Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_P24
(866 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 258 3e-69
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 104 8e-23
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 1e-22
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 104 1e-22
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 97 1e-20
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 7e-20
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 93 4e-19
SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22) 83 2e-16
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 76 3e-14
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 75 8e-14
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 72 7e-13
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 5e-11
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 59 4e-09
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 56 5e-08
SB_18302| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 5e-08
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 48 1e-05
SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08) 43 3e-04
SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14) 43 4e-04
SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26) 40 0.003
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 37 0.019
SB_46754| Best HMM Match : zf-C2H2 (HMM E-Value=1.5e-29) 36 0.032
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 36 0.057
SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_39408| Best HMM Match : Cadherin (HMM E-Value=0) 33 0.23
SB_46598| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.40
SB_7368| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.40
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 32 0.53
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.70
SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026) 31 0.92
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 0.92
SB_3515| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_56567| Best HMM Match : PDZ (HMM E-Value=5.6e-20) 31 1.2
SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16) 31 1.6
SB_15424| Best HMM Match : PAN (HMM E-Value=0.00016) 30 2.1
SB_1943| Best HMM Match : Vicilin_N (HMM E-Value=0.67) 30 2.1
SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45) 30 2.8
SB_23742| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_22899| Best HMM Match : Glyco_transf_8 (HMM E-Value=9.5e-15) 29 3.7
SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_23022| Best HMM Match : CUB (HMM E-Value=0) 29 4.9
SB_6328| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_57739| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 29 4.9
SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_33424| Best HMM Match : zf-B_box (HMM E-Value=2.2e-18) 29 6.5
SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_58730| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_26680| Best HMM Match : GATA (HMM E-Value=2.3) 29 6.5
SB_23100| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6) 28 8.6
SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3) 28 8.6
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 258 bits (633), Expect = 3e-69
Identities = 103/151 (68%), Positives = 123/151 (81%)
Frame = +2
Query: 146 PRQPESASLEHMLGSLRADMXRQGVQTPQKGCCNACEKPIVGQVITALGRTWHPEHFTCA 325
P + + L++MLGSL++DM RQGV T +KG C AC KPI+GQV TALG+TWHPEHF C
Sbjct: 250 PSVGKVSQLDNMLGSLQSDMTRQGVSTTKKGMCAACNKPIIGQVCTALGKTWHPEHFACV 309
Query: 326 HCNQELGTRNFFERDGRPYCEPDYHNLFSPRCAYCNGPILDKCVTALEKTWHTEHFFCAQ 505
C LGT+NFFERDG+PYCE DYH+ F+PRCAYCNGPILD CVTAL++TWH EHF CA+
Sbjct: 310 ACEAPLGTQNFFERDGKPYCERDYHDTFAPRCAYCNGPILDSCVTALDQTWHPEHFVCAE 369
Query: 506 CGQQFGEEGFHERDGKPYCRADYFDMFAPKC 598
CG FG+ GFHERDGKP+CR DY+ MFAP+C
Sbjct: 370 CGNPFGDTGFHERDGKPFCREDYYAMFAPRC 400
Score = 140 bits (339), Expect = 1e-33
Identities = 55/107 (51%), Positives = 69/107 (64%)
Frame = +2
Query: 419 CAYCNGPILDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPKC 598
CA CN PI+ + TAL KTWH EHF C C G + F ERDGKPYC DY D FAP+C
Sbjct: 282 CAACNKPIIGQVCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCERDYHDTFAPRC 341
Query: 599 GGCNKPIMENYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVC 739
CN PI+++ ++AL+ WHP+ FVC +C NP F+ +GKP C
Sbjct: 342 AYCNGPILDSCVTALDQTWHPEHFVCAECGNPFGDTGFHERDGKPFC 388
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 104 bits (250), Expect = 8e-23
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Frame = +2
Query: 293 RTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRCAYCNGPILDKCVTALEK 472
+T+H + F C C Q +G++ F RD R C + + F+ C CN I V
Sbjct: 195 KTFHDKCFICDECKQPIGSKQFIRRDERRLCNNCFDSKFAKVCVKCNQVIKTSSVQHAGS 254
Query: 473 TWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPKCGGCNKPIMEN--YISALN 646
T+H+E F C C + F +++G+ C+ Y + +A +CG C+ I N +++
Sbjct: 255 TYHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRERYAKRCGACHNLIEGNTKFVAYDE 314
Query: 647 TQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPTCVGVDDD 766
+H +CF C C P+ G+ F +G+ +C C DDD
Sbjct: 315 KYFHRECFTCCKCNKPLAGEKFRIRDGEKICLPC---DDD 351
Score = 83.4 bits (197), Expect = 2e-16
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 2/145 (1%)
Frame = +2
Query: 320 CAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRCAYCNGPIL--DKCVTALEKTWHTEHF 493
CA C + F +D + C S CA CNG +K V KT+H + F
Sbjct: 145 CAGCEEM--NEGFTLKDEKLICHGCRGINPSKVCAACNGDFAPGEKKVGYQSKTFHDKCF 202
Query: 494 FCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPKCGGCNKPIMENYISALNTQWHPDCFV 673
C +C Q G + F RD + C + FA C CN+ I + + + +H +CF
Sbjct: 203 ICDECKQPIGSKQFIRRDERRLCNNCFDSKFAKVCVKCNQVIKTSSVQHAGSTYHSECFT 262
Query: 674 CKDCQNPVKGKSFYAMEGKPVCPTC 748
C C P+ G F EG+ VC C
Sbjct: 263 CHHCDKPLAGSPFTKQEGRNVCQNC 287
Score = 73.7 bits (173), Expect = 2e-13
