Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_P15
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated p... 73 2e-13
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 73 2e-13
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 73 2e-13
AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucle... 73 2e-13
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 73 2e-13
U58744-2|AAL65789.1| 95|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z75542-2|CAA99862.2| 712|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 36 0.042
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 36 0.042
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 36 0.042
Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical pr... 34 0.098
Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical p... 33 0.23
Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical pr... 33 0.23
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 33 0.23
AF098997-8|AAC68719.3| 335|Caenorhabditis elegans Serpentine re... 33 0.30
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 30 1.6
L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical pr... 30 1.6
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 30 2.1
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 30 2.1
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 29 4.9
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical p... 28 6.4
Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical p... 28 6.4
Z81460-2|CAB03831.1| 439|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical p... 28 6.4
Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical p... 28 6.4
U32305-8|AAK18853.4| 492|Caenorhabditis elegans Regulator of g ... 28 6.4
Z93377-4|CAB07578.2| 325|Caenorhabditis elegans Hypothetical pr... 28 8.5
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 28 8.5
>U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated
protein 73, isoform b protein.
Length = 1638
Score = 72.9 bits (171), Expect = 2e-13
Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Frame = +1
Query: 178 EARNVGELLLPQYALATGGLAKDHRPLITFPDNNNFHLITASEYRRLLLYLTSVPSILEA 357
+A ++ +L A+ GG + + +I P + R + LYL V S +
Sbjct: 11 KAEDILHVLRDGIAVLPGGRCRAGQAVIVCPSREQ--PVNQDNLRNVFLYLFEVTSKMAR 68
Query: 358 DMGFHIIVDRR-KDRWNSVKTVLLRISEFFPGIIHAVYVLRPSSFLQKALSEVSSKLFKE 534
+ GF +++D R K W +V+ +L +S V++++P F +K +++S L
Sbjct: 69 EKGFLVVIDMRGKQTWTNVRHILKALSSIESSSTVQVFIIKPEKFWEKQKAQMS--LGTW 126
Query: 535 EFRFKVLVCSTVDELYEHFERSQLTPDLGGELQYSHSEWIQQRIALEKFSTLMKETSTKL 714
+F +++ + + L + + S L +GG Y H EW++ R+ LEK+ + E KL
Sbjct: 127 DFEVEMI---SFESLIKIIDSSHLPKTVGGSYPYDHDEWLELRLDLEKWIWNITEIMEKL 183
Query: 715 DDFMHXIVDCDMGNDPT 765
+ I + + D T
Sbjct: 184 ESVRREICEGEQPVDVT 200
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 72.9 bits (171), Expect = 2e-13
Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Frame = +1
Query: 178 EARNVGELLLPQYALATGGLAKDHRPLITFPDNNNFHLITASEYRRLLLYLTSVPSILEA 357
+A ++ +L A+ GG + + +I P + R + LYL V S +
Sbjct: 11 KAEDILHVLRDGIAVLPGGRCRAGQAVIVCPSREQ--PVNQDNLRNVFLYLFEVTSKMAR 68
Query: 358 DMGFHIIVDRR-KDRWNSVKTVLLRISEFFPGIIHAVYVLRPSSFLQKALSEVSSKLFKE 534
+ GF +++D R K W +V+ +L +S V++++P F +K +++S L
Sbjct: 69 EKGFLVVIDMRGKQTWTNVRHILKALSSIESSSTVQVFIIKPEKFWEKQKAQMS--LGTW 126
Query: 535 EFRFKVLVCSTVDELYEHFERSQLTPDLGGELQYSHSEWIQQRIALEKFSTLMKETSTKL 714
+F +++ + + L + + S L +GG Y H EW++ R+ LEK+ + E KL
Sbjct: 127 DFEVEMI---SFESLIKIIDSSHLPKTVGGSYPYDHDEWLELRLDLEKWIWNITEIMEKL 183
Query: 715 DDFMHXIVDCDMGNDPT 765
+ I + + D T
Sbjct: 184 ESVRREICEGEQPVDVT 200
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 72.9 bits (171), Expect = 2e-13
Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Frame = +1
Query: 178 EARNVGELLLPQYALATGGLAKDHRPLITFPDNNNFHLITASEYRRLLLYLTSVPSILEA 357
+A ++ +L A+ GG + + +I P + R + LYL V S +
Sbjct: 11 KAEDILHVLRDGIAVLPGGRCRAGQAVIVCPSREQ--PVNQDNLRNVFLYLFEVTSKMAR 68
Query: 358 DMGFHIIVDRR-KDRWNSVKTVLLRISEFFPGIIHAVYVLRPSSFLQKALSEVSSKLFKE 534
+ GF +++D R K W +V+ +L +S V++++P F +K +++S L
Sbjct: 69 EKGFLVVIDMRGKQTWTNVRHILKALSSIESSSTVQVFIIKPEKFWEKQKAQMS--LGTW 126
Query: 535 EFRFKVLVCSTVDELYEHFERSQLTPDLGGELQYSHSEWIQQRIALEKFSTLMKETSTKL 714
+F +++ + + L + + S L +GG Y H EW++ R+ LEK+ + E KL
Sbjct: 127 DFEVEMI---SFESLIKIIDSSHLPKTVGGSYPYDHDEWLELRLDLEKWIWNITEIMEKL 183
Query: 715 DDFMHXIVDCDMGNDPT 765
+ I + + D T
Sbjct: 184 ESVRREICEGEQPVDVT 200
>AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine
nucleotide exchange factorUNC-73B protein.
