Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_O22
         (803 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.71 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   5.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   6.6  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 16/46 (34%), Positives = 19/46 (41%)
 Frame = +1

Query: 460  WSTKPFVWTSGTNIWPAGSDIRTTDSVVWATDLQTHTPSLRTAPET 597
            W+TKP  W S T   P      TT +    T  +  T S  T P T
Sbjct: 1035 WTTKPSTWWSSTTTSPWW----TTTTTRRTTTTRPTTTSTTTRPTT 1076



 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +3

Query: 546 GHRFTNPYSQSTDRPRNHLTV 608
           GH FT  Y  S   PR  L V
Sbjct: 845 GHNFTMEYLVSRGAPRGKLLV 865


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 617 HTVHRKMVSGAVRRLGVWV 561
           H VHRK++  ++ R+GV V
Sbjct: 402 HRVHRKIMVQSLGRVGVLV 420


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 617 HTVHRKMVSGAVRRLGVWV 561
           H VHRK++  ++ R+GV V
Sbjct: 127 HRVHRKIMVQSLGRVGVLV 145


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/34 (23%), Positives = 15/34 (44%)
 Frame = +1

Query: 652  FEIRHPNDCKGAPQISNIQEDSDNAGCSLYVACD 753
            +  + PN+     +  +I    D A C +Y  C+
Sbjct: 905  YTTKDPNEVTCDEEEGHISYHPDKADCRMYYMCE 938



 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 595 FRGRSVDWEY 566
           F G  VDWEY
Sbjct: 632 FNGLDVDWEY 641


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
 Frame = +2

Query: 503 GPPAQTYGPPTQSYGPP---IYKPILPVYGPPPK 595
           GP   +  PPT  YG P   +  P+  +   P K
Sbjct: 432 GPYQPSQAPPTYDYGIPQGVVLNPLDAICNKPRK 465


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 569 LPVYGPPPKPSY 604
           LP++ PPP P Y
Sbjct: 158 LPLHYPPPPPVY 169


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 503 GPPAQTYGPPTQSYGPP 553
           GP   +  PPT  YG P
Sbjct: 432 GPYQPSQAPPTYDYGIP 448


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,601
Number of Sequences: 336
Number of extensions: 3745
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)