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Frame = +2
Query: 242 CNACEKPIVGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRC 421
C C + I + G T+H E FTC HC++ L F +++GR C+ Y ++ RC
Sbjct: 237 CVKCNQVIKTSSVQHAGSTYHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRERYAKRC 296
Query: 422 AYCNGPI--LDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYC 562
C+ I K V EK +H E F C +C + E F RDG+ C
Sbjct: 297 GACHNLIEGNTKFVAYDEKYFHRECFTCCKCNKPLAGEKFRIRDGEKIC 345
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Frame = +2
Query: 419 CAYCNGPIL--DKCVTAL----EKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFD 580
C CNGP+ D + A + WH + F C + G+ + + +D + YC + +
Sbjct: 80 CKRCNGPVNPGDMALFAERLGPDSCWHVKCFTCEEDGELLVDLIYCSKDDEIYCCRHWGE 139
Query: 581 MFAPKCGGCNK 613
P+C GC +
Sbjct: 140 KLKPRCAGCEE 150
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 104 bits (249), Expect = 1e-22
Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Frame = +2
Query: 290 GRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRCAYCNGPILDKCVTALE 469
G WH F CA+C + +GT F +D +C Y + FS RCA C P+L+ V
Sbjct: 420 GNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLYNG 479
Query: 470 KTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPKCGGCNKPIM-ENYISALN 646
+TWH F C C + F RDG YC Y +A +C C K I+ Y +
Sbjct: 480 ETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEICLKAIVGGEYYTLEE 539
Query: 647 TQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPTC 748
+ +H +CF+C C + + F + +C C
Sbjct: 540 SNFHKECFMCSRCGRSLASEGFVREGDELLCGDC 573
Score = 89.4 bits (212), Expect = 3e-18
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 8/179 (4%)
Frame = +2
Query: 242 CNACEKPIVGQ---VITALGRTWHPEHFTCAHCNQELGT--RNFFERDGRPYCEPDYHNL 406
C AC + I + + + R WH + F C C + L + + F RD + C Y
Sbjct: 339 CEACHQKIGPESRDISSDDDRHWHDKCFICDICRRPLKSDGKFTFYRD-QILCNNCYVAN 397
Query: 407 FSPRCAYCNGPILDKCVTALEKT---WHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYF 577
+ C C G ++D + LE + WH F CA CG+ G GF +D +C Y
Sbjct: 398 YQKECFAC-GQMIDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQ 456
Query: 578 DMFAPKCGGCNKPIMENYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPTCVG 754
F+ +C C +P++E + WH CF C C + +F +G C C G
Sbjct: 457 SKFSKRCASCGEPLLEGGVLYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYG 515
Score = 73.7 bits (173), Expect = 2e-13
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 6/166 (3%)
Frame = +2
Query: 269 GQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRCAYCN---GP 439
G+ A+ + WH HF C C+ + R F R +P C + + ++ C C+ GP
Sbjct: 289 GEYTVAMNKNWHLGHFQCQTCDHSITGRQFIVRGDKPVCTDCFKDSYAHECEACHQKIGP 348
Query: 440 ILDKCVTALEKTWHTEHFFCAQCGQQFGEEG-FHERDGKPYCRADYFDMFAPKCGGCNKP 616
+ ++ WH + F C C + +G F + C Y + +C C +
Sbjct: 349 ESRDISSDDDRHWHDKCFICDICRRPLKSDGKFTFYRDQILCNNCYVANYQKECFACGQM 408
Query: 617 IME--NYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPTC 748
I + + WH +CF C +C + F + CP C
Sbjct: 409 IDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGC 454
Score = 71.7 bits (168), Expect = 7e-13
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Frame = +2
Query: 242 CNACEKPIVGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRC 421
C +C +P++ + G TWH F+C C++ L + F RDG YC Y ++ +C
Sbjct: 463 CASCGEPLLEGGVLYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQC 522
Query: 422 AYCNGPIL-DKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYC 562
C I+ + T E +H E F C++CG+ EGF + C
Sbjct: 523 EICLKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLC 570
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 104 bits (249), Expect = 1e-22
Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Frame = +2
Query: 290 GRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRCAYCNGPILDKCVTALE 469
G WH F CA+C + +GT F +D +C Y + FS RCA C P+L+ V
Sbjct: 8 GNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLYNG 67
Query: 470 KTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPKCGGCNKPIM-ENYISALN 646
+TWH F C C + F RDG YC Y +A +C C K I+ Y +
Sbjct: 68 ETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEICLKAIVGGEYYTLEE 127
Query: 647 TQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPTC 748
+ +H +CF+C C + + F + +C C
Sbjct: 128 SNFHKECFMCSRCGRSLASEGFVREGDELLCGDC 161
Score = 73.3 bits (172), Expect = 2e-13
Identities = 29/93 (31%), Positives = 41/93 (44%)
Frame = +2
Query: 476 WHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPKCGGCNKPIMENYISALNTQW 655
WH F CA CG+ G GF +D +C Y F+ +C C +P++E + W
Sbjct: 11 WHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLYNGETW 70
Query: 656 HPDCFVCKDCQNPVKGKSFYAMEGKPVCPTCVG 754
H CF C C + +F +G C C G
Sbjct: 71 HKACFSCYFCHRSLASAAFSVRDGCRYCMECYG 103
Score = 71.7 bits (168), Expect = 7e-13
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Frame = +2
Query: 242 CNACEKPIVGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRC 421
C +C +P++ + G TWH F+C C++ L + F RDG YC Y ++ +C
Sbjct: 51 CASCGEPLLEGGVLYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQC 110
Query: 422 AYCNGPIL-DKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYC 562
C I+ + T E +H E F C++CG+ EGF + C
Sbjct: 111 EICLKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLC 158
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 100 bits (239), Expect = 2e-21
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 7/176 (3%)
Frame = +2
Query: 242 CNACEKPIVGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRC 421
CN+C K I V+ + H E F C HC L + F RD R C+ ++ RC
Sbjct: 2 CNSCFKTITSSVVRYQNKPHHSECFVCFHCRTPLAGKTFQMRDDRKVCKDCNRIHYAKRC 61
Query: 422 AYCNGPI--LDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPK 595
C I K VT E T+H++ F C++C + + F E +G C Y D +A +
Sbjct: 62 VACRQYIEGTVKFVTRDEGTYHSDCFVCSRCRKPLAGKTFTEHEGSWVCDDCYHDRYAKR 121
Query: 596 CGGCNKPIMEN--YISALNTQWHPDCFVCKD--CQNPVKGKSF-YAMEGKPVCPTC 748
