Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_P15
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    25   0.51 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   1.2  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.1  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   4.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   4.7  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   6.3  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   6.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   6.3  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   6.3  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   6.3  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   8.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.3  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   8.3  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   8.3  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   8.3  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   8.3  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   8.3  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   8.3  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   8.3  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   8.3  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   8.3  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 11/53 (20%), Positives = 27/53 (50%)
 Frame = +1

Query: 466 YVLRPSSFLQKALSEVSSKLFKEEFRFKVLVCSTVDELYEHFERSQLTPDLGG 624
           YV +  +    ++ +  +KL+++ +   + +  T+ E+Y  +ER  +   L G
Sbjct: 11  YVAKFFAITPSSIYDKPTKLYQKLYPVLMFLIYTITEIYSVYERRYMNAHLSG 63


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/47 (23%), Positives = 25/47 (53%)
 Frame = +1

Query: 463 VYVLRPSSFLQKALSEVSSKLFKEEFRFKVLVCSTVDELYEHFERSQ 603
           +Y  R   +L  A++ +   L   +FR   ++CS  +  + +F+R++
Sbjct: 333 LYFCRIMVYLNSAINPILYNLMSSKFRTGFIICSESNRKF-YFKRAR 378


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 194 ESFYCHNTRWPPEDWPKTTVPSSPSR 271
           ++F C   R PP DW  TT+  SP+R
Sbjct: 164 KTFMC---RCPP-DWEGTTLSQSPNR 185


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 373 IIVDRRKDRWNSVKTVLLRIS 435
           II  R+K +WNS+  +L  +S
Sbjct: 366 IITARKKQQWNSLIKILKTVS 386


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 683 ENFSKAIRCCIHSECEYCNSPPRSGV 606
           E   K I   + +EC  CN   + GV
Sbjct: 57  EELKKDIPDALQNECAKCNEKHKEGV 82


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 151 CDGCGSEGDEARNVGELL 204
           CD C S  +EA   GEL+
Sbjct: 577 CDVCYSTIEEANKAGELI 594


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 151 CDGCGSEGDEARNVGELL 204
           CD C S  +EA   GEL+
Sbjct: 302 CDVCYSTIEEANKAGELI 319


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 705 DEAGRFHARXSRLRYGKRSHTN 770
           D  G  H +  +L+YG  +H N
Sbjct: 48  DFFGNHHIQQQQLQYGYHNHQN 69


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 705 DEAGRFHARXSRLRYGKRSHTN 770
           D  G  H +  +L+YG  +H N
Sbjct: 48  DFFGNHHIQQQQLQYGYHNHQN 69


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 124 VPPWCYTSKTSC 89
           VP WCY ++  C
Sbjct: 581 VPRWCYQNEGEC 592


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 705 DEAGRFHARXSRLRYGKRSHTN 770
           D  G  H +  +L+YG  +H N
Sbjct: 48  DFFGNHHIQQQQLQYGYHNHQN 69


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 705 DEAGRFHARXSRLRYGKRSHTN 770
           D  G  H +  +L+YG  +H N
Sbjct: 48  DFFGNHHIQQQQLQYGYHNHQN 69


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 683 ENFSKAIRCCIHSECEYCNSPPRSGV 606
           E   K I   + +EC  CN   + G+
Sbjct: 56  EELKKDIPDALKNECAKCNDKHKEGI 81


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +3

Query: 246 PPSPHHLPGQQ*LSSH-HRLRVPKTV 320
           PP PHH P +  + ++ H +  P +V
Sbjct: 738 PPHPHHQPPRNPVGTNPHDINNPLSV 763


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +3

Query: 246 PPSPHHLPGQQ*LSSH-HRLRVPKTV 320
           PP PHH P +  + ++ H +  P +V
Sbjct: 630 PPHPHHQPPRNPVGTNPHDINNPLSV 655


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 224 PPEDWPKTTVPSSPSRTTITFISSP 298
           PP   P  + PS+ + T  + ++SP
Sbjct: 122 PPRSTPPLSTPSNSNATKSSGLTSP 146


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 224 PPEDWPKTTVPSSPSRTTITFISSP 298
           PP   P  + PS+ + T  + ++SP
Sbjct: 122 PPRSTPPLSTPSNSNATKSSGLTSP 146


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 224 PPEDWPKTTVPSSPSRTTITFISSP 298
           PP   P  + PS+ + T  + ++SP
Sbjct: 122 PPRSTPPLSTPSNSNATKSSGLTSP 146


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 224 PPEDWPKTTVPSSPSRTTITFISSP 298
           PP   P  + PS+ + T  + ++SP
Sbjct: 122 PPRSTPPLSTPSNSNATKSSGLTSP 146


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 224 PPEDWPKTTVPSSPSRTTITFISSP 298
           PP   P  + PS+ + T  + ++SP
Sbjct: 122 PPRSTPPLSTPSNSNATKSSGLTSP 146


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 224 PPEDWPKTTVPSSPSRTTITFISSP 298
           PP   P  + PS+ + T  + ++SP
Sbjct: 78  PPRSTPPLSTPSNSNATKSSGLTSP 102


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 224 PPEDWPKTTVPSSPSRTTITFISSP 298
           PP   P  + PS+ + T  + ++SP
Sbjct: 122 PPRSTPPLSTPSNSNATKSSGLTSP 146


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 224 PPEDWPKTTVPSSPSRTTITFISSP 298
           PP   P  + PS+ + T  + ++SP
Sbjct: 122 PPRSTPPLSTPSNSNATKSSGLTSP 146


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 224 PPEDWPKTTVPSSPSRTTITFISSP 298
           PP   P  + PS+ + T  + ++SP
Sbjct: 122 PPRSTPPLSTPSNSNATKSSGLTSP 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,225
Number of Sequences: 336
Number of extensions: 3875
Number of successful extensions: 34
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)