Length = 1638
Score = 72.9 bits (171), Expect = 2e-13
Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Frame = +1
Query: 178 EARNVGELLLPQYALATGGLAKDHRPLITFPDNNNFHLITASEYRRLLLYLTSVPSILEA 357
+A ++ +L A+ GG + + +I P + R + LYL V S +
Sbjct: 11 KAEDILHVLRDGIAVLPGGRCRAGQAVIVCPSREQ--PVNQDNLRNVFLYLFEVTSKMAR 68
Query: 358 DMGFHIIVDRR-KDRWNSVKTVLLRISEFFPGIIHAVYVLRPSSFLQKALSEVSSKLFKE 534
+ GF +++D R K W +V+ +L +S V++++P F +K +++S L
Sbjct: 69 EKGFLVVIDMRGKQTWTNVRHILKALSSIESSSTVQVFIIKPEKFWEKQKAQMS--LGTW 126
Query: 535 EFRFKVLVCSTVDELYEHFERSQLTPDLGGELQYSHSEWIQQRIALEKFSTLMKETSTKL 714
+F +++ + + L + + S L +GG Y H EW++ R+ LEK+ + E KL
Sbjct: 127 DFEVEMI---SFESLIKIIDSSHLPKTVGGSYPYDHDEWLELRLDLEKWIWNITEIMEKL 183
Query: 715 DDFMHXIVDCDMGNDPT 765
+ I + + D T
Sbjct: 184 ESVRREICEGEQPVDVT 200
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine
nucleotide exchange factorUNC-73A protein.
Length = 2488
Score = 72.9 bits (171), Expect = 2e-13
Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Frame = +1
Query: 178 EARNVGELLLPQYALATGGLAKDHRPLITFPDNNNFHLITASEYRRLLLYLTSVPSILEA 357
+A ++ +L A+ GG + + +I P + R + LYL V S +
Sbjct: 11 KAEDILHVLRDGIAVLPGGRCRAGQAVIVCPSREQ--PVNQDNLRNVFLYLFEVTSKMAR 68
Query: 358 DMGFHIIVDRR-KDRWNSVKTVLLRISEFFPGIIHAVYVLRPSSFLQKALSEVSSKLFKE 534
+ GF +++D R K W +V+ +L +S V++++P F +K +++S L
Sbjct: 69 EKGFLVVIDMRGKQTWTNVRHILKALSSIESSSTVQVFIIKPEKFWEKQKAQMS--LGTW 126
Query: 535 EFRFKVLVCSTVDELYEHFERSQLTPDLGGELQYSHSEWIQQRIALEKFSTLMKETSTKL 714
+F +++ + + L + + S L +GG Y H EW++ R+ LEK+ + E KL
Sbjct: 127 DFEVEMI---SFESLIKIIDSSHLPKTVGGSYPYDHDEWLELRLDLEKWIWNITEIMEKL 183
Query: 715 DDFMHXIVDCDMGNDPT 765
+ I + + D T
Sbjct: 184 ESVRREICEGEQPVDVT 200
>U58744-2|AAL65789.1| 95|Caenorhabditis elegans Hypothetical
protein F55F1.1 protein.
Length = 95
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +1
Query: 439 FFPGIIHAVYVLRPSSFLQKALSEVSSKLFKEEFRFKVLVCSTVDELYEHFERSQLTPDL 618
FFPG I +V++P LQ+AL EV + + F+V+ + EL ++ LT D+
Sbjct: 5 FFPGKICVTFVIKPEGVLQRAL-EVGYRGAADTCSFQVIQLESSAELRKYIHHEFLTMDV 63
Query: 619 GGELQYSHSEWIQQRI 666
GG ++Y+H EW+Q R+
Sbjct: 64 GGLIKYNHLEWVQHRM 79
>Z75542-2|CAA99862.2| 712|Caenorhabditis elegans Hypothetical
protein F55D12.2 protein.