C C++ + N ++ +H +CFVC++ C+ P+ G F +G+ +C C
Sbjct: 122 CNMCHQSLEANVEFVKYDEKLYHNECFVCQNPRCRKPLSGAKFALKSDGRRMCLNC 177
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 97.5 bits (232), Expect = 1e-20
Identities = 51/156 (32%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Frame = +2
Query: 299 WHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRCAYCNGPIL-DKCVTALEKT 475
WH F C C + L +F +D + YC + PRCA C+ I ++C A +
Sbjct: 103 WHASCFICTTCKELLVDLIYFYKDSKVYCGRHHAETLKPRCAACDEIIFAEQCTEAEDSC 162
Query: 476 WHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPKCGGCNKPIMENYIS-ALNTQ 652
WH +HF C +C G + RD KPYC + ++A C C +PI + A N Q
Sbjct: 163 WHVQHFCCFECDCPLGGMRYVMRDNKPYCCHCFESLYAEFCDSCGEPIEPDASQMAHNGQ 222
Query: 653 -WHP--DCFVCKDCQNPVKGKSFYAMEGKPVC-PTC 748
WH +CF C C + G F G+ C P C
Sbjct: 223 HWHATNECFSCCTCGKALLGLPFLPKSGEIYCSPDC 258
Score = 65.3 bits (152), Expect = 6e-11
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Frame = +2
Query: 242 CNACEKPIVGQVIT-ALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 418
C AC++ I + T A WH +HF C C+ LG + RD +PYC + +L++
Sbjct: 143 CAACDEIIFAEQCTEAEDSCWHVQHFCCFECDCPLGGMRYVMRDNKPYCCHCFESLYAEF 202
Query: 419 CAYCNGPILDKCVTALE--KTWH--TEHFFCAQCGQQFGEEGFHERDGKPYCRAD 571
C C PI + WH E F C CG+ F + G+ YC D
Sbjct: 203 CDSCGEPIEPDASQMAHNGQHWHATNECFSCCTCGKALLGLPFLPKSGEIYCSPD 257
Score = 37.1 bits (82), Expect = 0.019
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +2
Query: 242 CNACEKPIVGQV--ITALGRTWHP--EHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLF 409
C++C +PI + G+ WH E F+C C + L F + G YC PD N
Sbjct: 203 CDSCGEPIEPDASQMAHNGQHWHATNECFSCCTCGKALLGLPFLPKSGEIYCSPDCSNGI 262
Query: 410 SP 415
P
Sbjct: 263 PP 264
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +2
Query: 593 KCGGC-NKPIMENYISAL--NTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVC 739
+CG C M Y S +T WH CF+C C+ + ++ + K C
Sbjct: 80 ECGECVTAGSMAVYASRAGQHTCWHASCFICTTCKELLVDLIYFYKDSKVYC 131
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 95.1 bits (226), Expect = 7e-20
Identities = 46/129 (35%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Frame = +2
Query: 257 KPIVGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLF--SP----- 415
K ++G+VI A+ WHP+ F C CN L F + G Y H ++ P
Sbjct: 19 KFVIGRVIKAMQANWHPDCFRCEICNDCLADTGFVKNAGSTYIPEGEHIMYMGDPVHPWH 78
Query: 416 -RCAYCNGPILDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAP 592
C C P+ D+ V AL K WH EHF CA+C + F ++ER G YC Y +++
Sbjct: 79 YNCFCCGRPVEDRVVHALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCETHYNELYGD 138
Query: 593 KCGGCNKPI 619
C CNK I
Sbjct: 139 ICFECNKAI 147
Score = 70.5 bits (165), Expect = 2e-12
Identities = 27/67 (40%), Positives = 37/67 (55%)
Frame = +2
Query: 242 CNACEKPIVGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRC 421
C C +P+ +V+ ALG+ WH EHF CA C + ++ER G YCE Y+ L+ C
Sbjct: 81 CFCCGRPVEDRVVHALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCETHYNELYGDIC 140
Query: 422 AYCNGPI 442
CN I
Sbjct: 141 FECNKAI 147
Score = 62.5 bits (145), Expect = 4e-10
Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 9/130 (6%)
Frame = +2
Query: 383 CEPDYHNLFSPRCAYCNGP-ILDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPY 559
C D H L + + G ++ + + A++ WH + F C C + GF + G Y
Sbjct: 2 CTRD-HTLKQAKAYFLMGKFVIGRVIKAMQANWHPDCFRCEICNDCLADTGFVKNAGSTY 60
Query: 560 CRADYFDMFAP--------KCGGCNKPIMENYISALNTQWHPDCFVCKDCQNPVKGKSFY 715
M+ C C +P+ + + AL WH + FVC C+ P G +Y
Sbjct: 61 IPEGEHIMYMGDPVHPWHYNCFCCGRPVEDRVVHALGKAWHVEHFVCAKCEKPFYGHRYY 120
Query: 716 AMEGKPVCPT 745
+G C T
Sbjct: 121 ERKGLAYCET 130
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 92.7 bits (220), Expect = 4e-19
Identities = 47/133 (35%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Frame = +2
Query: 242 CNACEKPIV-GQVITALGRT-----WHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHN 403
C C KP++ G+V R WHP F C CN L +F +DG YC Y
Sbjct: 309 CFRCSKPVMTGEVAVFASRAGEDKCWHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRHYAE 368
Query: 404 LFSPRCAYCNGPILDKCVT-ALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFD 580
F PRCA C+ I + T A ++ WH HF C +C + G + + R G+P+C Y
Sbjct: 369 QFKPRCAACDELIFSETYTQAEDRNWHQRHFCCLECDRDLGGQLYVARGGQPHCLECYDK 428
Query: 581 MFAPKCGGCNKPI 619
+A C C K I
Sbjct: 429 YYAKHCMSCKKNI 441
Score = 70.5 bits (165), Expect = 2e-12
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Frame = +2
Query: 404 LFSPRCAYCNGPILDKCVTAL------EKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCR 565
L + C C+ P++ V +K WH F C C + + +DG YC
Sbjct: 304 LITMNCFRCSKPVMTGEVAVFASRAGEDKCWHPGCFVCTVCNNLLVDLIYFYKDGVIYCG 363
Query: 566 ADYFDMFAPKCGGCNKPIM-ENYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCP 742
Y + F P+C C++ I E Y A + WH F C +C + G+ + A G+P C
Sbjct: 364 RHYAEQFKPRCAACDELIFSETYTQAEDRNWHQRHFCCLECDRDLGGQLYVARGGQPHCL 423
Query: 743 TC 748
C
Sbjct: 424 EC 425
>SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22)
Length = 81
Score = 83.4 bits (197), Expect = 2e-16
Identities = 33/78 (42%), Positives = 46/78 (58%)
Frame = +2
Query: 353 NFFERDGRPYCEPDYHNLFSPRCAYCNGPILDKCVTALEKTWHTEHFFCAQCGQQFGEEG 532
+FF+ DGRPYCE YH C C PI +C+TA+ + +H EHF CA C +Q +
Sbjct: 3 SFFDHDGRPYCEMHYHAKRGTLCYSCQKPITGRCITAMHRKFHPEHFVCAFCLKQLNKGT 62
Query: 533 FHERDGKPYCRADYFDMF 586
F E++ KPYC + +F
Sbjct: 63 FKEQNDKPYCHPCFVKLF 80
Score = 69.7 bits (163), Expect = 3e-12
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +2
Query: 242 CNACEKPIVGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLF 409
C +C+KPI G+ ITA+ R +HPEHF CA C ++L F E++ +PYC P + LF
Sbjct: 25 CYSCQKPITGRCITAMHRKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCHPCFVKLF 80
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/72 (34%), Positives = 35/72 (48%)
Frame = +2
Query: 533 FHERDGKPYCRADYFDMFAPKCGGCNKPIMENYISALNTQWHPDCFVCKDCQNPVKGKSF 712
