Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_O12
(827 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L37936-1|AAC37577.1| 294|Homo sapiens elongation factor Ts prot... 171 2e-42
AF110399-1|AAD20224.1| 325|Homo sapiens elongation factor Ts pr... 168 2e-41
BC093068-1|AAH93068.1| 325|Homo sapiens TSFM protein protein. 166 1e-40
BC022862-1|AAH22862.1| 346|Homo sapiens Ts translation elongati... 153 7e-37
Y18880-1|CAB56154.1| 715|Homo sapiens midline 2 protein protein. 31 5.1
BT006663-1|AAP35309.1| 685|Homo sapiens midline 2 protein. 31 5.1
BC017707-1|AAH17707.1| 685|Homo sapiens midline 2 protein. 31 5.1
AY625004-1|AAT48105.1| 685|Homo sapiens TRIM1 beta protein. 31 5.1
AL109946-4|CAO72054.1| 685|Homo sapiens midline 2 protein. 31 5.1
AL109946-3|CAO72053.1| 715|Homo sapiens midline 2 protein. 31 5.1
AL034399-3|CAI42074.1| 685|Homo sapiens midline 2 protein. 31 5.1
AL034399-2|CAI42073.1| 715|Homo sapiens midline 2 protein. 31 5.1
AF196481-1|AAF07341.1| 685|Homo sapiens RING finger protein pro... 31 5.1
AK131308-1|BAD18474.1| 891|Homo sapiens protein ( Homo sapiens ... 30 8.9
>L37936-1|AAC37577.1| 294|Homo sapiens elongation factor Ts
protein.
Length = 294
Score = 171 bits (417), Expect = 2e-42
Identities = 96/243 (39%), Positives = 137/243 (56%), Gaps = 9/243 (3%)
Frame = +3
Query: 120 RIHTSPAYKAAESS--LLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWA 293
R++ P A+ SS LL KLR+KTGY+ NCKKALE D +AE WLH++AQ GW+
Sbjct: 2 RVYAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWS 61
Query: 294 KATKLAGRTALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTK 473
KA KL GR +GL+ + + N LVE+NCETDFV++N KFQ +++ A+ + T
Sbjct: 62 KAAKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTL 121
Query: 474 LQAKGPITKMELDSEQLGTLHAEGGKK--LSEILALFIGSVGENAVLRRAECWKANSEDV 647
+K L+S +L L A ++ L + LAL IG +GEN +L+RA W
Sbjct: 122 KDQPSAYSKGFLNSSELSGLPAGPDREGSLKDQLALAIGKLGENMILKRA-AWVKVPSGF 180
Query: 648 KIAGYTHPA--PXXXXXXXXGKYGALL---AYKQPNDVXDIGRQLCQHIVGCAPTKIGDK 812
+ Y H A GKYGAL+ +Q ++ D+GR+L QH+VG AP +G
Sbjct: 181 YVGSYVHGAMQSPSLHKLVLGKYGALVICETSEQKTNLEDVGRRLGQHVVGMAPLSVGSL 240
Query: 813 EKD 821
+ +
Sbjct: 241 DDE 243
>AF110399-1|AAD20224.1| 325|Homo sapiens elongation factor Ts
protein.
Length = 325
Score = 168 bits (409), Expect = 2e-41
Identities = 95/241 (39%), Positives = 135/241 (56%), Gaps = 9/241 (3%)
Frame = +3
Query: 126 HTSPAYKAAESS--LLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKA 299
+ P A+ SS LL KLR+KTGY+ NCKKALE D +AE WLH++AQ GW+KA
Sbjct: 35 YAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKA 94
Query: 300 TKLAGRTALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQ 479
KL GR +GL+ + + N LVE+NCETDFV++N KFQ +++ A+ + T
Sbjct: 95 AKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKD 154
Query: 480 AKGPITKMELDSEQLGTLHAEGGKK--LSEILALFIGSVGENAVLRRAECWKANSEDVKI 653
+K L+S +L L A ++ L + LAL IG +GEN +L+RA W +
Sbjct: 155 QPSAYSKGFLNSSELSGLPAGPDREGSLKDQLALAIGKLGENMILKRA-AWVKVPSGFYV 213
Query: 654 AGYTHPA--PXXXXXXXXGKYGALL---AYKQPNDVXDIGRQLCQHIVGCAPTKIGDKEK 818
Y H A GKYGAL+ +Q ++ D+GR+L QH+VG AP +G +
Sbjct: 214 GSYVHGAMQSPSLHKLVLGKYGALVICETSEQKTNLEDVGRRLGQHVVGMAPLSVGSLDD 273
Query: 819 D 821
+
Sbjct: 274 E 274
>BC093068-1|AAH93068.1| 325|Homo sapiens TSFM protein protein.
