Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_O12
         (827 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051938-1|AAK93362.1|  318|Drosophila melanogaster LD41866p pro...   233   3e-61
AE014134-2862|AAF53625.1|  318|Drosophila melanogaster CG6412-PA...   233   3e-61
M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein ( D.me...    29   7.8  
BT023889-1|ABA81823.1| 1557|Drosophila melanogaster RE03775p pro...    29   7.8  
BT001685-1|AAN71440.1| 1017|Drosophila melanogaster RE58116p pro...    29   7.8  
AY122093-1|AAM52605.1|  607|Drosophila melanogaster GH04589p pro...    29   7.8  
AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA ...    29   7.8  
AE014134-3148|AAF53836.1|  578|Drosophila melanogaster CG10366-P...    29   7.8  

>AY051938-1|AAK93362.1|  318|Drosophila melanogaster LD41866p
           protein.
          Length = 318

 Score =  233 bits (569), Expect = 3e-61
 Identities = 115/231 (49%), Positives = 149/231 (64%), Gaps = 6/231 (2%)
 Frame = +3

Query: 153 ESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKATKLAGRTALQG 332
           E S LA LRKKTGYT ANCKKALE HNND   AE WLHEQAQ +GW+KATK+A R    G
Sbjct: 28  EKSALAALRKKTGYTFANCKKALEKHNNDVGLAEKWLHEQAQTLGWSKATKVADRATAHG 87

Query: 333 LVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITKMELD 512
           L+ V    N GA+VELNCETDFVA+ND F++ ++  A    ++        G + K+  D
Sbjct: 88  LIGVLIRGNRGAMVELNCETDFVARNDTFKRFVDHVACMCLQYTDL-TDFDGDLWKLGFD 146

Query: 513 SEQLGTLHAEGGKKLSEILALFIGSVGENAVLRRAECWKANSEDVKIAGYTHPAP----X 680
           ++ L  L  E G+ L + LAL IG++GENA +RRA C+KAN+ D+K+ GY HPAP     
Sbjct: 147 ADALRNLRTEEGRTLGDHLALLIGAIGENATIRRALCFKANN-DLKLVGYAHPAPTNVGT 205

Query: 681 XXXXXXXGKYGALLAYKQPNDVXD--IGRQLCQHIVGCAPTKIGDKEKDXP 827
                  GKYGA++AY+  + + D    + +CQ IVG  PTKIG+ +KD P
Sbjct: 206 TEGITQVGKYGAIVAYRSTHPLLDFEFHKSICQQIVGMKPTKIGEYDKDKP 256


>AE014134-2862|AAF53625.1|  318|Drosophila melanogaster CG6412-PA
           protein.
          Length = 318

 Score =  233 bits (569), Expect = 3e-61
 Identities = 115/231 (49%), Positives = 149/231 (64%), Gaps = 6/231 (2%)
 Frame = +3

Query: 153 ESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKATKLAGRTALQG 332
           E S LA LRKKTGYT ANCKKALE HNND   AE WLHEQAQ +GW+KATK+A R    G
Sbjct: 28  EKSALAALRKKTGYTFANCKKALEKHNNDVGLAEKWLHEQAQTLGWSKATKVADRATAHG 87

Query: 333 LVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITKMELD 512
           L+ V    N GA+VELNCETDFVA+ND F++ ++  A    ++        G + K+  D
Sbjct: 88  LIGVLIRGNRGAMVELNCETDFVARNDTFKRFVDHVACMCLQYTDL-TDFDGDLWKLGFD 146

Query: 513 SEQLGTLHAEGGKKLSEILALFIGSVGENAVLRRAECWKANSEDVKIAGYTHPAP----X 680
           ++ L  L  E G+ L + LAL IG++GENA +RRA C+KAN+ D+K+ GY HPAP     
Sbjct: 147 ADALRNLRTEEGRTLGDHLALLIGAIGENATIRRALCFKANN-DLKLVGYAHPAPTNVGT 205

Query: 681 XXXXXXXGKYGALLAYKQPNDVXD--IGRQLCQHIVGCAPTKIGDKEKDXP 827
                  GKYGA++AY+  + + D    + +CQ IVG  PTKIG+ +KD P
Sbjct: 206 TEGITQVGKYGAIVAYRSTHPLLDFEFHKSICQQIVGMKPTKIGEYDKDKP 256