F + DG+PYC Y C C KPI I+A++ ++HP+ FVC C + +F
Sbjct: 4 FFDHDGRPYCEMHYHAKRGTLCYSCQKPITGRCITAMHRKFHPEHFVCAFCLKQLNKGTF 63
Query: 713 YAMEGKPVCPTC 748
KP C C
Sbjct: 64 KEQNDKPYCHPC 75
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 76.2 bits (179), Expect = 3e-14
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Frame = +2
Query: 392 DYHNLFSPRCAYCNGPILDKCVTALE-KTWHTEHFFCAQCGQQFGEEGF-HERDGKPYCR 565
D+ + RC C I+D+ + + + WHT+ C C + G E + +DGK YC+
Sbjct: 93 DHVSTQGERCVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCK 152
Query: 566 ADYFDMFAPKCGGCNKPIMEN--YISALNTQWHPDCFVCKDCQNPVK-GKSFYAMEGKPV 736
ADY F KC C + I N A N +H CF C +C+ + G+ F +G +
Sbjct: 153 ADYARQFGTKCARCGRSIHANDWVRRAKNCVYHLACFACDNCKRQLSTGEEFALKDGHVL 212
Query: 737 C 739
C
Sbjct: 213 C 213
Score = 67.7 bits (158), Expect = 1e-11
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Frame = +2
Query: 242 CNACEKPIVGQVITAL-GRTWHPEHFTCAHCNQELGTR-NFFERDGRPYCEPDYHNLFSP 415
C CE IV + + + GR WH + C C+ ELG + +DG+ YC+ DY F
Sbjct: 102 CVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCKADYARQFGT 161
Query: 416 RCAYCNGPI--LDKCVTALEKTWHTEHFFCAQCGQQF--GEEGFHERDGKPYCRADYFD 580
+CA C I D A +H F C C +Q GEE F +DG C+ Y +
Sbjct: 162 KCARCGRSIHANDWVRRAKNCVYHLACFACDNCKRQLSTGEE-FALKDGHVLCKLHYLE 219
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 74.9 bits (176), Expect = 8e-14
Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Frame = +2
Query: 419 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPK 595
C CN PI D+ + +++ WH C C Q F +D K YCR DY +F K
Sbjct: 46 CTGCNEPIEDRFLMKVVDEAWHESCLQCCICRSQLSRSCF-SKDRKLYCRTDYEKVFGTK 104
Query: 596 CGGCNK--PIMENYISALNTQWHPDCFVCKDCQNPV-KGKSFYAMEGKPVC 739
C GC K P E + AL +H CFVC C + + KG+ F + K C
Sbjct: 105 CSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYC 155
Score = 72.1 bits (169), Expect = 5e-13
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Frame = +2
Query: 221 QTPQKGCCNACEKPIVGQ-VITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDY 397
Q + C C +PI + ++ + WH C C +L +R+ F +D + YC DY
Sbjct: 39 QNGRVNICTGCNEPIEDRFLMKVVDEAWHESCLQCCICRSQL-SRSCFSKDRKLYCRTDY 97
Query: 398 HNLFSPRCAYCNG--PILDKCVTALEKTWHTEHFFCAQCGQ--QFGEEGFHERDGKPYCR 565
+F +C+ C P + + AL +H F C CG + G+E F +D K YC+
Sbjct: 98 EKVFGTKCSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQE-FALKDNKLYCK 156
Query: 566 ADY 574
AD+
Sbjct: 157 ADF 159
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 71.7 bits (168), Expect = 7e-13
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Frame = +2
Query: 416 RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAP 592
+CA C PI DK + L+ WH + C+ C E F R+GK +C+ D++ +
Sbjct: 4 QCAGCQLPIADKFLLKVLDGVWHAQCVQCSDCKCPLTERCF-SREGKLFCKTDFYRRYGT 62
Query: 593 KCGGCNKPIMENYI--SALNTQWHPDCFVCKDCQNPVK--GKSFYAMEGKPVC 739
KC GC++ I N + A + +H DCFVC C+ + + +Y +G +C
Sbjct: 63 KCSGCDQGISPNDMVRRAKHLVFHVDCFVCSYCKRQITTGDELYYIGDGSFIC 115
Score = 66.5 bits (155), Expect = 3e-11
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Frame = +2
Query: 242 CNACEKPIVGQ-VITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 418
C C+ PI + ++ L WH + C+ C L T F R+G+ +C+ D++ + +
Sbjct: 5 CAGCQLPIADKFLLKVLDGVWHAQCVQCSDCKCPL-TERCFSREGKLFCKTDFYRRYGTK 63
Query: 419 CAYCNGPIL--DKCVTALEKTWHTEHFFCAQCGQQF--GEEGFHERDGKPYCRADYF 577
C+ C+ I D A +H + F C+ C +Q G+E ++ DG CR DY+
Sbjct: 64 CSGCDQGISPNDMVRRAKHLVFHVDCFVCSYCKRQITTGDELYYIGDGSFICRDDYY 120
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 65.7 bits (153), Expect = 5e-11
Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Frame = +2
Query: 242 CNACEKPIVGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHN------ 403
C++C+ + G++I+ G+ +H F C C Q + G Y +N
Sbjct: 19 CDSCQLYLEGEIISIHGKNFHEACFACNSCRQPFPPSDKIIFTGTDYLCQTCNNAPKAPT 78
Query: 404 --LFSP---RCAYCNGPIL-DKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCR 565
+ SP CA C I + + ALEK WH F C +C E + DGKPYC
Sbjct: 79 TKVSSPYLHTCAGCGEAIKGSQALLALEKQWHLWCFSCTKCHCLLSLE-YMGMDGKPYCE 137
Query: 566 ADYFDMFAPKCGGCN 610
DY ++F C CN
Sbjct: 138 KDYQELFGVTCAACN 152
Score = 63.7 bits (148), Expect = 2e-10
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 218 VQTPQKGCCNACEKPIVG-QVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPD 394
V +P C C + I G Q + AL + WH F+C C+ L + DG+PYCE D
Sbjct: 81 VSSPYLHTCAGCGEAIKGSQALLALEKQWHLWCFSCTKCHCLLSLE-YMGMDGKPYCEKD 139
Query: 395 YHNLFSPRCAYCNGPILDK 451
Y LF CA CNG I K
Sbjct: 140 YQELFGVTCAACNGYITGK 158
Score = 53.6 bits (123), Expect = 2e-07
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 12/132 (9%)
Frame = +2
Query: 380 YCEPDYHNLFSPRCAYCNGPILDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPY 559
YC+ DY N + +C C + + ++ K +H F C C Q F G Y
Sbjct: 6 YCKDDYQNQYGKKCDSCQLYLEGEIISIHGKNFHEACFACNSCRQPFPPSDKIIFTGTDY 65
Query: 560 ----C----RADYFDMFAP---KCGGCNKPIMENY-ISALNTQWHPDCFVCKDCQNPVKG 703
C +A + +P C GC + I + + AL QWH CF C C + +
Sbjct: 66 LCQTCNNAPKAPTTKVSSPYLHTCAGCGEAIKGSQALLALEKQWHLWCFSCTKC-HCLLS 124
Query: 704 KSFYAMEGKPVC 739
+ M+GKP C
Sbjct: 125 LEYMGMDGKPYC 136
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +2
Query: 557 YCRADYFDMFAPKCGGCNKPIMENYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKP- 733
YC+ DY + + KC C + IS +H CF C C+ P G
Sbjct: 6 YCKDDYQNQYGKKCDSCQLYLEGEIISIHGKNFHEACFACNSCRQPFPPSDKIIFTGTDY 65
Query: 734 VCPTC 748
+C TC
Sbjct: 66 LCQTC 70
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 59.3 bits (137), Expect = 4e-09
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Frame = +2
Query: 419 CAYCNGPILDKC-VTALEKTWHTEHFFCAQCGQQFGEE-GFHERDGKPYCRADYFDMFA- 589
CA C IL++ + A+++ WH + C+ C + E +DG CR DY+ F+
Sbjct: 248 CAGCGSRILERFYLMAVDQEWHADCLKCSDCELRLDNELTCFSKDGVILCREDYYRRFSV 307
Query: 590 PKCGGCNKPI--MENYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEG 727
KC C++ I E + A + +H +CF C C+ + ++ M G