Length = 325
Score = 166 bits (403), Expect = 1e-40
Identities = 94/241 (39%), Positives = 134/241 (55%), Gaps = 9/241 (3%)
Frame = +3
Query: 126 HTSPAYKAAESS--LLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKA 299
+ P A+ SS LL KLR+KTGY+ NCKKALE D +AE WLH++AQ GW+KA
Sbjct: 35 YAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKA 94
Query: 300 TKLAGRTALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQ 479
KL GR +GL+ + + N LVE+NCETDFV++N KFQ +++ A+ + T
Sbjct: 95 AKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKD 154
Query: 480 AKGPITKMELDSEQLGTLHAEGGKK--LSEILALFIGSVGENAVLRRAECWKANSEDVKI 653
+K L+S +L L A ++ L + LAL IG +GE +L+RA W +
Sbjct: 155 QPSAYSKGFLNSSELSGLPAGPDREGSLKDQLALAIGKLGETMILKRA-AWVKVPSGFYV 213
Query: 654 AGYTHPA--PXXXXXXXXGKYGALL---AYKQPNDVXDIGRQLCQHIVGCAPTKIGDKEK 818
Y H A GKYGAL+ +Q ++ D+GR+L QH+VG AP +G +
Sbjct: 214 GSYVHGAMQSPSLHKLVLGKYGALVICETSEQKTNLEDVGRRLGQHVVGMAPLSVGSLDD 273
Query: 819 D 821
+
Sbjct: 274 E 274
>BC022862-1|AAH22862.1| 346|Homo sapiens Ts translation elongation
factor, mitochondrial protein.
Length = 346
Score = 153 bits (371), Expect = 7e-37
Identities = 98/262 (37%), Positives = 142/262 (54%), Gaps = 30/262 (11%)
Frame = +3
Query: 126 HTSPAYKAAESS--LLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKA 299
+ P A+ SS LL KLR+KTGY+ NCKKALE D +AE WLH++AQ GW+KA
Sbjct: 35 YAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKA 94
Query: 300 TKLAGRTALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKF------ 461
KL GR +GL+ + + N LVE+NCETDFV++N KFQ +++ A+ +
Sbjct: 95 AKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKD 154
Query: 462 ---AHTKLQAKGPIT----------KME--LDSEQLGTLHAEGGKK--LSEILALFIGSV 590
A++K+Q P+ +E L+S +L L A ++ L + LAL IG +
Sbjct: 155 QPSAYSKVQWLTPVNLALWEAEAGGSLEGFLNSSELSGLPAGPDREGSLKDQLALAIGKL 214
Query: 591 GENAVLRRAECWKANSEDVKIAGYTHPA--PXXXXXXXXGKYGALL---AYKQPNDVXDI 755
GEN +L+RA W + Y H A GKYGAL+ +Q ++ D+
Sbjct: 215 GENMILKRA-AWVKVPSGFYVGSYVHGAMQSPSLHKLVLGKYGALVICETSEQKTNLEDV 273
Query: 756 GRQLCQHIVGCAPTKIGDKEKD 821
GR+L QH+VG AP +G + +
Sbjct: 274 GRRLGQHVVGMAPLSVGSLDDE 295
>Y18880-1|CAB56154.1| 715|Homo sapiens midline 2 protein protein.
Length = 715
Score = 31.1 bits (67), Expect = 5.1
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>BT006663-1|AAP35309.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 31.1 bits (67), Expect = 5.1
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>BC017707-1|AAH17707.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 31.1 bits (67), Expect = 5.1
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AY625004-1|AAT48105.1| 685|Homo sapiens TRIM1 beta protein.
Length = 685
Score = 31.1 bits (67), Expect = 5.1
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AL109946-4|CAO72054.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 31.1 bits (67), Expect = 5.1
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AL109946-3|CAO72053.1| 715|Homo sapiens midline 2 protein.
Length = 715
Score = 31.1 bits (67), Expect = 5.1
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AL034399-3|CAI42074.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 31.1 bits (67), Expect = 5.1
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AL034399-2|CAI42073.1| 715|Homo sapiens midline 2 protein.
Length = 715
Score = 31.1 bits (67), Expect = 5.1
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AF196481-1|AAF07341.1| 685|Homo sapiens RING finger protein
protein.
Length = 685
Score = 31.1 bits (67), Expect = 5.1
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 102 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 281
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 282 MGWAKATKLAGRTAL 326
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AK131308-1|BAD18474.1| 891|Homo sapiens protein ( Homo sapiens
cDNA FLJ16287 fis, clone OCBBF2008144, moderately
similar to Zinc finger protein 91. ).
Length = 891
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -1
Query: 197 CVARFFPEFSKQRRFSCFIRWTCMNSSNQLENHKNTLHSSKSFLC 63
C+AR + Q+ + C + N S L NHK K F C
Sbjct: 596 CLARHLRIHTGQKPYKCNVCGKVFNDSGNLSNHKRIHTGEKPFQC 640
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,281,315
Number of Sequences: 237096
Number of extensions: 2818672
Number of successful extensions: 6125
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6117
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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