Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_O22
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 37 0.019
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 35 0.059
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 35 0.059
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 33 0.24
AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical... 33 0.32
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 0.73
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.97
Z29561-5|CAA82668.1| 395|Caenorhabditis elegans Hypothetical pr... 31 1.3
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL132948-10|CAC51066.1| 366|Caenorhabditis elegans Hypothetical... 30 2.2
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 30 2.2
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 30 2.2
U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 2.9
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 2.9
AF039048-6|AAB94235.1| 91|Caenorhabditis elegans Hypothetical ... 29 2.9
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 29 3.9
AF039049-11|AAB94246.1| 499|Caenorhabditis elegans Cytochrome p... 29 5.1
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z54306-6|CAA91090.2| 321|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical pr... 28 6.8
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 28 6.8
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL031268-1|CAD59161.1| 321|Caenorhabditis elegans Hypothetical ... 28 6.8
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 28 6.8
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 28 9.0
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical pr... 28 9.0
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr... 28 9.0
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 28 9.0
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 28 9.0
AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical... 28 9.0
AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical... 28 9.0
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +2
Query: 506 PPAQTYGPPTQSYGPPIYKPILPVYGPPPKPSYGVPYG 619
PP T+ P S GPP+ P+ P G P P YG YG
Sbjct: 224 PPKPTFAHPGPSMGPPMGPPMGPPMGHPQAPQYGQNYG 261
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGPPIYKPILPVYGPPPKP--SYGVP 613
+YGPP +Y PP SYG P P Y P +P SYG P
Sbjct: 83 SYGPPQPSYSPPKSSYGRP-----EPTYSPYSRPSSSYGRP 118
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 35.1 bits (77), Expect = 0.059
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
Y P + TY P + +Y P P Y P P Y P PSY
Sbjct: 1675 YSPTSPTYSPTSPTYSPTSPTYSPTSPTYS-PTSPSY 1710
Score = 34.7 bits (76), Expect = 0.078
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSYG 607
Y P + TY P + SY P P Y P P Y P P G
Sbjct: 1778 YSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPG 1815
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1611 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1647
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1618 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1654
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1625 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PSSPSY 1661
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGP--PIYKPILPVYGP------PPKPSYGVPYGMAGFN 634
Y P + TY P + SY P P Y P P Y P P P+Y P GF+
Sbjct: 1723 YSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYN-PTSPRGFS 1774
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1632 SYSPTSPSYSPTSPSYSPTSPSYSPSSPSYS-PSSPSY 1668
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P P+Y
Sbjct: 1653 SYSPSSPSYSPSSPSYSPSSPRYSPTSPTYS-PTSPTY 1689
Score = 31.9 bits (69), Expect = 0.55
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P P+Y
Sbjct: 1646 SYSPTSPSYSPSSPSYSPSSPSYSPSSPRYS-PTSPTY 1682
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + Y P P Y P P Y P P+Y
Sbjct: 1660 SYSPSSPSYSPSSPRYSPTSPTYSPTSPTYS-PTSPTY 1696
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P P Y
Sbjct: 1639 SYSPTSPSYSPTSPSYSPSSPSYSPSSPSYS-PSSPRY 1675
Score = 31.5 bits (68), Expect = 0.73
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGP--PIYKPILPVYGP 586
Y P + TY P + +Y P P Y P P Y P
Sbjct: 1820 YSPTSPTYSPSSPTYSPASPSYSPSSPTYDP 1850
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVY 580
TY P + TY P + +Y P P Y P P Y
Sbjct: 1681 TYSPTSPTYSPTSPTYSPTSPTYSPTSPSY 1710
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSYGVP 613
+Y P + Y P + Y P P Y P P Y P + P
Sbjct: 1736 SYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSP 1776
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +2