Sbjct: 308 KKCSSCSQAISSKELVMRARDQVYHVNCFACDRCKRMLATGEYFGMRG 355
Score = 57.2 bits (132), Expect = 2e-08
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Frame = +2
Query: 230 QKGCCNACEKPIVGQV-ITALGRTWHPEHFTCAHCNQELGTR-NFFERDGRPYCEPDYHN 403
Q+ C C I+ + + A+ + WH + C+ C L F +DG C DY+
Sbjct: 244 QQAVCAGCGSRILERFYLMAVDQEWHADCLKCSDCELRLDNELTCFSKDGVILCREDYYR 303
Query: 404 LFS-PRCAYCNGPILDK--CVTALEKTWHTEHFFCAQCGQQFGE-EGFHERDGKPYCRAD 571
FS +C+ C+ I K + A ++ +H F C +C + E F R + YC+ D
Sbjct: 304 RFSVKKCSSCSQAISSKELVMRARDQVYHVNCFACDRCKRMLATGEYFGMRGIRIYCKED 363
Query: 572 YFDM 583
Y ++
Sbjct: 364 YEEL 367
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 55.6 bits (128), Expect = 5e-08
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Frame = +2
Query: 230 QKGCCNACEKPIVGQ-VITALGRTWHPEHFTCAHCNQELGT--RNFFERDGRPYCEPDYH 400
++ C +C +PI + V+ ALG WH C C+ LG + + + C+ DY
Sbjct: 13 ERRLCRSCNEPISDKYVLQALGSYWHEGCLKCECCDSRLGDIGSSLYSKANLILCKRDYL 72
Query: 401 NLFS-PR-CAYCNGPI--LDKCVTALEKTWHTEHFFCAQCGQQF-GEEGFHERDGKPYC 562
LF P C++CN PI + + A +H E F C +C ++ E F D K C
Sbjct: 73 RLFGIPGVCSHCNKPIAAFELVMRARNNAYHIECFGCQRCRKRLVVGEAFCFHDNKVLC 131
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 596 CGGCNKPIMENYI-SALNTQWHPDCFVCKDCQNPVK--GKSFYAMEGKPVC 739
C CN+PI + Y+ AL + WH C C+ C + + G S Y+ +C
Sbjct: 17 CRSCNEPISDKYVLQALGSYWHEGCLKCECCDSRLGDIGSSLYSKANLILC 67
>SB_18302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 55.6 bits (128), Expect = 5e-08
Identities = 30/70 (42%), Positives = 45/70 (64%)
Frame = -2
Query: 451 FIQDRSVAVSASR*EQIVVVGLAVGPAVTLEEVPRAQFLVAVSAGEVLRVPSATQRRDHL 272
+IQ R + + SR ++I+VV L V AVTL+EV +Q + G+VLR+PS T+ L
Sbjct: 26 YIQYRPITIGTSRGKRIMVVSLTVWLAVTLKEVLCSQGGLTGDTGKVLRMPSLTKSCTDL 85
Query: 271 SNDWFLAGVT 242
++DW +AG T
Sbjct: 86 TDDWLIAGRT 95
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 242 CNACEKPIV-GQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 418
C C K + + A+G+ WH TC CN+ L + N ++DG YC+ Y F P+
Sbjct: 10 CPRCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCYGKNFGPK 69
Score = 36.7 bits (81), Expect = 0.024
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 593 KCGGCNKPIME-NYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPTCVG 754
KC C+K + + A+ +WH C CK C + + +G+ C C G
Sbjct: 9 KCPRCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCYG 63
Score = 36.3 bits (80), Expect = 0.032
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 461 ALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPK 595
A+ K WH C C + ++DG+ YC+ Y F PK
Sbjct: 25 AIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCYGKNFGPK 69
>SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08)
Length = 197
Score = 43.2 bits (97), Expect = 3e-04
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 242 CNACEKPIV-GQVITALGRTWHPEHFTCAHCNQELGTRNFFERD 370
C CEKP+ + A G++WH TC HCN+ L + N +D
Sbjct: 5 CPRCEKPVYFAEQAKANGKSWHKPCLTCKHCNKRLDSTNLTNKD 48
Score = 31.5 bits (68), Expect = 0.92
Identities = 12/32 (37%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = +2
Query: 593 KCGGCNKPI-MENYISALNTQWHPDCFVCKDC 685
KC C KP+ A WH C CK C
Sbjct: 4 KCPRCEKPVYFAEQAKANGKSWHKPCLTCKHC 35
>SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14)
Length = 82
Score = 42.7 bits (96), Expect = 4e-04
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 242 CNACEKPIVG-QVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPR 418
C C +P + + A+G+ +H F C C + L T +F+ R YC+ DY + F+
Sbjct: 11 CATCGEPCIKTEYKYAIGKRFHNACFRCVVCEERLST-DFYARGSELYCKKDYLSKFNSV 69
Query: 419 CAYC 430
C C
Sbjct: 70 CHIC 73
Score = 37.9 bits (84), Expect = 0.011
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 419 CAYCNGP-ILDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPK 595
CA C P I + A+ K +H F C C ++ + F+ R + YC+ DY F
Sbjct: 11 CATCGEPCIKTEYKYAIGKRFHNACFRCVVCEERLSTD-FYARGSELYCKKDYLSKFNSV 69
Query: 596 CGGC 607
C C
Sbjct: 70 CHIC 73
>SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +2
Query: 236 GCCNACEK--PIVGQVITALGRTWHPEHFTCAHCNQEL--GTRNFFERDGRPYCEPDYHN 403
G C C K P V+ LG+ +H FTC C+ +L G R F +GR +CE D N
Sbjct: 706 GACAVCAKLIPATELVMKVLGKVYHLHCFTCTTCHNQLVPGDR-FHVVNGRLFCENDDPN 764
Query: 404 L 406
L
Sbjct: 765 L 765
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +2
Query: 596 CGGCNK--PIMENYISALNTQWHPDCFVCKDCQNP-VKGKSFYAMEGKPVC 739
C C K P E + L +H CF C C N V G F+ + G+ C
Sbjct: 708 CAVCAKLIPATELVMKVLGKVYHLHCFTCTTCHNQLVPGDRFHVVNGRLFC 758
>SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26)
Length = 481
Score = 39.9 bits (89), Expect = 0.003
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 581 MFAPKCGGCNKPIMENYI--SALNTQWHPDCFVCKDCQNPV-KGKSFYAMEGKPVC 739
+F KC GC K I N + AL +H CFVC C + + KG+ F + K C
Sbjct: 2 VFGTKCSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYC 57
Score = 37.1 bits (82), Expect = 0.019
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +2
Query: 404 LFSPRCAYCNG--PILDKCVTALEKTWHTEHFFCAQCGQ--QFGEEGFHERDGKPYCRAD 571
+F +C+ C P + + AL +H F C CG + G+E F +D K YC+AD
Sbjct: 2 VFGTKCSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQE-FALKDNKLYCKAD 60
Query: 572 Y 574
+
Sbjct: 61 F 61
Score = 36.3 bits (80), Expect = 0.032
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 242 CNACEKPIVGQ--VITALGRTWHPEHFTCAHCNQELGT-RNFFERDGRPYCEPDYHNL 406
C+ C+K I V+ ALG +H F C C L + F +D + YC+ D+ L
Sbjct: 7 CSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCKADFAKL 64
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 37.1 bits (82), Expect = 0.019
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +2
Query: 596 CGGCNKPIMEN---YISALNTQWHPDCFVCKDC 685
C C++PI ++ Y+S L WH DCF C C
Sbjct: 2031 CASCSQPIRKSMAVYVSELKRYWHDDCFSCVVC 2063
Score = 31.9 bits (69), Expect = 0.70
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 242 CNACEKPI---VGQVITALGRTWHPEHFTCAHCNQELGT 349
C +C +PI + ++ L R WH + F+C C+ GT
