Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_O11
(460 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 79 3e-17
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 79 3e-17
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 79 3e-17
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 55 4e-10
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 7.3
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 20 9.6
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 78.6 bits (185), Expect = 3e-17
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 15 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 125
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 40 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 78.6 bits (185), Expect = 3e-17
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 15 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 125
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 40 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 78.6 bits (185), Expect = 3e-17
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 15 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 125
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 116 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 78.6 bits (185), Expect = 3e-17
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 15 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 125
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 78.6 bits (185), Expect = 3e-17
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 15 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 125
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 268 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 78.6 bits (185), Expect = 3e-17
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 15 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 125
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 344 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 78.6 bits (185), Expect = 3e-17
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 15 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 125
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 496 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 78.6 bits (185), Expect = 3e-17
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 15 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 125
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 572 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 78.6 bits (185), Expect = 3e-17
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 15 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 125
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 648 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 76.2 bits (179), Expect = 1e-16
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +3
Query: 15 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 125
QQR IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 420 QQRSIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 78.6 bits (185), Expect = 3e-17
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 15 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 125
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 12 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 48
Score = 52.4 bits (120), Expect = 2e-09
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +3
Query: 15 QQRLIFAGKQLEDGRTLSDYNIQKE 89
QQR IFAGKQLEDGRTLSDYNIQKE
Sbjct: 88 QQRSIFAGKQLEDGRTLSDYNIQKE 112
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 54.8 bits (126), Expect = 4e-10
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +3
Query: 15 QQRLIFAGKQLEDGRTLSDYNIQKE 89
QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 40 QQRLIFAGKQLEDGRTLSDYNIQKE 64
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 20.6 bits (41), Expect = 7.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 5 RPITTTSHLCRETIRRWP 58
RP TTTS R T WP
Sbjct: 1064 RP-TTTSTTTRPTTTNWP 1080
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 20.2 bits (40), Expect = 9.6
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +1
Query: 76 TSRKNPHFTWF*DLEEVQLNLPFAFSP*SITVRK 177
T K+ + + DL+ ++L F F IT+++
Sbjct: 153 TRTKDKYRVVYTDLQRIELEKEFTFVSKYITIKR 186
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,694
Number of Sequences: 336
Number of extensions: 1894
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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