Query: 506 PPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1607 PVSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1640
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
Y P + Y P + +Y P P Y P P Y P P Y
Sbjct: 1716 YSPSSPKYSPSSPTYSPTSPSYSPTSPQYS-PTSPQY 1751
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKP 565
TY P + TY P + SY P P Y P
Sbjct: 1826 TYSPSSPTYSPASPSYSPSSPTYDP 1850
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 35.1 bits (77), Expect = 0.059
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
Y P + TY P + +Y P P Y P P Y P PSY
Sbjct: 1682 YSPTSPTYSPTSPTYSPTSPTYSPTSPTYS-PTSPSY 1717
Score = 34.7 bits (76), Expect = 0.078
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSYG 607
Y P + TY P + SY P P Y P P Y P P G
Sbjct: 1785 YSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPG 1822
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1618 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1654
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1625 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1661
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1632 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PSSPSY 1668
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGP--PIYKPILPVYGP------PPKPSYGVPYGMAGFN 634
Y P + TY P + SY P P Y P P Y P P P+Y P GF+
Sbjct: 1730 YSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYN-PTSPRGFS 1781
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1639 SYSPTSPSYSPTSPSYSPTSPSYSPSSPSYS-PSSPSY 1675
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P P+Y
Sbjct: 1660 SYSPSSPSYSPSSPSYSPSSPRYSPTSPTYS-PTSPTY 1696
Score = 31.9 bits (69), Expect = 0.55
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P P+Y
Sbjct: 1653 SYSPTSPSYSPSSPSYSPSSPSYSPSSPRYS-PTSPTY 1689
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + Y P P Y P P Y P P+Y
Sbjct: 1667 SYSPSSPSYSPSSPRYSPTSPTYSPTSPTYS-PTSPTY 1703
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
+Y P + +Y P + SY P P Y P P Y P P Y
Sbjct: 1646 SYSPTSPSYSPTSPSYSPSSPSYSPSSPSYS-PSSPRY 1682
Score = 31.5 bits (68), Expect = 0.73
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGP--PIYKPILPVYGP 586
Y P + TY P + +Y P P Y P P Y P
Sbjct: 1827 YSPTSPTYSPSSPTYSPASPSYSPSSPTYDP 1857
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVY 580
TY P + TY P + +Y P P Y P P Y
Sbjct: 1688 TYSPTSPTYSPTSPTYSPTSPTYSPTSPSY 1717
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSYGVP 613
+Y P + Y P + Y P P Y P P Y P + P
Sbjct: 1743 SYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSP 1783
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +2
Query: 506 PPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
P + +Y P + SY P P Y P P Y P PSY
Sbjct: 1614 PVSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSY 1647
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGP--PIYKPILPVYGPPPKPSY 604
Y P + Y P + +Y P P Y P P Y P P Y
Sbjct: 1723 YSPSSPKYSPSSPTYSPTSPSYSPTSPQYS-PTSPQY 1758
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = +2
Query: 497 TYGPPAQTYGPPTQSYGP--PIYKP 565
TY P + TY P + SY P P Y P
Sbjct: 1833 TYSPSSPTYSPASPSYSPSSPTYDP 1857
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Frame = +2
Query: 491 AQTYGPPAQTYGPPT-----QSYGPPIYKPILPVYGPPPKPS 601
AQT P + YG P Q P +++ IL GPPP+PS
Sbjct: 374 AQTSAPHSTPYGTPKDTHIQQQQQPVVFEEILTANGPPPQPS 415
>AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical
protein Y47D7A.11 protein.
Length = 129
Score = 32.7 bits (71), Expect = 0.32
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = +2
Query: 491 AQTYGPPAQTYGPPTQSYGPPIYKPILPVYGPPP----KPSYGVP 613
A+ P +Y P SY P P+ P Y PP KPSY P
Sbjct: 22 AENSYPTTPSYPTPPPSYPTPKKYPVAPTYPSPPAYAQKPSYSAP 66
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.5 bits (68), Expect = 0.73
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 503 GPPAQTYGPPTQSYG-PPIYKPILPVYGPPPKPSYGVPYGMAGF 631
G P + PP Y PP Y P YG PP+ G P+ G+
Sbjct: 89 GMPPMEWRPPGAEYQMPPGYPAGYPPYGMPPRHHPGYPHPAYGY 132
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 491 AQTYGPPAQTYGPPTQSYGPPIYKPILPVYGPP-PKPS 601
A Y PP YG P Q PP+ P V PP P P+
Sbjct: 129 AYGYPPPGAPYGYPPQMMRPPMMAPGDMVRMPPGPTPT 166
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 0.97
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGPPIYKPILPVYGPPPKPSYGVPYGMAG 628
+ PP +G P GP Y P P GP SYG P G G
Sbjct: 390 FAPPPSAFGAPQGPGGPGGYGP-PPPGGPGAPGSYGPPQGGPG 431
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 494 QTYG-PPAQTYGPPTQSYGPPIYKPILPVYGPPPKPSYGVP 613
Q +G PP Q G P Q +G P P P G PP+ S+G P
Sbjct: 316 QQFGAPPPQ--GAPQQGFGAP---PQGPPQGGPPQGSFGAP 351
>Z29561-5|CAA82668.1| 395|Caenorhabditis elegans Hypothetical
protein R10E12.2 protein.