Sbjct: 2031 CASCSQPIRKSMAVYVSELKRYWHDDCFSCVVCHVRFGT 2069
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +2
Query: 419 CAYCNGPILDKC---VTALEKTWHTEHFFCAQCGQQFG 523
CA C+ PI V+ L++ WH + F C C +FG
Sbjct: 2031 CASCSQPIRKSMAVYVSELKRYWHDDCFSCVVCHVRFG 2068
>SB_46754| Best HMM Match : zf-C2H2 (HMM E-Value=1.5e-29)
Length = 487
Score = 36.3 bits (80), Expect = 0.032
Identities = 41/168 (24%), Positives = 62/168 (36%), Gaps = 13/168 (7%)
Frame = +2
Query: 221 QTPQKGCCNACEKPIVGQ-VITALGRTWHP-EHFTCAHCNQELGTRNFFERDGRPYCEPD 394
QTP K C+ CEK + + + R H +F C HC ++L ++ + C
Sbjct: 25 QTPVK--CSVCEKWLRNEYALIGHNRIEHAVRNFVCQHCGKKLASKKTLK------CHLQ 76
Query: 395 YHNLFSP-RCAYCNGPILDKCVTALEKTWHTEH--FFCAQCGQQF------GEEGFHERD 547
+H P +C +C+ + HT F C CG+ F G D
Sbjct: 77 HHTGELPYKCRFCDKRFGKSNSLFDHENRHTGELPFKCVVCGKAFISPQALGRHALVHSD 136
Query: 548 GKPYCRADYFDMFAPKCGGCNKPIMENYISALNTQWHPD--CFVCKDC 685
KP+ KC C+K Y ++ + H D F C C
Sbjct: 137 DKPF-----------KCDVCDKSFKSAYAQRVHKRSHTDDKPFKCDTC 173
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 35.5 bits (78), Expect = 0.057
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 590 PKCGGCNKPIME-NYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPVCPTCV 751
PKC C + +S N ++H CF CKDC+ + + + +GK C T +
Sbjct: 42 PKCPRCGDNVYHAEEVSMENHKFHKKCFSCKDCRKKLDSTNAASHDGK--CHTTI 94
Score = 31.5 bits (68), Expect = 0.92
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +2
Query: 242 CNACEKPIV-GQVITALGRTWHPEHFTCA--HCNQELGTRNFFERDGRP 379
C C+K + I+ G+ WH F CA C ++L + N E +G P
Sbjct: 297 CGRCDKMCYHAEGISMAGKRWHKSCFACAEVRCRKKLESTNCCEGNGIP 345
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 593 KCGGCNKPIME-NYISALNTQWHPDCFVCKDCQNPVKGKSFYAMEGKPV 736
+CG C+K IS +WH CF C + + K +S EG +
Sbjct: 296 RCGRCDKMCYHAEGISMAGKRWHKSCFACAEVRCRKKLESTNCCEGNGI 344
>SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 34.3 bits (75), Expect = 0.13
Identities = 44/195 (22%), Positives = 71/195 (36%), Gaps = 10/195 (5%)
Frame = +2
Query: 134 YRTNPRQPESASLEHMLGSLRADMXRQGV-QTPQKG-CCNACEKPIVGQVITALGRTWHP 307
+ N +P L + L+ D+ R + T +K C+ C K + + H
Sbjct: 93 HNDNLEKPHKCDLCNWAFLLKKDLRRHMLTHTKEKPFACSTCNKAFATKQTLIVHIRVHT 152
Query: 308 EH--FTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSP-RCAYCNGPILDKCVTALEKTW 478
F C C + F+ G H+ P +C C+ L K T
Sbjct: 153 NERPFVCNECGKA------FKTSGDLGVHKHLHSGKRPFKCEQCDKGFLKKSSLTYHLTL 206
Query: 479 HT--EHFFCAQCGQQF---GEEGFHERDGKPYCRADYFDMFAPKCGGCNKPIMENYISAL 643
HT + C +CG+ + E +HER K C +F C C K +Y+ +
Sbjct: 207 HTGKRPYQCQECGKSYRLRSELNYHERSHK--C------VFP--CKECGKSFRSSYLLEV 256
Query: 644 NTQWHPDCFVCKDCQ 688
+ + H CK C+
Sbjct: 257 HLRRHAIKTKCKYCK 271
>SB_39408| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2389
Score = 33.5 bits (73), Expect = 0.23
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 47 PSGSIRAVSGTGGD-SGTHVYREKRAWQE 130
P+G +RA +GTGG +GT Y +K W+E
Sbjct: 1516 PTGGVRATNGTGGPANGTWRYDQKERWKE 1544
>SB_46598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1910
Score = 32.7 bits (71), Expect = 0.40
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = +3
Query: 375 GPTASPTTTICSHRDALTATDRSWINASQL*RKRGTRS-TSFALNAVSNLEKRVSMKGTG 551
GP PTT AT +S I ++ R+R ++S TS L SN R
Sbjct: 1540 GPREIPTTLWTL---PTAATKKSSIGKLKVARERPSQSKTSPTLTTRSNFTTRPDQNNPW 1596
Query: 552 SPTAGLITLTCSPPNAVVAISP*WKTISQRSTPSGIQTVSFARTARIPS 698
S GL++ + A +P W+T++ +PS Q + A +P+
Sbjct: 1597 S-RCGLLSCPTTTSPAKRRKTPSWRTLAPALSPSATQLAACCDAAAVPA 1644
>SB_7368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 32.7 bits (71), Expect = 0.40
Identities = 22/56 (39%), Positives = 27/56 (48%)
Frame = -2
Query: 409 EQIVVVGLAVGPAVTLEEVPRAQFLVAVSAGEVLRVPSATQRRDHLSNDWFLAGVT 242
E++ +AV V L E Q L A A EVLRV D ++DW LA VT
Sbjct: 21 EKLDKAWMAVRLIVLLLEGAFIQLLEAEGADEVLRVKLPVHSGDASASDWLLAAVT 76
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 32.3 bits (70), Expect = 0.53
Identities = 42/155 (27%), Positives = 55/155 (35%), Gaps = 10/155 (6%)
Frame = +2
Query: 221 QTP-QKGCCNACEKPIVGQVITALGRTWHPEHFTC--AHC-------NQELGTRNFFERD 370
QTP QK + P++GQ I E C ++C N+ GTR
Sbjct: 270 QTPCQKRYISLSRNPVLGQYIPWCNARGEFEWMQCYGSYCFCVDRDGNELRGTR-LDNNA 328
Query: 371 GRPYCEPDYHNLFSPRCAYCNGPILDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDG 550
GRP C F+PRC +G + E H +C C QFG E R
Sbjct: 329 GRPACTARVPGSFAPRCR-ADG-------SFEEVQCHKSQGYC-WCVDQFGNEIPRTRSI 379
Query: 551 KPYCRADYFDMFAPKCGGCNKPIMENYISALNTQW 655
KP R P C + + NY+ W
Sbjct: 380 KP-VRCPSLGGAVPTCWQQYQSALRNYVPGRFVPW 413
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 31.9 bits (69), Expect = 0.70
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +2
Query: 641 LNTQWHPDCFVCKD--CQNPVKGKSFYAMEGKPVCPTCVGVDDDE*GMP---SNDLPTXN 805
+ TQ DC VCKD C +P + A+ G+P C D+ P SN+ N
Sbjct: 254 ITTQRKGDCDVCKDVSCTSP-PFSTCVALNGRPACSCPSSCGDESLPQPICGSNNKTYAN 312
Query: 806 EC 811
EC
Sbjct: 313 EC 314
>SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026)
Length = 56
Score = 31.5 bits (68), Expect = 0.92
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 242 CNACEKPIVGQVITAL-GRTWHPEHFTCAHCNQELGTRNFFER 367
C C+K + AL G T+H FTC CN+ L + +R
Sbjct: 12 CPKCDKTVYSAEGQALLGMTFHKRCFTCTTCNKSLDSTTVADR 54
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 31.5 bits (68), Expect = 0.92
Identities = 33/163 (20%), Positives = 57/163 (34%), Gaps = 10/163 (6%)
Frame = +2
Query: 242 CNACEKPIVGQVITALGRTWHPEH--FTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSP 415
C C++ + H E +TC+ C++ ++ + + + +
Sbjct: 452 CPTCDRVFQTNANLERHQASHSEERPYTCSQCDKAFKAPHYLALHMKSHSMANVTFV--- 508
Query: 416 RCAYCNGPILDKCVTALEKTWHTEH--FFCAQCGQQFGEEGFHERDGKPYCRADYFDMFA 589
C+ C+ K + H + F C++CGQ F K + D F
Sbjct: 509 -CSVCDKEFRSKTALINHQVKHLDERPFTCSECGQAFKRFNDMNIHLKTHTSGDAF---- 563
Query: 590 PKCGGCNKPIMENYISALNTQWHPDC------FVCKDCQNPVK 700
KC C+K + SA+N H C + C DC K
Sbjct: 564 -KCNTCDK----RFCSAVNLNRHMLCHNQERPYACDDCDRAFK 601
