Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_O02
         (885 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   7.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   7.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   7.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.7  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 212 IIFTWSFTFKIIVRY 168
           I F WSF F II R+
Sbjct: 320 IYFYWSFGFLIIQRF 334


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 336 PLESQ*CRSCYRRRH 380
           P E   CR  +RRRH
Sbjct: 246 PFECDKCRGRFRRRH 260


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = -3

Query: 643 LSQVREANTHSTGNGKTIDESASHEYGQD 557
           + Q  ++ +HS  N  + ++ +S ++G D
Sbjct: 244 IRQTHKSPSHSVDNSNSSEKKSSIQHGDD 272


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 625 LPVPGRVPTDQIQRENPV 678
           LP P R   + ++R+NPV
Sbjct: 143 LPAPERPSFEGLKRQNPV 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,236
Number of Sequences: 336
Number of extensions: 5009
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)