Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_P08
         (573 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RCH0 Cluster: Putative uncharacterized protein PY0581...    35   1.2  
UniRef50_Q8ILJ8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  

>UniRef50_Q7RCH0 Cluster: Putative uncharacterized protein PY05812;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05812 - Plasmodium yoelii yoelii
          Length = 667

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -3

Query: 514 LKYIYSKFNKKYQCRRDTNKRKYCLITSLVKHIAFSKCNSQNISRE 377
           L YIY    K+YQC +D  +    L   L K I + K N +NI  E
Sbjct: 376 LSYIYEHELKRYQCLKDERRNLEFLNICLYKDIKYKKENIKNIKNE 421


>UniRef50_Q8ILJ8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1431

 Score = 32.7 bits (71), Expect = 6.3
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +3

Query: 405 LLKAMCLTNDVIKQYFLLFVSRLHW--YFLLNLL*MYF 512
           LLK +C +NDV K+ FL       W  YF L L+ +YF
Sbjct: 836 LLKNICYSNDVEKKRFLFLFKMNKWLLYFFLYLMNIYF 873


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,199,820
Number of Sequences: 1657284
Number of extensions: 9457114
Number of successful extensions: 19398
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19391
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)