Score = 31.5 bits (68), Expect = 0.92
Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Frame = +2
Query: 221 QTPQKGCCNACEKPIVGQVITALGRTWHPE--HFTCAHCNQELGTRNFFERDGRPYCEPD 394
QT C C K G R H F+CA CN+ T++ ER + + D
Sbjct: 1309 QTQSSFECTECGKLFSGNKALKRHRLVHTSGSKFSCAICNKAFKTKHHMERHSKIHSR-D 1367
Query: 395 YHNLFSPRC 421
+ PRC
Sbjct: 1368 IEGIACPRC 1376
Score = 29.9 bits (64), Expect = 2.8
Identities = 30/145 (20%), Positives = 47/145 (32%), Gaps = 4/145 (2%)
Frame = +2
Query: 98 HVYREKRAWQEQYRTNPRQPESASLEHMLGSLRADMXRQGVQTPQKGCCNACEKPIVGQV 277
H+ K Q R + + S E++ A + Q + C C+K
Sbjct: 984 HLKTHKVVHTRQPRCSSCKETFDSKENLKQHSSAGCPEKSSQEREAYTCQVCDKAFSRVS 1043
Query: 278 ITALGRTWHPEH---FTCAHCNQELGTRNFFERDGRPY-CEPDYHNLFSPRCAYCNGPIL 445
+H + F C+HCN+ R + R E D+ +C C +
Sbjct: 1044 SYKTHFRYHSKDSLTFKCSHCNETFSNRQSLIKHQREVTAEGDF------KCDVCEKCFI 1097
Query: 446 DKCVTALEKTWHTEHFFCAQCGQQF 520
K K HT C C + F
Sbjct: 1098 TKAHLKTHKVVHTRQPRCPSCKETF 1122
>SB_3515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1295
Score = 31.5 bits (68), Expect = 0.92
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = +2
Query: 407 FSPRCAYCNGPILDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMF 586
++P A G +++ T + H C C ++ + F+ R + YC+ DY F
Sbjct: 710 YAPPLAEQEGQLIETEATGAPQKHHHTLNQCVVCEERLSTD-FYARGSELYCKKDYLSKF 768
Query: 587 APKCGGC 607
C C
Sbjct: 769 NSVCHIC 775
Score = 31.5 bits (68), Expect = 0.92
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 320 CAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRCAYC 430
C C + L T +F+ R YC+ DY + F+ C C
Sbjct: 740 CVVCEERLST-DFYARGSELYCKKDYLSKFNSVCHIC 775
>SB_56567| Best HMM Match : PDZ (HMM E-Value=5.6e-20)
Length = 285
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = -1
Query: 146 GWCGTVPATRVSLCTRESRYLPLCR*QHV*SRTGAFDRDECRAESSA 6
G + PA R L + E +PL R R G F DEC AE+SA
Sbjct: 44 GSSSSAPAARTELLSTEKSEMPLGRRHRY--RVGVFLDDECIAEASA 88
>SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16)
Length = 339
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = +2
Query: 563 RADYFD--MFAPKCGGCNKPIMEN--YISALNTQWHPDCFVCKDCQNP-VKGKSFYAMEG 727
+A + D +F KC C+ +N + A N +H DCF C C V G F E
Sbjct: 71 KAGFIDPVLFGTKCAKCSLNFSKNDFVMRARNKIYHIDCFRCVACSRQLVPGDEFALRED 130
Query: 728 KPVC 739
C
Sbjct: 131 GLFC 134
>SB_15424| Best HMM Match : PAN (HMM E-Value=0.00016)
Length = 702
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 314 FTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRCAYCNGPIL 445
F C +E+ N F +G Y PD H F RC + + P++
Sbjct: 632 FPALSC-EEVFACNPFSENGNYYLSPDSHTPFLVRCVFDDAPVV 674
>SB_1943| Best HMM Match : Vicilin_N (HMM E-Value=0.67)
Length = 695
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 59 IRAVSGTGGDSGTHVYREKRAWQEQYRTNPRQPESASLEH 178
+ + S T DS H Y+EK A Q ++ S +LEH
Sbjct: 293 VPSYSNTSSDSAIHCYKEKEAISSQDMSSHNTSSSDNLEH 332
>SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 694
Score = 30.3 bits (65), Expect = 2.1
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Frame = +2
Query: 290 GRTWHPEHFTCAHCNQELGTR-NFFERDGRPYCEPDYHNLFSPRCAYCNGPILDKCVTAL 466
G+T P + C +C+++ T+ E R + + FS C YCN K
Sbjct: 202 GKTERP--WGCVYCSKKFKTKAKVAEHTRRTHLKV---KPFS--CTYCNKKCASKSDLDK 254
Query: 467 EKTWHT--EHFFCAQCGQQFGEEG---FHER---DGKPY 559
+ HT + + C CG+ FGE H+R + KPY
Sbjct: 255 HERTHTGEKPYSCKYCGRMFGESSSLIMHQRIHTNEKPY 293
>SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45)
Length = 1091
Score = 29.9 bits (64), Expect = 2.8
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 3/100 (3%)
Frame = +2
Query: 242 CNACEK--PIVGQV-ITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFS 412
C C K +VG + + AL T EH C C + F+ + H+
Sbjct: 54 CKQCGKCFTLVGTLKMDALIHTGQKEHH-CPQCGKRFALAGHFKMHALTHTGQKEHHC-- 110
Query: 413 PRCAYCNGPILDKCVTALEKTWHTEHFFCAQCGQQFGEEG 532
P C + AL T EH C QCG++F G
Sbjct: 111 PECGKRFALAGHFKMRALTHTGQKEHH-CPQCGKRFARAG 149
>SB_23742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 619 NGKLYLSAQHPVASRLFRLQGLPESRQREVLL 714
NG+ Y+ +HP A R F G R+ +VL+
Sbjct: 56 NGRTYIMERHPAAERTFFHYGATSGRRTDVLM 87
>SB_22899| Best HMM Match : Glyco_transf_8 (HMM E-Value=9.5e-15)
Length = 847
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 5 RPMTPHGIRLDQKHPSGSIRAVSGTGGDSGTHVYREKRAWQEQYRTNPRQPESASLEHML 184
R IR HPS S A G D YRE A + PR+ +S +++ +
Sbjct: 565 RTHATQSIRDGHHHPSRSKSATPYAGRDRQLGNYREHHAPYDSSAKKPRRRQSKNIQRRI 624
Query: 185 GSLRA 199
+ +A
Sbjct: 625 SNTKA 629
>SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/132 (17%), Positives = 40/132 (30%)
Frame = +2
Query: 98 HVYREKRAWQEQYRTNPRQPESASLEHMLGSLRADMXRQGVQTPQKGCCNACEKPIVGQV 277
H R K + + P Q A+ H + + C C K
Sbjct: 312 HRKRLKLNSPQDVKAIPSQTAIANDAHRVSQNKTPAASSSSSASGDHQCTQCSKSFNSGS 371
Query: 278 ITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNLFSPRCAYCNGPILDKCV 457
A WH + + C++ + + +P +P +C +C+ D
Sbjct: 372 SLARHFAWHKKA-SDVQCHENSTAALDSQVEEKPNAKPSKMEFSDHKCTHCSLAFKDSSS 430
Query: 458 TALEKTWHTEHF 493
A WH + F
Sbjct: 431 LAKHNAWHAKTF 442
>SB_23022| Best HMM Match : CUB (HMM E-Value=0)
Length = 1307
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 306 LSTSPALTATRNWARGTSSSVTAGPTASPTTT 401
++++ L +T +W TSSSVT PT++PT T
Sbjct: 986 MTSTSILPSTSSWRIPTSSSVTT-PTSAPTPT 1016
>SB_6328| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 75
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 491 FFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAP 592
F+C + ++GE+GF+ R GK + Y F P
Sbjct: 26 FYCTEYATRYGEDGFNPRTGK-HLGTGYQSNFRP 58
>SB_57739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2
Query: 62 RAVSGTGGDSGTHVYREKRAWQEQYRTNPRQPESASLE---HMLGSLRADMXRQGVQTPQ 232
R + T D+ HV+ +R + RT + E H++G +D+ R GV P
Sbjct: 112 REYTYTHPDTQIHVHAPRRT-NTRKRTQTHKCTYTHQETQMHVVGE-SSDLRRGGVSRPV 169
Query: 233 KGCCNACEKPIVG 271
G C+AC + G
Sbjct: 170 NGRCSACMPKLTG 182
>SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2973
