Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_O04
(659 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D42045-1|BAA07646.2| 1044|Homo sapiens KIAA0086 protein. 31 2.8
DQ871600-1|ABI49507.1| 496|Homo sapiens DCLRE1A protein. 31 2.8
BC062582-1|AAH62582.1| 1040|Homo sapiens DNA cross-link repair 1... 31 2.8
BC013124-1|AAH13124.1| 1040|Homo sapiens DNA cross-link repair 1... 31 2.8
AY607842-1|AAT09762.1| 1040|Homo sapiens DNA cross-link repair 1... 31 2.8
AL592546-2|CAI12637.1| 1040|Homo sapiens DNA cross-link repair 1... 31 2.8
AK074170-1|BAB84996.1| 503|Homo sapiens FLJ00243 protein protein. 31 3.6
M99063-1|AAA35746.1| 638|Homo sapiens cytokeratin 2 protein. 30 6.4
BC109235-1|AAI09236.1| 665|Homo sapiens dual specificity phosph... 30 6.4
BC109234-1|AAI09235.1| 665|Homo sapiens dual specificity phosph... 30 6.4
BC042101-1|AAH42101.1| 662|Homo sapiens DUSP16 protein protein. 30 6.4
AY038927-1|AAK69770.1| 143|Homo sapiens truncated MAPK phosphat... 30 6.4
AK055973-1|BAB71060.1| 665|Homo sapiens protein ( Homo sapiens ... 30 6.4
AJ564103-1|CAD91891.1| 638|Homo sapiens keratin 2p protein. 30 6.4
AF506796-1|AAN75120.1| 665|Homo sapiens dual specificity phosph... 30 6.4
AB052156-1|BAB40814.1| 665|Homo sapiens MAPK phosphatase-7 prot... 30 6.4
AB051487-1|BAB21791.1| 690|Homo sapiens KIAA1700 protein protein. 30 6.4
BC004242-1|AAH04242.1| 122|Homo sapiens heterogeneous nuclear r... 30 8.4
AB051552-1|BAB21856.1| 608|Homo sapiens KIAA1765 protein protein. 30 8.4
>D42045-1|BAA07646.2| 1044|Homo sapiens KIAA0086 protein.
Length = 1044
Score = 31.5 bits (68), Expect = 2.8
Identities = 23/69 (33%), Positives = 29/69 (42%)
Frame = +2
Query: 260 ELKSHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAEFWEELKAKYDPTNEFTKKYETE 439
EL S + + C K Q+G +K HLIN E+E K K FTK
Sbjct: 629 ELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTESEAVNLSKVKV-----FTKSAHGG 683
Query: 440 LKRVTA*IP 466
L+R IP
Sbjct: 684 LQRGNKKIP 692
>DQ871600-1|ABI49507.1| 496|Homo sapiens DCLRE1A protein.
Length = 496
Score = 31.5 bits (68), Expect = 2.8
Identities = 23/69 (33%), Positives = 29/69 (42%)
Frame = +2
Query: 260 ELKSHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAEFWEELKAKYDPTNEFTKKYETE 439
EL S + + C K Q+G +K HLIN E+E K K FTK
Sbjct: 433 ELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTESEAVNLSKVKV-----FTKSAHGG 487
Query: 440 LKRVTA*IP 466
L+R IP
Sbjct: 488 LQRGNKKIP 496
>BC062582-1|AAH62582.1| 1040|Homo sapiens DNA cross-link repair 1A
(PSO2 homolog, S. cerevisiae) protein.
Length = 1040
Score = 31.5 bits (68), Expect = 2.8
Identities = 23/69 (33%), Positives = 29/69 (42%)
Frame = +2
Query: 260 ELKSHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAEFWEELKAKYDPTNEFTKKYETE 439
EL S + + C K Q+G +K HLIN E+E K K FTK
Sbjct: 625 ELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTESEAVNLSKVKV-----FTKSAHGG 679
Query: 440 LKRVTA*IP 466
L+R IP
Sbjct: 680 LQRGNKKIP 688
>BC013124-1|AAH13124.1| 1040|Homo sapiens DNA cross-link repair 1A
(PSO2 homolog, S. cerevisiae) protein.
Length = 1040
Score = 31.5 bits (68), Expect = 2.8
Identities = 23/69 (33%), Positives = 29/69 (42%)
Frame = +2
Query: 260 ELKSHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAEFWEELKAKYDPTNEFTKKYETE 439
EL S + + C K Q+G +K HLIN E+E K K FTK
Sbjct: 625 ELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTESEAVNLSKVKV-----FTKSAHGG 679
Query: 440 LKRVTA*IP 466
L+R IP
Sbjct: 680 LQRGNKKIP 688
>AY607842-1|AAT09762.1| 1040|Homo sapiens DNA cross-link repair 1A
(PSO2 homolog, S. cerevisiae) protein.
Length = 1040
Score = 31.5 bits (68), Expect = 2.8
Identities = 23/69 (33%), Positives = 29/69 (42%)
Frame = +2
Query: 260 ELKSHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAEFWEELKAKYDPTNEFTKKYETE 439
EL S + + C K Q+G +K HLIN E+E K K FTK
Sbjct: 625 ELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTESEAVNLSKVKV-----FTKSAHGG 679
Query: 440 LKRVTA*IP 466
L+R IP
Sbjct: 680 LQRGNKKIP 688
>AL592546-2|CAI12637.1| 1040|Homo sapiens DNA cross-link repair 1A
(PSO2 homolog, S. cerevisiae) protein.
