 HNGKLYLSA--QHPVASRLFRLQGLPESRQREV 708
H GKL + A Q P SR GLPE +RE+
Sbjct: 153 HEGKLAVPAPEQEPATSRSAAFAGLPEMERREL 185
>02_05_1011 +
33487670-33487958,33490794-33492100,33492541-33492853,
33493190-33494247
Length = 988
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 35 DQKHPSGSIRAVSGTGGDSGTHVYREKRAWQEQY 136
D+ + + A SG+G SG+ R RAW Y
Sbjct: 855 DELRAAEAAAAASGSGSGSGSRSLRRLRAWARHY 888
>01_01_0806 + 6274608-6274647,6274794-6274894
Length = 46
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 125 QEQYRTNPRQPESASLEHMLGSLRADMXRQGVQTPQ 232
+ + RT ++PE++SL HM S+ D+ + T Q
Sbjct: 2 RRKLRTEGQKPEASSLHHMASSIERDVIARVTGTAQ 37
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,540,888
Number of Sequences: 37544
Number of extensions: 720047
Number of successful extensions: 2260
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2254
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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