Score = 29.1 bits (62), Expect = 4.9
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +3
Query: 381 TASPTTTICSHRDALTATDR-SWINASQL*RKRGTRS-TSFALNAVSNLEKRVSMKGTGS 554
T P+ RDA + D+ S I ++ R+ ++S S L SN R + S
Sbjct: 1132 TTRPSRNTNKTRDATNSGDKKSSIGKRKVAREGPSQSKASPTLTTRSNFTTRPDQNNSWS 1191
Query: 555 PTAGLITLTCSPPNAVVAISP*WKTISQRSTPSGIQTVSFARTARIPS 698
L + T + P A +P W+T++ PS Q + A +P+
Sbjct: 1192 QCGLLSSPTTTSP-AKRRKTPSWRTLAPALPPSATQLAACCDAAAVPA 1238
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 291 VALGTLSTSPALTATRNWAR-GTSSSVTAGPTASPTTTI 404
VALG ++ S T TR+W+ GTSS++ A T P I
Sbjct: 407 VALGVVAYSTWSTVTRDWSLVGTSSTLIAMVTVYPCEVI 445
>SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/76 (25%), Positives = 27/76 (35%)
Frame = +2
Query: 227 PQKGCCNACEKPIVGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNL 406
P +G CN C+ + Q I+A R +H T + E+ + PYC
Sbjct: 106 PAQGRCNECDHFVCEQCISAHKRLRPLQHHTILSLD-EIKSGKLLAMSKTPYCTKHKGKK 164
Query: 407 FSPRCAYCNGPILDKC 454
C C I C
Sbjct: 165 LKLFCESCKEVICRDC 180
>SB_33424| Best HMM Match : zf-B_box (HMM E-Value=2.2e-18)
Length = 270
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/82 (24%), Positives = 28/82 (34%)
Frame = +2
Query: 227 PQKGCCNACEKPIVGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNL 406
P +G CN C+ + Q I+A R +H T + E+ + PYC
Sbjct: 44 PAQGRCNECDHFVCEQCISAHKRLQPLQHHTILSLD-EIKSGKLLAMSKTPYCTKHKGEK 102
Query: 407 FSPRCAYCNGPILDKCVTALEK 472
C C I C K
Sbjct: 103 LKLFCESCKEVICLDCTVVDHK 124
>SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 28.7 bits (61), Expect = 6.5
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +2
Query: 653 WHPDCFVCKDCQNPVKGKSFYAMEGKPVC 739
WH CF C+ C + K++ + P C
Sbjct: 213 WHKGCFKCESCGMTLNMKTYKGYQKLPYC 241
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = +2
Query: 299 WHPEHFTCAHCNQELGTRNFFERDGRPYCEPDY 397
WH F C C L + + PYC+ Y
Sbjct: 213 WHKGCFKCESCGMTLNMKTYKGYQKLPYCDAHY 245
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +2
Query: 476 WHTEHFFCAQCGQQFGEEGFHERDGKPYCRADY 574
WH F C CG + + PYC A Y
Sbjct: 213 WHKGCFKCESCGMTLNMKTYKGYQKLPYCDAHY 245
>SB_58730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1014
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +2
Query: 20 HGIRLDQKHPSGSIRAVSGTGG--DSGTHVYREKRAWQEQYRTNPRQPESAS 169
H + +Q H G++ ++G GG H Y R ++ NP P S +
Sbjct: 896 HQVWTEQSHSRGAVNFITGAGGFLQGLLHGYGGVRVREDSLEINPTLPPSTT 947
>SB_26680| Best HMM Match : GATA (HMM E-Value=2.3)
Length = 193
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +2
Query: 671 VCKDCQNPVKGKSFYA--MEGKPVCPTCVGVDDDE*GMPSNDLPT--XNECPPP 820
V KD + PV+GK + +P+C CV ++ GMPS P+ E P P
Sbjct: 73 VKKDVKMPVQGKCTRCQYISSQPLCKACVLLEGLNKGMPSEMPPSRQVKESPLP 126
>SB_23100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 197 ADMXRQGV-QTPQKGCCNACEKPIVGQVITALGRTWHPEHFTCAHCN 334
A QGV Q+PQ C + IV QV+ + T HP+ F + CN
Sbjct: 63 APHTHQGVLQSPQD---RKCLQNIVKQVLREMSDTSHPQVFVMSGCN 106
>SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/74 (22%), Positives = 27/74 (36%)
Frame = +2
Query: 467 EKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPKCGGCNKPIMENYISALN 646
+K + ++C C FG++ R K A CG C K + A +
Sbjct: 63 KKIKRRKRYYCDFCNTTFGKKWGLTRHLKTLAHAQVTSNSQCMCGNCGKDMATPERLAKH 122
Query: 647 TQWHPDCFVCKDCQ 688
+ H F C C+
Sbjct: 123 METHKKKFGCDICE 136
>SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1427
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = -1
Query: 590 GRTCQSNQP-CS-RASRPFHGNPLLQIADRIERKRSAPCATFS 468
G CQ P CS A R G+P LQ +D + PC S
Sbjct: 1178 GELCQKVAPLCSGSAERNLEGSPRLQASDSTMKAEETPCLPHS 1220
>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/82 (24%), Positives = 28/82 (34%)
Frame = +2
Query: 227 PQKGCCNACEKPIVGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGRPYCEPDYHNL 406
P +G CN C+ + Q I+A R +H T + E+ +R YC
Sbjct: 111 PAQGRCNECDHFVCEQCISAHKRFRPLQHHTILSLD-EIKSRKLLAMSKTSYCTKHKGEK 169
Query: 407 FSPRCAYCNGPILDKCVTALEK 472
C C I C K
Sbjct: 170 LKLFCESCKEVICRDCTVVDHK 191
>SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 470
Score = 28.3 bits (60), Expect = 8.6
Identities = 28/136 (20%), Positives = 51/136 (37%)
Frame = +3
Query: 312 TSPALTATRNWARGTSSSVTAGPTASPTTTICSHRDALTATDRSWINASQL*RKRGTRST 491
T+P+ A T+++ A TA TTT + A T + A+ T +
Sbjct: 289 TTPSPPAAIRATTTTATTTEAAATAEATTTATATTTATTTEAAATAEATTTATATTTTAA 348
Query: 492 SFALNAVSNLEKRVSMKGTGSPTAGLITLTCSPPNAVVAISP*WKTISQRSTPSGIQTVS 671
A + E + + T + TA + A+ T+ + +T +G + V
Sbjct: 349 ITTTAATTTSEAAATAEATTTATATTTVTAATSTKTTTAMKK--TTVKEETTTAG-KNVD 405
Query: 672 FARTARIPSKGSPSMP 719
T + + S +MP
Sbjct: 406 SINTPKAKTLKSETMP 421
>SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6)
Length = 269
Score = 28.3 bits (60), Expect = 8.6
Identities = 24/105 (22%), Positives = 43/105 (40%)
Frame = +3
Query: 294 ALGTLSTSPALTATRNWARGTSSSVTAGPTASPTTTICSHRDALTATDRSWINASQL*RK 473
A T + + TAT +++VTA TA+ T T + T T + + A+
Sbjct: 150 AAATATATGTTTATATVTATATATVTAAATATATATATA---TATTTSTATVTATATVTV 206
Query: 474 RGTRSTSFALNAVSNLEKRVSMKGTGSPTAGLITLTCSPPNAVVA 608
T +T+ + V++ T + T +T+T + V A
Sbjct: 207 TATAATTVTATVTAATTVTVTVTATAATTV-TVTVTATVTATVTA 250
>SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3)
Length = 531
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 309 STSPALTATRNWARGTSSSVTAGP--TASPTTTICSHRDALTATDRSWIN 452
+T+ ALT T T+ + T P T +PTTT + D T+ D S N
Sbjct: 31 TTNTALTTTTAPTTTTAPTTTTAPTTTTAPTTTTTPNNDYNTSDDYSTNN 80
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,577,608
Number of Sequences: 59808
Number of extensions: 777378
Number of successful extensions: 2572
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 2066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2491
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2479240863
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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