Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_O03
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 65 4e-11
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin fam... 43 2e-04
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 40 0.002
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein. 37 0.016
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 36 0.037
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 33 0.20
U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical pr... 32 0.35
AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical ... 31 0.60
Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 30 1.4
Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical ... 28 5.6
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 28 7.4
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 28 7.4
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 9.8
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 27 9.8
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 27 9.8
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/116 (27%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Frame = +3
Query: 276 PWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKE 455
P + +V+G++ ++ FLGCCGAIRE++C+ V++A + +S +
Sbjct: 53 PILLLVIGSLCTLLGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRL 112
Query: 456 SIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINYGQF-TLPESCCV 620
I + + + ++ E+A + + + FECCG T + ++ F T+P+SCC+
Sbjct: 113 GIGNQLQTGMVRYHESRGVESA---WDKTHQLFECCGVTNSSDWLTFTTIPDSCCI 165
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 2/114 (1%)
Frame = +3
Query: 279 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKES 458
+I IV+GAVM V+A LGCCG S ++ Y+ + +
Sbjct: 115 YIIIVLGAVMMVVAMLGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKDGLDVE 174
Query: 459 IMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINYGQF--TLPESC 614
+ D + + + + LQ F CCGN G ++ F +P SC
Sbjct: 175 LSDALNYMVQHYYQGPG--VVQESLDHLQTAFRCCGNAGCSDFRVFRQDIPRSC 226
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/96 (21%), Positives = 40/96 (41%)
Frame = +3
Query: 279 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKES 458
W + GA++ ++ + GC GA + + C + + F E IK
Sbjct: 58 WFLVGAGAIIILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHY 117
Query: 459 IMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 566
+ + + R +++ A + F +Q +FECCG
Sbjct: 118 VESSMYDTIRNR--YSSETAFKDAFDTVQEKFECCG 151
>U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin family
protein 9 protein.
Length = 233
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/98 (28%), Positives = 39/98 (39%)
Frame = +3
Query: 279 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKES 458
WI + VGA++F++ F GCCGA ES ++ + T E S
Sbjct: 69 WILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSS 128
Query: 459 IMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNT 572
I + KK S A +Q F+CCG T
Sbjct: 129 IQQ----VLKKSS---ATYELRKNIKPIQNVFQCCGAT 159
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Frame = +3
Query: 264 LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGE 443
L ++ +V G ++ FLG CGA+ S +++ + Y +
Sbjct: 23 LKASAYVSLVCGCAQLLVGFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSLFYKD 82
Query: 444 ---SIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINY 587
S+KE++ + V + + ++ +LQ +CCG+ G +Y
Sbjct: 83 KVYSVKENVREIVKSKYGVMTSEPENKMVTEFIDKLQFYEKCCGSLGPTDY 133
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 2/124 (1%)
Frame = +3
Query: 234 TMVKXLLK-THLAVGP-WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXX 407
T V L K + L + P W ++VG + F+I F GC G++RE+ + Y+
Sbjct: 69 TFVNMLSKASKLYLDPTWPLLIVGFLTFIIGFSGCVGSLRENTSFLTFYSTLLGLLLIAE 128
Query: 408 XXXXXXXFTYGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINY 587
+ + + I + + + D D + + +Q + CCG GA ++
Sbjct: 129 FSAGVFAYACRDQLDNYIRNLLNDVVVGYRD---DPDLQLLIDSMQETWMCCGINGADDW 185
Query: 588 GQFT 599
+ T
Sbjct: 186 DRNT 189
>Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein.
Length = 395
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 279 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 377
+I IV+GAVM V+A GCCG S ++ Y+
Sbjct: 226 YIXIVLGAVMMVVAMXGCCGITGRSRPFLIIYS 258
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 35.5 bits (78), Expect = 0.037
Identities = 29/133 (21%), Positives = 53/133 (39%), Gaps = 20/133 (15%)
Frame = +3
Query: 279 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKES 458
++ V G ++ V+AFLGCCGA +E ++ Y+ F + +
Sbjct: 84 YLLFVGGFIVIVVAFLGCCGAAKEWRPLLCCYSSCLMLILAIQIAATIYAFLHSHMFEND 143
Query: 459 IMDGVGVLFK--------KRSDANADE-AAEAVFSELQRQFECCG---------NTG--A 578
D + K K S+ D + + ++ + CCG N+G
Sbjct: 144 FRDILHSSLKMYNGTDNMKVSNNPQDGLLVKTAWDKIMIEKSCCGVDSKIGEFNNSGWYQ 203
Query: 579 INYGQFTLPESCC 617
+N+G++ P +CC
Sbjct: 204 LNHGRYQFPPACC 216
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.20
Identities = 36/120 (30%), Positives = 43/120 (35%), Gaps = 2/120 (1%)
Frame = -1
Query: 475 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ--*LSRIAPQHPKNAITNIT 302
PTPS M S +P + T T TM T TTM+ + P K+ T T
Sbjct: 153 PTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 212
Query: 301 APTTMKIHGPTARWVFSKXLTMVQFIRNDTPIPTSSXPRSAXTRLKKNSTYFTXLVPHPM 122
PTTMK T + T TP S P + T ST T P M
Sbjct: 213 TPTTMKSTPTTPTTPTTMKSTPT---TPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 269
>U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical
protein F01G12.1 protein.
