Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_P08
         (573 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.46 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   5.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.5  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   7.5  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   9.9  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   9.9  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 11/47 (23%), Positives = 24/47 (51%)
 Frame = +3

Query: 387 MFCELHLLKAMCLTNDVIKQYFLLFVSRLHWYFLLNLL*MYFKCIIL 527
           +F  +HLL  +CL    +   FL  +   +  F++  + + F C+++
Sbjct: 187 IFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLI 233



 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 399 LHLLKAMCLTNDVIKQYFLLFVSRLHWYFLL 491
           +HLL  +C+   V+  +FLL +   +  F++
Sbjct: 125 VHLLFLLCIYYFVVPLFFLLCIYYFYCAFII 155



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 446 IFSLICISSALVFFIEFTINVL 511
           +F L+CI      FI FT+++L
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLL 161


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 421 HIAFSKCNSQNISRERSNKRSKMSL 347
           HI+F  C+S   S++ + +R K  +
Sbjct: 344 HISFMACSSAGCSQKVAEERHKTDI 368


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 206  LVVTNGDQ*LPVTTTDHSVEQKFMEVTFLVTSVIFECDSILS 331
            L  T+G   +  T      EQ   E    V +++   DSIL+
Sbjct: 1178 LAYTSGGDGVRTTPIHCQTEQDVPEAPIAVKALVMSTDSILA 1219



 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 504  FIVNSIKNTSADEIQIRENI 445
            F++   K TS + IQ+  N+
Sbjct: 1524 FVIEHKKKTSTEWIQVSNNV 1543


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 362 IKDVTCFRKIKIRLNHIQKL 303
           I+  TC   I  R+NH++K+
Sbjct: 172 IQFATCAHLILQRVNHVKKI 191


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 306 FLNVIQSYLYFSKTSDIFDRL 368
           F+N  QSY + + TS+ F R+
Sbjct: 129 FVNEKQSYFHIATTSNEFIRV 149


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 176 VVTSARRPW 202
           VVTS+ RPW
Sbjct: 66  VVTSSNRPW 74


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 176 VVTSARRPW 202
           VVTS+ RPW
Sbjct: 67  VVTSSNRPW 75


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 176 VVTSARRPW 202
           VVTS+ RPW
Sbjct: 67  VVTSSNRPW 75


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 297 VTKNVTSINFCST 259
           +T+N T+INF ST
Sbjct: 351 MTQNSTNINFVST 363


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,834
Number of Sequences: 336
Number of extensions: 2608
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)