Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_P13
         (369 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    24   0.43 
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    24   0.57 
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    24   0.57 
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    24   0.57 
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    24   0.57 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   2.3  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    20   7.0  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    20   9.2  

>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.2 bits (50), Expect = 0.43
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +1

Query: 157 YLFKLILMNINLNYRAKFVVKTYVYFINKYSFS 255
           Y+F + L + + N+R + +VK +V  +  +S S
Sbjct: 450 YIFNMGLFDTSRNHRDRAMVKIFVDLLTSFSDS 482


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 0.57
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +1

Query: 157 YLFKLILMNINLNYRAKFVVKTYVYFINKYSFS 255
           Y+F + L + + N+R + ++K +V  +  +S S
Sbjct: 450 YIFNMGLFDTSRNHRDRAMIKIFVDLLTSFSDS 482


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 0.57
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +1

Query: 157 YLFKLILMNINLNYRAKFVVKTYVYFINKYSFS 255
           Y+F + L + + N+R + ++K +V  +  +S S
Sbjct: 450 YIFNMGLFDTSRNHRDRAMIKIFVDLLTSFSDS 482


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 0.57
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +1

Query: 157 YLFKLILMNINLNYRAKFVVKTYVYFINKYSFS 255
           Y+F + L + + N+R + ++K +V  +  +S S
Sbjct: 450 YIFNMGLFDTSRNHRDRAMIKIFVDLLTSFSDS 482


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 0.57
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +1

Query: 157 YLFKLILMNINLNYRAKFVVKTYVYFINKYSFS 255
           Y+F + L + + N+R + ++K +V  +  +S S
Sbjct: 450 YIFNMGLFDTSRNHRDRAMIKIFVDLLTSFSDS 482


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 181 NINLNYRAKFVVKTYVYFI 237
           N N+NY    +V+T  YF+
Sbjct: 29  NSNVNYSKIGIVQTVAYFV 47


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 46  KKKTVVPEDKFDSDESNAPATEGS 117
           K   +VP+  F+ +   AP+TE S
Sbjct: 238 KPTPLVPQQGFNMERLLAPSTEVS 261


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 148 INSYLFKLILMNIN 189
           INSYLF L L   N
Sbjct: 43  INSYLFSLSLAQNN 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,066
Number of Sequences: 336
Number of extensions: 678
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)