Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_P21
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 184 6e-47
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 138 5e-33
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 126 2e-29
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 86 4e-17
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 62 7e-10
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 38 0.010
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 38 0.010
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical... 29 4.4
Z83216-1|CAB62780.1| 238|Caenorhabditis elegans Hypothetical pr... 29 5.9
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 184 bits (449), Expect = 6e-47
Identities = 89/176 (50%), Positives = 111/176 (63%)
Frame = +1
Query: 112 STKVSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGN 291
S +S I A RTP+ + AA+ER + I+EV++G
Sbjct: 16 SAALSNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQ 75
Query: 292 VCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGM 471
VC AN GQAPARQA + AGL S TTVNKVC+SG+K+I+LAAQ +QTG QD + GGM
Sbjct: 76 VCQANAGQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGGGM 135
Query: 472 ESMSNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKNYKLLDK 639
ESMS VPFY++RGE YGG Q++DGIV DGLTD Y+K HMGNC E T+K + K
Sbjct: 136 ESMSQVPFYVQRGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRK 191
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +3
Query: 606 KHSKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVXTEK 743
K SK++ ITR+DQDEYA+NSYK+SA A+E E+VPV V ++K
Sbjct: 181 KTSKEMGITRKDQDEYAINSYKKSAKAWENGNIGPEVVPVNVKSKK 226
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/48 (54%), Positives = 37/48 (77%)
Frame = +2
Query: 740 KEGLLLIFAEDEEYKRVNFEKFTKXSTVSQKENGTVTAGXASTLNDGS 883
K+G+ ++ +DEE+ +VNF+KFT TV QK+ GT+TA ASTLNDG+
Sbjct: 225 KKGVTIV-DKDEEFTKVNFDKFTSLRTVFQKD-GTITAANASTLNDGA 270
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 138 bits (334), Expect = 5e-33
Identities = 75/168 (44%), Positives = 97/168 (57%)
Frame = +1
Query: 121 VSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCS 300
+S +V I S RTP+ AAIER+G+ E+I+EV G V
Sbjct: 1 MSDKKVFILSGARTPIGAYRGSFANFGAVELGTVAAKAAIERSGVAPEKIEEVIGGCVLP 60
Query: 301 ANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESM 480
A LGQ RQ + AGLP +T TVNKVC+S MK+++ AA ++ G D IL G E+M
Sbjct: 61 AGLGQNVTRQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENM 120
Query: 481 SNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKNY 624
S VPFY+ RGE +GG+Q+ DGI DGL D+ K MG CAE T K+Y
Sbjct: 121 SQVPFYVPRGEIPFGGIQMTDGISKDGLEDIKEKGPMGLCAEKTVKDY 168
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 606 KHSKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVXTEK 743
K K ITR++QD YA+ SYK+++ A+ ++ F +E+VPV V T +
Sbjct: 163 KTVKDYGITREEQDAYAIESYKKASNAWSSEKFSEEVVPVSVKTSR 208
Score = 36.3 bits (80), Expect = 0.029
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +2
Query: 755 LIFAEDEEYKRVNFEKFTKXSTVSQKEN-GTVTAGXASTLNDGSL 886
++ EDEEYK++ K + V ++ GT+T AS+LNDG++
Sbjct: 211 VVITEDEEYKKLIESKVSSLKPVFVRDGTGTITPANASSLNDGAV 255
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 126 bits (304), Expect = 2e-29
Identities = 81/206 (39%), Positives = 109/206 (52%), Gaps = 2/206 (0%)
Frame = +1
Query: 10 INCLRR*WLLVSNRNIVLLDFNVLLQIFTAMAAFSTKVSLNEVVIASAVRTPMXXXXXXX 189
+N LR ++ LD + + + T AA S K + I A RTP+
Sbjct: 64 VNSLREIMSRYFKAKMLSLDGHAIGRGITTSAALSNK----DAFIVGAARTPIGSFRSSL 119
Query: 190 XXXXXXXXXXXXVNAAIERAGIPKEEIKE--VYIGNVCSANLGQAPARQAVIFAGLPKST 363
+ AA+ER + I+E V++G VC AN GQA ARQA + AGL S
Sbjct: 120 SSVTAPELASVAIKAALERGAVKPSSIQEANVFLGQVCHANAGQASARQAALGAGLDLSV 179
