Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_O14
         (831 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067608-4|AAK95863.2|  473|Caenorhabditis elegans Hypothetical ...   171   5e-43
Z68302-8|CAA92632.2|  342|Caenorhabditis elegans Hypothetical pr...    48   8e-06
U53336-5|AAO21380.1|  271|Caenorhabditis elegans Hypothetical pr...    36   0.027
U53336-4|AAA96177.2|  290|Caenorhabditis elegans Hypothetical pr...    36   0.027
U50311-15|AAA92317.1|  281|Caenorhabditis elegans Hypothetical p...    32   0.58 
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr...    32   0.58 
Z68319-2|CAA92700.2|  446|Caenorhabditis elegans Hypothetical pr...    28   7.1  

>AF067608-4|AAK95863.2|  473|Caenorhabditis elegans Hypothetical
           protein B0511.13 protein.
          Length = 473

 Score =  171 bits (416), Expect = 5e-43
 Identities = 84/181 (46%), Positives = 107/181 (59%)
 Frame = +3

Query: 258 YCEYIIYFIVIAQCNWPVTNDTHKSIQSLKALMISDTHLLGPRRGHWLDKMRREWQMHQA 437
           Y EY I+FI  + C WP       S  S+KA MISDTHLLG   GHWLDK++REWQM+Q+
Sbjct: 20  YNEYFIFFIAFSSCQWPCKYG-RCSESSVKAFMISDTHLLGKINGHWLDKLKREWQMYQS 78

Query: 438 FQTIMMMLSPDVVFVLGDLFDEGEWTNNKEFQEYVERFYRLFMVPPHVNMYVVAGNHDIG 617
           F     + SPDV F LGDL DEG+W     F+ Y ERF +LF    +  +  +AGNHD+G
Sbjct: 79  FWISTWIHSPDVTFFLGDLMDEGKWAGRPVFEAYAERFKKLF--GDNEKVITLAGNHDLG 136

Query: 618 FHNYIRKGAIQRFYKLLNTSSVEFVTLKDIHFVLLNSMAMEGDSCXLCSEARNDILHISG 797
           FH  I    ++ F K      ++ + +K   FVL+NSMAM GD C LC EA   +  I  
Sbjct: 137 FHYAIMPETLEMFKKEFRRGLIDEMKIKKHRFVLINSMAMHGDGCRLCHEAELILEKIKS 196

Query: 798 R 800
           R
Sbjct: 197 R 197


>Z68302-8|CAA92632.2|  342|Caenorhabditis elegans Hypothetical
           protein ZK792.7 protein.
          Length = 342

 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
 Frame = +3

Query: 345 KALMISDTHLLGPRRGHWLDKMRREWQMHQA--FQTIMMMLSPDVVFVLGDLFDEGEWTN 518
           + L+++D  L+G +   + +  R +   + A  +        P  V  LGDLFDEG  +N
Sbjct: 49  RILIVADPQLIGYKNEKFGEISRWDSDRYLATGYSYAKWRFLPTTVMFLGDLFDEGIESN 108

Query: 519 NKEFQEYVERFYRLFMVPPHVNMYVVAGNHDIG 617
           + E+ E  ERF  ++ +    N   +AG++DIG
Sbjct: 109 DDEWYETYERFIGIYPIDRGDNAIYIAGDNDIG 141


>U53336-5|AAO21380.1|  271|Caenorhabditis elegans Hypothetical
           protein K07C11.7b protein.
          Length = 271

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +3

Query: 486 GD-LFDEGEWTNNKEFQEYVERFYRLFMVPPHVNMYVVAGNHDIGFHNYIRKGAIQRFYK 662
           GD L   G++TNN + +E + +F       PH    VVAGNH++GF +   +G  Q   K
Sbjct: 68  GDVLIHAGDFTNNGKREELI-KFNEEMTRFPHKYKLVVAGNHELGFDHDENQGERQDADK 126

Query: 663 LLNT 674
            L T
Sbjct: 127 GLGT 130


>U53336-4|AAA96177.2|  290|Caenorhabditis elegans Hypothetical
           protein K07C11.7a protein.
          Length = 290

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +3

Query: 486 GD-LFDEGEWTNNKEFQEYVERFYRLFMVPPHVNMYVVAGNHDIGFHNYIRKGAIQRFYK 662
           GD L   G++TNN + +E + +F       PH    VVAGNH++GF +   +G  Q   K
Sbjct: 87  GDVLIHAGDFTNNGKREELI-KFNEEMTRFPHKYKLVVAGNHELGFDHDENQGERQDADK 145

Query: 663 LLNT 674
            L T
Sbjct: 146 GLGT 149


>U50311-15|AAA92317.1|  281|Caenorhabditis elegans Hypothetical
           protein C25E10.12 protein.
          Length = 281

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +3

Query: 486 GD-LFDEGEWTNNKEFQEYVERFYRLFMVPPHVNMYVVAGNHDIGFHN 626
           GD L   G++TN  +  E + +F       PH +  V+AGNH++GF +
Sbjct: 68  GDVLIHSGDFTNCGDIGEVI-KFNAEIGSLPHKHKIVIAGNHELGFED 114


>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
            M03A8.2 protein.
          Length = 2275

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = +3

Query: 501  EGEWTNNKEFQEYVER---FYRLFMVPPHVNMYV 593
            E E   NKE QE VER   F++ F+  P VN+YV
Sbjct: 1981 EEEEERNKEIQEAVERGETFFKQFVFSPSVNIYV 2014


>Z68319-2|CAA92700.2|  446|Caenorhabditis elegans Hypothetical
           protein T23G7.2a protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
 Frame = +3

Query: 468 DVVFVLGDLFDEGEWTNNKEFQEYVERFYRLFMVPPHVNMYVVAGNHDIGFHNYIRKGAI 647
           D + ++GD+ D           E  +R   +  +P H   Y V GNH+  ++  +++   
Sbjct: 248 DAILIVGDMVDA-------PVAEIEDRVRPILQLPAHAPTYFVTGNHEY-YYGDVQEWI- 298

Query: 648 QRFYK--LLNTSSVEFVTLKDIHFVLLNSMA 734
            RFYK   +N    E   LK +    +N ++
Sbjct: 299 -RFYKNGRINVLENESTMLKGVCLAGVNDIS 328


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,341,313
Number of Sequences: 27780
Number of extensions: 375953
Number of successful extensions: 901
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)