Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_O10
         (621 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010270-1|AAQ23588.1| 1260|Drosophila melanogaster RE21134p pro...    30   2.9  
AE014296-3143|AAO41234.1| 1156|Drosophila melanogaster CG32206-P...    30   2.9  
AE014296-3142|AAF49168.3| 1260|Drosophila melanogaster CG32206-P...    30   2.9  

>BT010270-1|AAQ23588.1| 1260|Drosophila melanogaster RE21134p protein.
          Length = 1260

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -2

Query: 611  GMSEHWSAITCVSS--GITSVGDNGSGAIRSVGDHGGGYVTNQLLGE 477
            GM    S+ +   S  GI  +G +GSG+  + G   GG   N+ L E
Sbjct: 1071 GMGSQTSSQSAAGSNTGIGGLGTSGSGSAANAGGSAGGATANETLNE 1117


>AE014296-3143|AAO41234.1| 1156|Drosophila melanogaster CG32206-PC,
            isoform C protein.
          Length = 1156

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -2

Query: 611  GMSEHWSAITCVSS--GITSVGDNGSGAIRSVGDHGGGYVTNQLLGE 477
            GM    S+ +   S  GI  +G +GSG+  + G   GG   N+ L E
Sbjct: 1071 GMGSQTSSQSAAGSNTGIGGLGTSGSGSAANAGGSAGGATANETLNE 1117


>AE014296-3142|AAF49168.3| 1260|Drosophila melanogaster CG32206-PB,
            isoform B protein.
          Length = 1260

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -2

Query: 611  GMSEHWSAITCVSS--GITSVGDNGSGAIRSVGDHGGGYVTNQLLGE 477
            GM    S+ +   S  GI  +G +GSG+  + G   GG   N+ L E
Sbjct: 1071 GMGSQTSSQSAAGSNTGIGGLGTSGSGSAANAGGSAGGATANETLNE 1117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,780,126
Number of Sequences: 53049
Number of extensions: 110179
Number of successful extensions: 772
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)