Length = 1040
Score = 31.5 bits (68), Expect = 2.8
Identities = 23/69 (33%), Positives = 29/69 (42%)
Frame = +2
Query: 260 ELKSHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAEFWEELKAKYDPTNEFTKKYETE 439
EL S + + C K Q+G +K HLIN E+E K K FTK
Sbjct: 625 ELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTESEAVNLSKVKV-----FTKSAHGG 679
Query: 440 LKRVTA*IP 466
L+R IP
Sbjct: 680 LQRGNKKIP 688
>AK074170-1|BAB84996.1| 503|Homo sapiens FLJ00243 protein protein.
Length = 503
Score = 31.1 bits (67), Expect = 3.6
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 3/133 (2%)
Frame = +3
Query: 99 LPACLDGCGPRSPXNSTQTNTTLSIWTSSYLTVGSSFPTYIASSKRANVPQKARNLNLTS 278
+PA + G RS + + SI + TV SS + N +L L S
Sbjct: 194 IPAAMTHLGIRSSSGLQSSRSNPSIQATLNKTVLSSSLNNHPQTSVPNASALHPSLRLFS 253
Query: 279 -RKPSRPTA-LNAPKRKRVEPKR*LVTSSTTKPNSGRS*R-PNTIPPTSSQRNMKLNSNA 449
PS T L+ P R+R P L S + N G S + +T P + ++S+
Sbjct: 254 LSNPSLSTTNLSGPSRRRQPPVSPLTLSPGPEANQGFSRQLSSTSPLAPYPTSQMVSSDR 313
Query: 450 LQLKFL*KRLTAQ 488
QL FL AQ
Sbjct: 314 SQLSFLPTEAQAQ 326
>M99063-1|AAA35746.1| 638|Homo sapiens cytokeratin 2 protein.
Length = 638
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 338 KMIGHLINHEAEFWEELKAKYDPTNEFTKKYETELKRVTA 457
K + L+ ELK+ D +F KKYE E+ + TA
Sbjct: 243 KQLDSLLGERGNLEGELKSMQDLVEDFKKKYEDEINKRTA 282
>BC109235-1|AAI09236.1| 665|Homo sapiens dual specificity
phosphatase 16 protein.
Length = 665
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 269 SHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAE 373
SHI EA+ NC+K K + + +I LI H A+
Sbjct: 40 SHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74
>BC109234-1|AAI09235.1| 665|Homo sapiens dual specificity
phosphatase 16 protein.
Length = 665
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 269 SHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAE 373
SHI EA+ NC+K K + + +I LI H A+
Sbjct: 40 SHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74
>BC042101-1|AAH42101.1| 662|Homo sapiens DUSP16 protein protein.
Length = 662
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 269 SHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAE 373
SHI EA+ NC+K K + + +I LI H A+
Sbjct: 40 SHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74
>AY038927-1|AAK69770.1| 143|Homo sapiens truncated MAPK phosphatase
7 protein.
Length = 143
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 269 SHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAE 373
SHI EA+ NC+K K + + +I LI H A+
Sbjct: 40 SHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74
>AK055973-1|BAB71060.1| 665|Homo sapiens protein ( Homo sapiens
cDNA FLJ31411 fis, clone NT2NE2000214, moderately
similar to DUAL SPECIFICITY PROTEIN PHOSPHATASE 8 (EC
3.1.3.48). ).
Length = 665
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 269 SHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAE 373
SHI EA+ NC+K K + + +I LI H A+
Sbjct: 40 SHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74
>AJ564103-1|CAD91891.1| 638|Homo sapiens keratin 2p protein.
Length = 638
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 338 KMIGHLINHEAEFWEELKAKYDPTNEFTKKYETELKRVTA 457
K + L+ ELK+ D +F KKYE E+ + TA
Sbjct: 243 KQLDSLLGERGNLEGELKSMQDLVEDFKKKYEDEINKRTA 282
>AF506796-1|AAN75120.1| 665|Homo sapiens dual specificity
phosphatase 16 protein.
Length = 665
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 269 SHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAE 373
SHI EA+ NC+K K + + +I LI H A+
Sbjct: 40 SHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74
>AB052156-1|BAB40814.1| 665|Homo sapiens MAPK phosphatase-7
protein.
Length = 665
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 269 SHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAE 373
SHI EA+ NC+K K + + +I LI H A+
Sbjct: 40 SHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74
>AB051487-1|BAB21791.1| 690|Homo sapiens KIAA1700 protein protein.
Length = 690
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 269 SHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAE 373
SHI EA+ NC+K K + + +I LI H A+
Sbjct: 65 SHILEAININCSKLMKRRLQQDKVLITELIQHSAK 99
>BC004242-1|AAH04242.1| 122|Homo sapiens heterogeneous nuclear
ribonucleoprotein U-like 1 protein.
Length = 122
Score = 29.9 bits (64), Expect = 8.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 123 GPRSPXNSTQTNTTLSIWTSSYLTVGSSFPTYIASSKRANVP 248
G SP ST T T L +W L G +PT A+ R ++P
Sbjct: 79 GLHSPTASTSTTTCLQLWELRRLQPGPLYPT--ATPHRTDLP 118
>AB051552-1|BAB21856.1| 608|Homo sapiens KIAA1765 protein protein.
Length = 608
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 271 SHQGSPRDQLR*MHQSAKGWNRKDDWSPHQPRSRILGGAEGQ 396
SH+ SPR+ + + + +K ++K+D P S G A+ +
Sbjct: 162 SHRSSPRNPTQELRRPSKSMDKKEDRGPEDQESHAQGAAKAK 203
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,484,176
Number of Sequences: 237096
Number of extensions: 2067119
Number of successful extensions: 4607
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4607
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -