Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_O19
         (550 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF078781-4|AAC26918.1|  255|Caenorhabditis elegans Hypothetical ...    31   0.55 
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr...    29   2.9  
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family...    28   3.9  
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase...    28   5.1  
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase...    28   5.1  
AF077544-2|AAK39243.2|  644|Caenorhabditis elegans Hypothetical ...    28   5.1  
AF068714-7|AAT68905.1|  592|Caenorhabditis elegans Egg laying de...    28   5.1  
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de...    28   5.1  
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de...    28   5.1  
Z74036-3|CAA98488.1|  517|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z68882-11|CAA93104.1|  520|Caenorhabditis elegans Hypothetical p...    27   8.9  
AB040993-1|BAB21561.1|  520|Caenorhabditis elegans CeCRMP/DHP-2 ...    27   8.9  

>AF078781-4|AAC26918.1|  255|Caenorhabditis elegans Hypothetical
           protein B0545.4 protein.
          Length = 255

 Score = 31.1 bits (67), Expect = 0.55
 Identities = 19/62 (30%), Positives = 32/62 (51%)
 Frame = +2

Query: 212 EDAIEVIRAGEYREDEPFQNLVYCAYKKFGALDENNRIISQVAAASFPKDIDVVTVIESC 391
           ++ +E IRA E  +DEP+ N V   Y  FG   E    ++++    F  ++ +   I+S 
Sbjct: 68  DEVLEFIRAVEKEDDEPYSN-VDSEYDDFGDSSEVTEPVAKIQKTDF--ELYIQEKIKSR 124

Query: 392 GK 397
           GK
Sbjct: 125 GK 126


>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
            M03A8.2 protein.
          Length = 2275

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
 Frame = +2

Query: 152  EVAKKLKVLIQECLNEN------GLGEDAIEVIRAGEYRED--EPFQNLVYCAYKKFGAL 307
            +V K+++ +IQE +NEN       +GEDA+      + + D  E  ++  + A + F   
Sbjct: 1346 DVEKRIQAMIQEAVNENDERDGIAIGEDAVREFATIQPKHDANETNESFEHVASRNFSVT 1405

Query: 308  DE 313
            D+
Sbjct: 1406 DD 1407


>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
            protein 3 protein.
          Length = 3343

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = -1

Query: 253  LSIFTGTYYFYRVFTQAVFIQTLLNQDFQFFSHLRGETD 137
            + IF  T+ FY+  +  +F++ LL   +QF   ++ ++D
Sbjct: 2609 IDIFDKTHLFYQNGSSLIFLKPLLPGTYQFSLQIKSQSD 2647


>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
           beta protein.
          Length = 1418

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 164 KLKVLIQECLNENGLGEDAIEVIRAGEYREDEPFQNLVYCA 286
           K + ++Q+CLN+ GLG D     R       + F+N   C+
Sbjct: 174 KPEKMVQKCLNDLGLGGDKYTPARVINRSMGKKFRNFYKCS 214


>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
           beta homolog EGL-8 protein.
          Length = 1431

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 164 KLKVLIQECLNENGLGEDAIEVIRAGEYREDEPFQNLVYCA 286
           K + ++Q+CLN+ GLG D     R       + F+N   C+
Sbjct: 176 KPEKMVQKCLNDLGLGGDKYTPARVINRSMGKKFRNFYKCS 216


>AF077544-2|AAK39243.2|  644|Caenorhabditis elegans Hypothetical
           protein H22K11.2 protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +2

Query: 266 QNLVYCAYKKFGALDENNRIISQVAAASFPKDIDVVTVIESCGKEDGNTPV 418
           QN V   YK+FG++  NN I  Q     F   +++  +IE  G++  N PV
Sbjct: 446 QNFVGALYKQFGSI-HNNTIDVQGCLDQF-NSLEI--IIEITGRDHNNYPV 492


>AF068714-7|AAT68905.1|  592|Caenorhabditis elegans Egg laying
           defective protein 8,isoform c protein.
          Length = 592

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 164 KLKVLIQECLNENGLGEDAIEVIRAGEYREDEPFQNLVYCA 286
           K + ++Q+CLN+ GLG D     R       + F+N   C+
Sbjct: 176 KPEKMVQKCLNDLGLGGDKYTPARVINRSMGKKFRNFYKCS 216


>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
           defective protein 8,isoform a protein.
          Length = 1419

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 164 KLKVLIQECLNENGLGEDAIEVIRAGEYREDEPFQNLVYCA 286
           K + ++Q+CLN+ GLG D     R       + F+N   C+
Sbjct: 176 KPEKMVQKCLNDLGLGGDKYTPARVINRSMGKKFRNFYKCS 216


>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
           defective protein 8,isoform b protein.
          Length = 1431

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 164 KLKVLIQECLNENGLGEDAIEVIRAGEYREDEPFQNLVYCA 286
           K + ++Q+CLN+ GLG D     R       + F+N   C+
Sbjct: 176 KPEKMVQKCLNDLGLGGDKYTPARVINRSMGKKFRNFYKCS 216


>Z74036-3|CAA98488.1|  517|Caenorhabditis elegans Hypothetical
           protein F55C10.4 protein.
          Length = 517

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = +3

Query: 282 ALIKNSERSMKIIESSVKLQLRLSRKT*TWSLLSRAAEKK 401
           A++KN+ER     + + K  +R  R   TWS  SRAA+KK
Sbjct: 315 AIVKNAERLST--KDTGKSFVRPERFNSTWSHWSRAAQKK 352


>Z68882-11|CAA93104.1|  520|Caenorhabditis elegans Hypothetical
           protein C47E12.8 protein.
          Length = 520

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = +2

Query: 125 SRKLVSFAPEVAKKLKVLIQECLNENGLGEDAIEVIRAGEY--REDEPFQNLVYCA 286
           S  + S+ PE+AK+++++      E G+      +  AG +  R++E +Q ++ CA
Sbjct: 124 SMAITSWGPEIAKEMEIVTGA---EYGINSFKFFLAYAGVFMVRDEEFYQGMIQCA 176


>AB040993-1|BAB21561.1|  520|Caenorhabditis elegans CeCRMP/DHP-2
           protein.
          Length = 520

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = +2

Query: 125 SRKLVSFAPEVAKKLKVLIQECLNENGLGEDAIEVIRAGEY--REDEPFQNLVYCA 286
           S  + S+ PE+AK+++++      E G+      +  AG +  R++E +Q ++ CA
Sbjct: 124 SMAITSWGPEIAKEMEIVTGA---EYGINSFKFFLAYAGVFMVRDEEFYQGMIQCA 176


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,532,809
Number of Sequences: 27780
Number of extensions: 233897
Number of successful extensions: 657
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)