Query: 364 ICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVD 543
TTVNK +SGMK+I+LAAQ +QTG QD+ + GGMESMS VPF+L R E S Q V+
Sbjct: 180 AVTTVNKGWSSGMKAIILAAQQIQTGHQDLAIGGGMESMSQVPFFLARVEQSSNKYQ-VE 238
Query: 544 GIVFDGLTDVYNKFHMGNCAENTAKN 621
V DG++D ++K + E T N
Sbjct: 239 QTVQDGISDFFDKQELCINGERTNGN 264
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 85.8 bits (203), Expect = 4e-17
Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Frame = +1
Query: 232 AAIERAGIPKEEIKEVYIGNV-CSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKS 408
AA++ A + + + V GNV S+ G +R + +G+P++ TVN++C SG ++
Sbjct: 38 AALKHANVGADAVDHVIFGNVVASSRDGIYLSRHIGLKSGVPQNVGALTVNRLCGSGFQA 97
Query: 409 IMLAAQGLQTGAQDIILAGGMESMSNVPFYLK--RGETSYGGMQLVDGIVFDGLTDVYNK 582
++ AAQ ++ G +I+LAGG E+MS VPF ++ R T+ G + +++D L+D Y K
Sbjct: 98 VVNAAQAIKLGESNIVLAGGTENMSMVPFAVRDIRFGTALGKKYEFEDMLWDSLSDPYAK 157
Query: 583 FHMGNCAENTAKNYKL 630
MG AE YK+
Sbjct: 158 LAMGQTAEKLGAQYKV 173
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +3
Query: 579 QISHGKLC*KHSKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVXTEK 743
+++ G+ K + ++TRQ+ DE+A+ S A EA + +E+V + + K
Sbjct: 157 KLAMGQTAEKLGAQYKVTRQEADEFALRSQTLWKKAQEAGVYKNEIVGITIKGRK 211
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 61.7 bits (143), Expect = 7e-10
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Frame = +1
Query: 94 TAMAAFST-KVSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEI 270
TA AA + K ++ +V+ AVRTP + A +E+ +P E++
Sbjct: 11 TARAASAVAKKNMPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQL 70
Query: 271 KEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQD 450
+ G V AR+A + AG+P TV C S ++ L TG +
Sbjct: 71 DHIICGTVIQECKTSNIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNAN 130
Query: 451 IILAGGMESMSNVPFYLKR 507
I+AGG+E +S+VP R
Sbjct: 131 AIIAGGVELLSDVPIRYNR 149
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 767 EDEEYKRVNFEKFTKXSTVSQKENGTVTAGXASTLNDGS 883
ED + EK + K +GTVTA AS L DG+
Sbjct: 251 EDNGIRVSTLEKLSSLKPAFVKPHGTVTAANASYLTDGA 289
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +1
Query: 226 VNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 405
V A++ + +I++ +G + A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 406 SIMLAAQGLQTGAQDIILAGGMESMS 483
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +1
Query: 226 VNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 405
V A++ + +I++ +G + A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 406 SIMLAAQGLQTGAQDIILAGGMESMS 483
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +3
Query: 294 LFCKFG-PSTCK-TSCNICRFAKKYHMYNCKQ--SMCLWH----EIYNVGSTRSTNWSPR 449
L C +G PS + T NI + H ++CK C ++ YN+ ST+ W+ R
Sbjct: 182 LNCIYGYPSVFRITRGNIVELLELSHFFDCKNVTMFCEYNLCNDTCYNIRSTQKMEWAIR 241
Query: 450 YN 455
YN
Sbjct: 242 YN 243
>AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical
protein F19B10.10 protein.
Length = 639
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 330 SCNICRFAKKYHMYNCKQSMCLWHEI 407
+C++ R A KY+ Y +QS LW I
Sbjct: 15 ACSLRRMANKYYPYTMRQSFPLWTSI 40
>Z83216-1|CAB62780.1| 238|Caenorhabditis elegans Hypothetical
protein C08F11.1 protein.
Length = 238
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -2
Query: 155 TADAITTSLRETLVENAAIAVNICNKTLKSNKTMFLLDTSNHYLLRQLIN 6
T+D I SL L +N+AIA I + + N L+ +++ L+N
Sbjct: 168 TSDLILDSLTARLEKNSAIAFEIYTEAFEKNHNQTLMKGKWYFVRETLVN 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,069,441
Number of Sequences: 27780
Number of extensions: 399797
Number of successful extensions: 1159
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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