Length = 395
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 515 QTYGPPTQSYGPPIYKPILPVYGPP 589
QTY PP S PPI+ P ++ PP
Sbjct: 347 QTYRPPPPSVHPPIFPPQTQLFHPP 371
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 512 AQTYGPPTQSYGPPIYKPILPVYGPPPKPSYGVPYGMAG 628
+++ GP YGPP++ P PPP P+ G+ AG
Sbjct: 546 SRSKGPTGDGYGPPVFPGGAP---PPPVPAVGLGGAAAG 581
>AL132948-10|CAC51066.1| 366|Caenorhabditis elegans Hypothetical
protein Y39B6A.11 protein.
Length = 366
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 527 PPTQSYGPPIYKPILPVYGPPPKP 598
PPTQ+ PP+ + PV PP +P
Sbjct: 236 PPTQTVVPPVLQEAPPVIAPPTEP 259
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 515 QTYGPPTQSYGPPIYKPILPVYGPPPKPS 601
Q G PT+S PP+ P LP+ PP KP+
Sbjct: 64 QQVGRPTES--PPLPPPPLPLSNPPAKPT 90
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 515 QTYGPPTQSYGPPIYKPILPVYGPPPKPS 601
Q G PT+S PP+ P LP+ PP KP+
Sbjct: 286 QQVGRPTES--PPLPPPPLPLSNPPAKPT 312
>U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical
protein F22H10.3 protein.
Length = 79
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 506 PPAQTYGPPTQSYGPPIYKPILPVYGPPPKP 598
PP Y PP Y PPI PI P+ P P P
Sbjct: 13 PPPVGYVPPPMGYAPPI-API-PMVAPMPVP 41
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGPPIYKPILPVYGPPPKPSYGVPYGMAG 628
YGPP GPP G Y GPPP G PYG G
Sbjct: 671 YGPPGGGQGPPPPPQGQQYYG------GPPPP---GQPYGPPG 704
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGPPIYKPILPVYGPPPKPSYGVPYGMAG 628
YGPP GPP G Y GPPP G PYG G
Sbjct: 671 YGPPGGGQGPPPPPQGQQYYG------GPPPP---GQPYGPPG 704
>AF039048-6|AAB94235.1| 91|Caenorhabditis elegans Hypothetical
protein F16B4.4 protein.
Length = 91
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGPP 553
YG PA YGPP+ YG P
Sbjct: 22 YGRPAGGYGPPSGGYGAP 39
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +2
Query: 506 PPAQTYGPPTQSYGPPIYKPILPVYGPPPKPSYGV-PYGMAGFNFFDK 646
PP +Y P + P +Y P PPP P G+ M + F K
Sbjct: 325 PPPYSYYPVAPAAAPQVYHYAPPPPPPPPHPQQGLYQQNMMAYKKFKK 372
>AF039049-11|AAB94246.1| 499|Caenorhabditis elegans Cytochrome p450
family protein 35B2 protein.
Length = 499
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 496 NIWPAGSDIRTTDSVVWATDLQTHTPSLRTAPETILRCT 612
++W AG D TT V L H +R E ILR T
Sbjct: 304 DLWLAGQDTTTTTLVSGFNQLVNHPEVIRKCREEILRIT 342
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 503 GPPAQTYGPPTQSYGPPIYKPILPVYGPPPKPSYGVP 613
GPP T P Q + P P +P PPP +YG+P
Sbjct: 108 GPPMPTPMPFPQHFPFPGMPP-MPSGPPPPSMAYGMP 143
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 503 GPPAQTYGPPTQSYGPPIYKPILPVYGPPPKPSYGVP 613
GPP T P Q + P P +P PPP +YG+P
Sbjct: 108 GPPMPTPMPFPQHFPFPGMPP-MPSGPPPPSMAYGMP 143
>Z54306-6|CAA91090.2| 321|Caenorhabditis elegans Hypothetical
protein B0457.2 protein.
Length = 321
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 489 RHKHMARRLRHTDHRLSRMGHRFTNPYSQSTDRPRNHLTVYRMAWPVL 632
R+ H R+ +H HR S GH + +PY Q + ++H + +P L
Sbjct: 115 RYSH--RKHKH-HHRKSHRGHHYGSPYQQYYQQQQHHDPLTYRVYPGL 159
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -2
Query: 634 IKTGHAIRYTVRWFRGRSVDWEYGFVNR 551
+ T +++T+R F +VD++YGF +R
Sbjct: 300 VNTNSRLKHTIRVFGHGAVDFKYGFASR 327
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -2
Query: 634 IKTGHAIRYTVRWFRGRSVDWEYGFVNR 551
+ T +++T+R F +VD++YGF +R
Sbjct: 300 VNTNSRLKHTIRVFGHGAVDFKYGFASR 327
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -2
Query: 634 IKTGHAIRYTVRWFRGRSVDWEYGFVNR 551
+ T +++T+R F +VD++YGF +R
Sbjct: 300 VNTNSRLKHTIRVFGHGAVDFKYGFASR 327
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -2
Query: 634 IKTGHAIRYTVRWFRGRSVDWEYGFVNR 551
+ T +++T+R F +VD++YGF +R
Sbjct: 300 VNTNSRLKHTIRVFGHGAVDFKYGFASR 327
>Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical protein
T20G5.1 protein.
