Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_O15
         (888 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   4.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   7.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.8  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = +2

Query: 125 KRPMSAYMLWLNSAREQIKSE 187
           K+P++A+ML++   R ++ +E
Sbjct: 480 KKPLNAFMLYMKEMRAKVVAE 500


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = +2

Query: 125 KRPMSAYMLWLNSAREQIKSE 187
           K+P++A+ML++   R ++ +E
Sbjct: 372 KKPLNAFMLYMKEMRAKVVAE 392


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 297 YCSLALAAFCSHSVLSFIDFQISPPFLAISVT 202
           YCSLA+   C   +       I+ P L I V+
Sbjct: 415 YCSLAIFVLCELLIEGTTSILINVPSLIIHVS 446


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 31  ILYALQFGCVPVQK 72
           +LY ++  CVP+QK
Sbjct: 59  VLYCMKCECVPLQK 72


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 97  PDGKNFEIIFELVHN 53
           P G NFEI FE  +N
Sbjct: 319 PAGSNFEIGFENYYN 333


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 17  IHFFTFSTLYSLVVYQFKNYFKIFAI 94
           + +FT   L+   +Y F + F IF I
Sbjct: 199 LDYFTLHLLFLPCIYYFYSAFIIFTI 224


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,820
Number of Sequences: 336
Number of extensions: 3504
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)