Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_P21
(888 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 24 1.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 24 1.6
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 3.7
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 3.7
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 3.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 3.7
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 8.6
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 8.6
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 8.6
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 8.6
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 8.6
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 8.6
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 8.6
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 8.6
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 8.6
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 24.2 bits (50), Expect = 1.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -2
Query: 782 YTLHLQQILTGAPLFCGN 729
Y ++++QI P++CGN
Sbjct: 109 YIINIEQIPVPVPIYCGN 126
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 24.2 bits (50), Expect = 1.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -2
Query: 782 YTLHLQQILTGAPLFCGN 729
Y ++++QI P++CGN
Sbjct: 350 YIINIEQIPVPVPIYCGN 367
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/21 (38%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -2
Query: 788 LFYTL-HLQQILTGAPLFCGN 729
L+Y + +++QI P++CGN
Sbjct: 107 LYYNINYIEQIPIPVPIYCGN 127
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/21 (38%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -2
Query: 788 LFYTL-HLQQILTGAPLFCGN 729
L+Y + +++QI P++CGN
Sbjct: 107 LYYNINYIEQIPIPVPIYCGN 127
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/21 (38%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -2
Query: 788 LFYTL-HLQQILTGAPLFCGN 729
L+Y + +++QI P++CGN
Sbjct: 107 LYYNINYIEQIPIPVPIYCGN 127
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/21 (38%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -2
Query: 788 LFYTL-HLQQILTGAPLFCGN 729
L+Y + +++QI P++CGN
Sbjct: 334 LYYNIINIEQIPVPVPIYCGN 354
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -2
Query: 776 LHLQQILTGAPLFCGN 729
++++QI P++CGN
Sbjct: 114 INIEQIPVPVPIYCGN 129
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -2
Query: 776 LHLQQILTGAPLFCGN 729
++++QI P++CGN
Sbjct: 114 INIEQIPVPVPIYCGN 129
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -2
Query: 776 LHLQQILTGAPLFCGN 729
++++QI P++CGN
Sbjct: 114 INIEQIPVPVPIYCGN 129
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -2
Query: 776 LHLQQILTGAPLFCGN 729
++++QI P++CGN
Sbjct: 114 INIEQIPVPVPIYCGN 129
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -2
Query: 776 LHLQQILTGAPLFCGN 729
++++QI P++CGN
Sbjct: 114 INIEQIPVPVPIYCGN 129
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -2
Query: 776 LHLQQILTGAPLFCGN 729
++++QI P++CGN
Sbjct: 114 INIEQIPVPVPIYCGN 129
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.6
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -2
Query: 776 LHLQQILTGAPLFCGN 729
++++QI P++CGN
Sbjct: 118 INIEQIPVPVPIYCGN 133
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -2
Query: 776 LHLQQILTGAPLFCGN 729
++++QI P++CGN
Sbjct: 114 INIEQIPVPVPIYCGN 129
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 8.6
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = +2
Query: 767 EDEEYKRVNFEKFTKXSTVSQKENGTVTAGXAST 868
EDEE + N T+TAG A+T
Sbjct: 202 EDEECTEATAGAVVLETCQRNSNNSTITAGNANT 235
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,871
Number of Sequences: 438
Number of extensions: 4802
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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