>M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein (
           D.melanogaster alpha-spectrin mRNA, complete cds. ).
          Length = 2415

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
 Frame = +3

Query: 213 KALEMHNNDADKAETWLHEQAQAMGWAKATKLAGRTALQGLVAVKFDKNHGALVELNCET 392
           +  +    DAD+ E+W+HE+ QA   A        T LQ     K  K+     E++  +
Sbjct: 47  RRFQYFKRDADELESWIHEKLQA---ASEESYRDPTNLQ----AKIQKHQAFEAEVSAHS 99

Query: 393 DFVAKNDKF-QKMIEDAAIASFKFAHTKLQAKGPITKMELDSEQLGTLHAEGGKKLSEIL 569
           + +   D   Q+MI         FA   +Q +  + ++    E L +  AE G KL + L
Sbjct: 100 NAIVSLDNTGQEMINQQ-----HFASESIQVR--LDELHKLWELLLSRLAEKGLKLQQAL 152

Query: 570 AL 575
            L
Sbjct: 153 VL 154


>BT023889-1|ABA81823.1| 1557|Drosophila melanogaster RE03775p
           protein.
          Length = 1557

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
 Frame = +3

Query: 213 KALEMHNNDADKAETWLHEQAQAMGWAKATKLAGRTALQGLVAVKFDKNHGALVELNCET 392
           +  +    DAD+ E+W+HE+ QA   A        T LQ     K  K+     E++  +
Sbjct: 47  RRFQYFKRDADELESWIHEKLQA---ASEESYRDPTNLQ----AKIQKHQAFEAEVSAHS 99

Query: 393 DFVAKNDKF-QKMIEDAAIASFKFAHTKLQAKGPITKMELDSEQLGTLHAEGGKKLSEIL 569
           + +   D   Q+MI         FA   +Q +  + ++    E L +  AE G KL + L
Sbjct: 100 NAIVSLDNTGQEMINQQ-----HFASESIQVR--LDELHKLWELLLSRLAEKGLKLQQAL 152

Query: 570 AL 575
            L
Sbjct: 153 VL 154


>BT001685-1|AAN71440.1| 1017|Drosophila melanogaster RE58116p
           protein.
          Length = 1017

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +3

Query: 129 TSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAM 284
           TSP    + S +   ++KK+  TIA  +KAL   + +AD     L  +A+++
Sbjct: 718 TSPLSNRSNSLIFGSIKKKSTLTIAESEKALLKADLEADMKYKQLIMEAESL 769


>AY122093-1|AAM52605.1|  607|Drosophila melanogaster GH04589p
           protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 155 FSCFIRWTCMNSSNQLENHKNTLHSSKSFLC 63
           F C +   C  S+N+L++HK T H    ++C
Sbjct: 392 FECEVCKKCFKSANRLKHHKET-HDPHKYIC 421


>AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA
           protein.
          Length = 2415

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
 Frame = +3

Query: 213 KALEMHNNDADKAETWLHEQAQAMGWAKATKLAGRTALQGLVAVKFDKNHGALVELNCET 392
           +  +    DAD+ E+W+HE+ QA   A        T LQ     K  K+     E++  +
Sbjct: 47  RRFQYFKRDADELESWIHEKLQA---ASEESYRDPTNLQ----AKIQKHQAFEAEVSAHS 99

Query: 393 DFVAKNDKF-QKMIEDAAIASFKFAHTKLQAKGPITKMELDSEQLGTLHAEGGKKLSEIL 569
           + +   D   Q+MI         FA   +Q +  + ++    E L +  AE G KL + L
Sbjct: 100 NAIVSLDNTGQEMINQQ-----HFASESIQVR--LDELHKLWELLLSRLAEKGLKLQQAL 152

Query: 570 AL 575
            L
Sbjct: 153 VL 154


>AE014134-3148|AAF53836.1|  578|Drosophila melanogaster CG10366-PA
           protein.
          Length = 578

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 155 FSCFIRWTCMNSSNQLENHKNTLHSSKSFLC 63
           F C +   C  S+N+L++HK T H    ++C
Sbjct: 363 FECEVCKKCFKSANRLKHHKET-HDPHKYIC 392


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,788,225
Number of Sequences: 53049
Number of extensions: 836346
Number of successful extensions: 2298
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2290
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)