Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_P23
         (869 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    29   0.063
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   9.5  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 28.7 bits (61), Expect = 0.063
 Identities = 18/70 (25%), Positives = 34/70 (48%)
 Frame = -1

Query: 602 VISLYNSFSTLLPCSRLYIKKCAISNKTLSCIIGYVSEIFLFNLSMGRCSFSFSNLTV*I 423
           +I+L   F  L  CS    +K  ++     CI GY+    LF+LS+   +   ++  + +
Sbjct: 18  LINLTKIFGFLPVCSSQKGQKTCLNLSINYCICGYIFSAILFSLSILGLTEDLNSAPIRM 77

Query: 422 GKGIGKFLLL 393
              I K+++L
Sbjct: 78  KNPIVKYIIL 87


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 715 RSPNHRRLSCRSLTYTHREL 656
           R P+   LS RS  YT+REL
Sbjct: 36  RYPSGPELSDRSAAYTNREL 55


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -3

Query: 438 SHSLNRKRYRKILASLNNFI-NFRVWFNFR 352
           +HS+   +Y K+L +  +FI  F +  N R
Sbjct: 14  THSMKNFKYLKVLVTFAHFICLFPITINIR 43


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 172 ILF*INISCVFIQQARKSN*NKYERIL 92
           +LF +NIS + I   +K   N   +IL
Sbjct: 356 VLFILNISTIIITARKKQQWNSLIKIL 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,125
Number of Sequences: 336
Number of extensions: 4484
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)