Length = 1681
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +2
Query: 497 TYGPPA--QTYGPPTQSYGPPIYKPILPVYGPPPKPSYGVP 613
TYG PA TY T YG P YG P +P Y P
Sbjct: 1644 TYGAPAPQMTYPGTTGGYGGQ------PAYGQPGQPGYNAP 1678
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGPPIYKPILPVYGPPPKPSYGVPYGMAGF 631
YG P G Y PP +P Y PPP G +G+
Sbjct: 37 YGAPPPPVGAGV-GYAPPPPRPYGATYAPPPPMGIGAGVNPSGY 79
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 527 PPTQSYGPPIYKPILPVYGPPPKPS 601
PP++S GPP P+ GPP P+
Sbjct: 116 PPSRSGGPPAPMPVSRAGGPPRAPT 140
>AL031268-1|CAD59161.1| 321|Caenorhabditis elegans Hypothetical
protein B0457.2 protein.
Length = 321
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 489 RHKHMARRLRHTDHRLSRMGHRFTNPYSQSTDRPRNHLTVYRMAWPVL 632
R+ H R+ +H HR S GH + +PY Q + ++H + +P L
Sbjct: 115 RYSH--RKHKH-HHRKSHRGHHYGSPYQQYYQQQQHHDPLTYRVYPGL 159
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -2
Query: 634 IKTGHAIRYTVRWFRGRSVDWEYGFVNR 551
+ T +++T+R F +VD++YGF +R
Sbjct: 300 VNTNSRLKHTIRVFGHGAVDFKYGFASR 327
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +2
Query: 506 PPAQTYGPPT-QSYG--PPIYKPILPVYGPPPK-PSYGV 610
PP GPP + +G PP + PI YG PP+ P GV
Sbjct: 1006 PPPVIMGPPIIRPFGAPPPQFIPIQSNYGRPPQFPPIGV 1044
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +2
Query: 506 PPAQTYGPPT-QSYG--PPIYKPILPVYGPPPK-PSYGV 610
PP GPP + +G PP + PI YG PP+ P GV
Sbjct: 1006 PPPVIMGPPIIRPFGAPPPQFIPIQSNYGRPPQFPPIGV 1044
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +2
Query: 506 PPAQT-YGP-PTQSYGPPIYKPILPVYGPPPKPSYGVPYGM 622
PP Q Y P P P + P YG P+P Y P G+
Sbjct: 173 PPVQPGYNPRPASGQSYPSGPQVPPAYGQYPQPGYPQPAGV 213
>Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical
protein AC3.6 protein.
Length = 325
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = +2
Query: 500 YGPPAQTYGPPTQSYGPPIY---KPILPVYGPPPKPSY 604
YG P PPT SY P P++ GPP +P +
Sbjct: 78 YGQPRYVTIPPTNSYAVPEVGGSMPLICPEGPPGRPGH 115
>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
protein T20F7.5 protein.
Length = 1065
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 563 PILPVYGPPPKPSYGVPYGMAGFNF 637
P+ Y PPP YGVP GFNF
Sbjct: 84 PVASFYPPPPPRVYGVP---NGFNF 105
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +2
Query: 527 PPTQSYGPPIYKPILPVY---GPPPKPSY 604
PP Q PPI P+ P++ PP P+Y
Sbjct: 372 PPVQITQPPIQTPVQPIFFQTTRPPMPTY 400
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +2
Query: 527 PPTQSYGPPIYKPILPVY---GPPPKPSY 604
PP Q PPI P+ P++ PP P+Y
Sbjct: 469 PPVQITQPPIQTPVQPIFFQTTRPPMPTY 497
>AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical
protein Y54G2A.26b protein.
Length = 549
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 509 PAQTYGPPTQSYGPPIYKPILPVYGPPPKPSYGVP 613
P + G Q P Y P+ G PP SYG P
Sbjct: 53 PMMSPGMHGQQQQQPYYNTQSPLTGTPPSMSYGTP 87
>AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical
protein Y54G2A.26a protein.
Length = 611
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 509 PAQTYGPPTQSYGPPIYKPILPVYGPPPKPSYGVP 613
P + G Q P Y P+ G PP SYG P
Sbjct: 115 PMMSPGMHGQQQQQPYYNTQSPLTGTPPSMSYGTP 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,758,089
Number of Sequences: 27780
Number of extensions: 351392
Number of successful extensions: 1475
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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