Length = 712
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/180 (20%), Positives = 74/180 (41%)
Frame = +1
Query: 202 LLPQYALATGGLAKDHRPLITFPDNNNFHLITASEYRRLLLYLTSVPSILEADMGFHIIV 381
+L + A GG ++ L+ + + Y L+ L + L F +++
Sbjct: 10 VLDRLAFVPGGTDREGNALLVISTSQ----VQECSYENLVSLLALLSDTLPPSTLFTVLL 65
Query: 382 DRRKDRWNSVKTVLLRISEFFPGIIHAVYVLRPSSFLQKALSEVSSKLFKEEFRFKVLVC 561
D R + +K L + + V +++P FL + +++ L + K ++
Sbjct: 66 DTRHIQLKQLKFYLRACQQALYKKVRQVLIIQPEKFLDQ--QKINFDLIVSGYTLKTVLV 123
Query: 562 STVDELYEHFERSQLTPDLGGELQYSHSEWIQQRIALEKFSTLMKETSTKLDDFMHXIVD 741
S + +L + + +QL GG L Y W+ +RI ++K+ + E D H + D
Sbjct: 124 S-MHKLSKFVDVNQLPEQFGGTLGYDPDSWLSKRIEIKKWQNYLVEVDA--DSSKHSLDD 180
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +2
Query: 245 TTVPSSPSRTTITFISSPPPSTEDCCSTS 331
TTVP++PS+TT T ++P P+T + +TS
Sbjct: 504 TTVPTTPSKTTATTTTTPKPTTTETATTS 532
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 227 PEDWPKTTVPSSPSRTTITFISSPPPSTEDCCSTS 331
P P TT SP T T +SP P+T +TS
Sbjct: 402 PSQKPTTTTTKSPVVITTTTKTSPKPTTSPSTTTS 436
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +2
Query: 245 TTVPSSPSRTTITFISSPPPSTEDCCSTS 331
TTVP++PS+TT T ++P P+T + +TS
Sbjct: 345 TTVPTTPSKTTATTTTTPKPTTTETATTS 373
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +2
Query: 245 TTVPSSPSRTTITFISSPPPSTEDCCSTS 331
TTVP++PS+TT T ++P P+T + +TS
Sbjct: 385 TTVPTTPSKTTATTTTTPKPTTTETATTS 413
>Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical
protein F18A11.2 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.098
Identities = 16/72 (22%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 436 EFFPGIIHAVYVLRPSSFLQKALSEVSSKLFKEEFRFKVLVCS--TVDELYEHFERSQLT 609
+ +P ++ + ++ SF+ L + S E+++ K+++ S + + +H ++ L
Sbjct: 178 DHYPQLLQKIIIVNAPSFVN-VLHQACSPFLPEDYKEKIVITSEPAIGAIQKHADKCFLP 236
Query: 610 PDLGGELQYSHS 645
DLGG+L+ + S
Sbjct: 237 SDLGGDLEKTTS 248
>Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical
protein F53F4.11 protein.
Length = 543
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 239 PKTTVPSSPSRTTITFISSPPPSTEDCCSTSPL 337
PKT P +PSRTT + + +P P T + +P+
Sbjct: 53 PKTPAPKTPSRTTKSTVDTPAPKTPTRAAKTPV 85
>Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical
protein T13H5.2 protein.
Length = 408
Score = 33.1 bits (72), Expect = 0.23
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 409 VKTVLLRISEFFPGIIHAVYVLRPSSFLQKALSEVSSKLFKE-EFRFKVLVCSTVDELYE 585
V T+L ++ E FP +I ++++ +F+Q S +S L K+ + + K+L L E
Sbjct: 192 VTTMLSQLQEMFPDVIRKIFIVNTPTFIQVLWSMISPCLAKQTQQKVKILGNDWKQHLKE 251
Query: 586 HFERSQLTPDLGG 624
+ L GG
Sbjct: 252 NIGEEVLFERWGG 264
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -3
Query: 145 LHGQPQAVPPWCYTSKTSCHPLLSTTSREMTPYTPAKASRHRQTHRP 5
L P A+PPW +SKT P+ T + P+ Q RP
Sbjct: 1412 LTSHPSAIPPWAISSKTLAPPVAPPTVTVPSNIAPSTTGHQSQQTRP 1458
>AF098997-8|AAC68719.3| 335|Caenorhabditis elegans Serpentine
receptor, class i protein54 protein.