Length = 178
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 554 ELSLQFRENSLGGLVCVSVRSLFE*HADAIHNALLDALAVGEEEDADHHLHN-DDHQQKD 378
+L+L +E SL ++ SVR+ E H + LD + DHH+HN ++H+ +
Sbjct: 53 DLTLNHKEESLYDMLVASVRAGRESHFELDQ---LDVHTETNQSGHDHHIHNNEEHKHHN 109
Query: 377 CVRDDH 360
DH
Sbjct: 110 MRSHDH 115
>AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical
protein Y37E3.1 protein.
Length = 402
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -1
Query: 316 ITNITAPTTMKIHGPTARWVFSKXLTMVQFIRNDTPIPTSSXPRS-AXTRLK 164
I N+T P+ +IH + +W+ + T Q +N P+P S R+ A T+ K
Sbjct: 353 IKNLTIPSDPEIHVDSVKWI--RVATPTQMKKNGVPLPESVLARAVASTQTK 402
>Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical
protein C54D10.4 protein.
Length = 408
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 528 VFSELQRQFECCGNTGAINYGQF 596
+ +QR++ CCG GAI+YG F
Sbjct: 276 IADRVQRRYCCCGYNGAIDYGFF 298
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 30.3 bits (65), Expect = 1.4
Identities = 26/125 (20%), Positives = 43/125 (34%)
Frame = +3
Query: 240 VKXLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXX 419
VK ++T + V WI I +I F+G GA+ S ++ Y
Sbjct: 59 VKSDIRTGIIVSFWIIIGFAIANVIIGFVGVIGAVIRSKYLLAPYFLFMVILFLLEIAIG 118
Query: 420 XXXFTYGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINYGQFT 599
S++ ++ + V F A+A S ++ CCG N F
Sbjct: 119 ITVLVKRRSVRRTVKEYVFDSFNMN--------AQADISAFNFRYNCCGAENLPNLNCFA 170
Query: 600 LPESC 614
+C
Sbjct: 171 GQPTC 175
>Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical
protein T28F3.3 protein.
Length = 393
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 428 EEDADHHLHNDDHQQKDCVRDDH 360
EE DHH H+ DH + +R +H
Sbjct: 45 EELHDHHEHDHDHHDEQLIRKNH 67
>AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.1 protein.
Length = 487
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 281 DLHSRRGCNVRDRVLGMLWSDTRE-SLHGRHVRNLFAGD 394
D R+ N R +LG W D RE ++ GR F GD
Sbjct: 9 DTFLRKDINTRQIILGSFWRDEREQNVDGRFAVIHFLGD 47
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 302 CNVRDRVLGMLWSDTRESLHGRHVR--NLFAGDHHCASGDQRPPLHLRREHQGEHYGWRR 475
C V+D V G+L +D +E + G H R L A + +R ++ H+ + R
Sbjct: 219 CRVQD-VSGLLPNDLKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARN 277
Query: 476 RVIQK 490
+ ++K
Sbjct: 278 KALKK 282
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 302 CNVRDRVLGMLWSDTRESLHGRHVR--NLFAGDHHCASGDQRPPLHLRREHQGEHYGWRR 475
C V+D V G+L +D +E + G H R L A + +R ++ H+ + R
Sbjct: 219 CRVQD-VSGLLPNDLKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARN 277
Query: 476 RVIQK 490
+ ++K
Sbjct: 278 KALKK 282
>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = -3
Query: 479 HADAIHNALLDALAVGEEEDADHHLHNDDHQQKDCVRDDHA--VTLAYRSTASQERDHEH 306
HA I + A+A EED L ND++ A V +YR ++E +H
Sbjct: 303 HATIIEQMVAGAIA--SEEDILRFLENDEYNSVTATYYLLAERVLASYREEQARELLAKH 360
Query: 305 YSPDDYEDPRTDS 267
DD DP +D+
Sbjct: 361 VEWDDRPDPISDN 373
>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = -3
Query: 479 HADAIHNALLDALAVGEEEDADHHLHNDDHQQKDCVRDDHA--VTLAYRSTASQERDHEH 306
HA I + A+A EED L ND++ A V +YR ++E +H
Sbjct: 303 HATIIEQMVAGAIA--SEEDILRFLENDEYNSVTATYYLLAERVLASYREEQARELLAKH 360
Query: 305 YSPDDYEDPRTDS 267
DD DP +D+
Sbjct: 361 VEWDDRPDPISDN 373
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -3
Query: 398 DDHQQKDCVRDDHAVTLAYRSTASQERDHEHYSPDDYEDP 279
+D ++KD R+DH +S ++ +HE + P + P
Sbjct: 502 EDGREKDDFREDHGREDHGKSEVPEKVEHEQHPPQSHGSP 541
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Frame = +3
Query: 264 LAVGPWIFI-VVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFT-Y 437
+ + P I I + G + V++F G GA+R++ ++ +A FT +
Sbjct: 68 IILNPAILISIFGFSICVVSFFGFMGALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLF 127
Query: 438 GESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 566
E + +L+ ++ AE + LQ ECCG
Sbjct: 128 YTDTTEGLSANWLLLYAVKNYHTNRNLAE-IMDALQENLECCG 169
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Frame = +3
Query: 264 LAVGPWIFI-VVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFT-Y 437
+ + P I I + G + V++F G GA+R++ ++ +A FT +
Sbjct: 92 IILNPAILISIFGFSICVVSFFGFMGALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLF 151
Query: 438 GESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 566
E + +L+ ++ AE + LQ ECCG
Sbjct: 152 YTDTTEGLSANWLLLYAVKNYHTNRNLAE-IMDALQENLECCG 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,411,981
Number of Sequences: 27780
Number of extensions: 257595
Number of successful extensions: 880
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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