Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_O22
(803 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 34 0.027
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.14
SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces ... 29 0.58
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 28 1.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.4
SPBC32F12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 27 2.4
SPAC323.01c |||mitochondrial NADH kinase |Schizosaccharomyces po... 27 3.1
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 27 4.1
SPAC922.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 5.5
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 26 7.2
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 7.2
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 33.9 bits (74), Expect = 0.027
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1612 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1648
Score = 33.9 bits (74), Expect = 0.027
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1619 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1655
Score = 33.9 bits (74), Expect = 0.027
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1626 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1662
Score = 33.9 bits (74), Expect = 0.027
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1633 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1669
Score = 33.9 bits (74), Expect = 0.027
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1640 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1676
Score = 33.9 bits (74), Expect = 0.027
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1647 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1683
Score = 33.9 bits (74), Expect = 0.027
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1654 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1690
Score = 33.9 bits (74), Expect = 0.027
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1661 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1697
Score = 33.9 bits (74), Expect = 0.027
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1668 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1704
Score = 33.9 bits (74), Expect = 0.027
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1675 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1711
Score = 33.9 bits (74), Expect = 0.027
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1682 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1718
Score = 33.9 bits (74), Expect = 0.027
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1689 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1725
Score = 33.9 bits (74), Expect = 0.027
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1696 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1732
Score = 33.9 bits (74), Expect = 0.027
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1703 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1739
Score = 33.9 bits (74), Expect = 0.027
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1710 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1746
Score = 32.3 bits (70), Expect = 0.083
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1571 YMPSSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1606
Score = 31.5 bits (68), Expect = 0.14
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGP 586
+Y P + +Y P + SY P P Y P P Y P
Sbjct: 1717 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1748
Score = 30.7 bits (66), Expect = 0.25
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y PSY
Sbjct: 1577 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-ATSPSY 1613
Score = 30.7 bits (66), Expect = 0.25
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P Y P P Y P PSY
Sbjct: 1591 SYSPTSPSYSPTSPSYSATSPSYSPTSPSYS-PTSPSY 1627
Score = 30.7 bits (66), Expect = 0.25
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y + SY P P Y P P Y P PSY
Sbjct: 1598 SYSPTSPSYSATSPSYSPTSPSYSPTSPSYS-PTSPSY 1634
Score = 30.7 bits (66), Expect = 0.25
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y + +Y P + SY P P Y P P Y P PSY
Sbjct: 1605 SYSATSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1641
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 506 PPAQTYGPPTQSYGPPIYKPILPVYGPPPKPS 601
PP + PP S PP +P PV PP PS
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGPPI--YKPILPVYGPPP 592
T PP + PP+ + PPI P +P PPP
Sbjct: 141 TSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
>SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 87
Score = 29.5 bits (63), Expect = 0.58
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +2
Query: 494 QTYGPPAQTYGPPTQSYGPPIYKPILPVYGPPPKPSYGVPYG 619
Q YG PP Q+YG P Y P Y P+ Y P G
Sbjct: 5 QFYGDKGYAPAPPQQAYGGPNYYPPQQNY---PQQGYAPPQG 43
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/75 (22%), Positives = 32/75 (42%)
Frame = +1
Query: 520 IRTTDSVVWATDLQTHTPSLRTAPETILRCTVWHGRF*FLRQTVFEIRHPNDCKGAPQIS 699
+RT +V W D + H ++ A + RC + HG + ++R P +I
Sbjct: 528 VRTNVAVQWMVDARDHMWNVSRAIKNAKRCIMIHG---WWLSPELQMRRPYSMAHKWRID 584
Query: 700 NIQEDSDNAGCSLYV 744
I + + G +Y+
Sbjct: 585 RILNEKAHEGVMVYI 599
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 2.4
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +2
Query: 494 QTYGPP---AQTYGPPTQSYGPPIYKPILPVYGPPPKPSYGVPYGMA 625
Q+ PP A T PP S PP P +P GPP P +P A
Sbjct: 1695 QSAAPPQMSAPTPPPPPMSVPPPPSAPPMPA-GPPSAPPPPLPASSA 1740
>SPBC32F12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 27.5 bits (58), Expect = 2.4
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = -1
Query: 602 KMVSGAVRRLGVWVCKSVAHTTESVVRMSEP 510
K + ++ G+W+CK VA + + + +P
Sbjct: 108 KFIYSIFKQTGIWICKQVADESSLIEMLKKP 138
>SPAC323.01c |||mitochondrial NADH kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 140 VTKTDTLKADSYLAAYSKSRIEAEKAKQGVIIVTAKDG 253
+T+TD K SYL Y+ + I + K II DG
Sbjct: 98 ITETDVAKKFSYLNLYTWTEISDLEQKVDAIITVGGDG 135
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 555 FTNPYSQSTDRPRNHLTVYRMAW 623
F NP D P NHL V +AW
Sbjct: 564 FKNPDILLLDEPTNHLDVVNVAW 586
>SPAC922.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 117
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 670 NDCKGAPQISNIQEDSDNAGCSLYV 744
N C+ P I++I +D A C++YV
Sbjct: 57 NKCQAYPNINSINALTDGAVCTVYV 81
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 506 PPAQTYGPPTQSYGPPIYKPILP 574
PP+ TYGPP P P P
Sbjct: 420 PPSHTYGPPPPVQPKPKISPTTP 442
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 506 PPAQTYGPPTQSYGPPIYKPILPVYGPPPKPSYGVPYGMAG 628
PP PT + P P P+ G PP P P G+AG
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP--PPPGVAG 772
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,995,067
Number of Sequences: 5004
Number of extensions: 58956
Number of successful extensions: 205
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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