Length = 335
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 416 VFTEFHLSFLLSTIMWKPISASSIEGTEVR*SNSLRY 306
+ T+FHL+FL+ + + PI A SI G +R +L +
Sbjct: 56 ILTDFHLTFLIQPVPFYPILAGSIMGFGIRLGATLHF 92
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 221 WPPEDWPKTTVP-SSPSRTTITFISSPPPST 310
+PP+ P T+ P SSP+ T + PPP T
Sbjct: 174 YPPQQPPSTSAPHSSPNNRTSLYNPQPPPKT 204
>L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical
protein F42H10.3 protein.
Length = 335
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 242 KTTVPSSPSRTTITFISSPPPSTEDCCSTSP 334
K V P+R F +PPPS+ STSP
Sbjct: 220 KAQVDKGPARFCADFAGAPPPSSNSISSTSP 250
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 245 TTVPSS-PSRTTITFISSPPPSTEDCCSTS 331
TTVPS+ P+ TT T ++P P+T STS
Sbjct: 601 TTVPSTTPTSTTTTTTTTPKPTTSTSTSTS 630
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 245 TTVPSS-PSRTTITFISSPPPSTEDCCSTS 331
TTVPS+ P+ TT T ++P P+T STS
Sbjct: 601 TTVPSTTPTSTTTTTTTTPKPTTSTSTSTS 630
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 200 FYCHNTRWPPEDWPKTTVPSSPSRTTITFISSPPPSTEDCCST 328
F+ +PP TT +P+ T T +PPP+T +T
Sbjct: 210 FFTTRRTFPPPTTTTTTTTQAPATTHFTREFTPPPTTRSFINT 252
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 200 FYCHNTRWPPEDWPKTTVPSSPSRTTITFISSPPPSTEDCCST 328
F+ +PP TT +P+ T T +PPP+T +T
Sbjct: 351 FFTTRRTFPPPTTTTTTTTQAPATTHFTREFTPPPTTRSFINT 393
>Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 206 CH--NTRWPPEDWPKTTVPSSPSRTTITFISSPPPSTE 313
CH N PP W T S S+ T F+ PPP T+
Sbjct: 123 CHPSNNSPPPSSWYAPT-SYSQSKETPVFVPPPPPPTD 159
>Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 206 CH--NTRWPPEDWPKTTVPSSPSRTTITFISSPPPSTE 313
CH N PP W T S S+ T F+ PPP T+
Sbjct: 123 CHPSNNSPPPSSWYAPT-SYSQSKETPVFVPPPPPPTD 159
>Z81460-2|CAB03831.1| 439|Caenorhabditis elegans Hypothetical
protein C04A11.2 protein.
Length = 439
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 204 TATIRAGHRRTGQRPPSP--HHLPGQQ*LSSHHRLRVPKTVALPHLCAFDTRSR 359
T +R RT SP PG SS+HR R+P T+ +P TRSR
Sbjct: 190 TRNVRPVTNRTSSSNVSPAAQVTPGT---SSNHRSRLPPTIRVPQSEPIGTRSR 240
>Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 206 CH--NTRWPPEDWPKTTVPSSPSRTTITFISSPPPSTE 313
CH N PP W T S S+ T F+ PPP T+
Sbjct: 123 CHPSNNSPPPSSWYAPT-SYSQSKETPVFVPPPPPPTD 159
>Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 206 CH--NTRWPPEDWPKTTVPSSPSRTTITFISSPPPSTE 313
CH N PP W T S S+ T F+ PPP T+
Sbjct: 123 CHPSNNSPPPSSWYAPT-SYSQSKETPVFVPPPPPPTD 159
>U32305-8|AAK18853.4| 492|Caenorhabditis elegans Regulator of g
protein signalingprotein 5 protein.
Length = 492
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1
Query: 372 VEAHICF*YRRHRGEVEQQSSVLGGGDEMKVIVVRE 265
V HIC +R+ V QQS+ +G G + + I+V++
Sbjct: 39 VNDHICIPAQRNSLTVAQQSADIGSGSDHEGIIVKQ 74
>Z93377-4|CAB07578.2| 325|Caenorhabditis elegans Hypothetical
protein F13A7.8 protein.
Length = 325
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 410 TEFHLSFLLSTIMWKPISASSIEG 339
T+ HLSFL+ I + PI A IEG
Sbjct: 58 TDTHLSFLMQPIPFYPILAGYIEG 81
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 227 PEDWPKTTVPSSPSRTTITFISSPPPSTEDC 319
P W TT P++P+ TT+ F + PP E C
Sbjct: 925 PPPWISTT-PTAPTTTTV-FTTHAPPPMEGC 953
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,011,977
Number of Sequences: 27780
Number of extensions: 383239
Number of successful extensions: 1397
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1386
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -