Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_O01
(581 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC806.07 |ndk1||nucleoside diphosphate kinase|Schizosaccharomy... 182 4e-47
SPCC1235.12c |mug146||meiotically upregulated gene Mug46|Schizos... 27 2.0
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 27 2.0
SPCC338.14 |||adenosine kinase |Schizosaccharomyces pombe|chr 3|... 26 3.5
SPAC1039.07c |||4-aminobutyrate aminotransferase |Schizosaccharo... 26 3.5
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 26 4.6
SPCC613.03 |||conserved fungal protein|Schizosaccharomyces pombe... 25 6.1
SPCC622.16c |epe1||Jmjc domain chromatin associated protein Epe1... 25 8.1
SPBC725.04 |||oxalyl-CoA decarboxylase |Schizosaccharomyces pomb... 25 8.1
>SPAC806.07 |ndk1||nucleoside diphosphate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 151
Score = 182 bits (442), Expect = 4e-47
Identities = 81/144 (56%), Positives = 105/144 (72%)
Frame = +2
Query: 56 LLVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGLVKYM 235
+ VKPD VQRGL+G II +FE KG+KL LKF+ PS +L+++HY++ +PF+ LV +M
Sbjct: 8 IAVKPDAVQRGLIGYIISKFELKGYKLRALKFLVPSRDLVEEHYAEHKGKPFYEKLVGFM 67
Query: 236 SSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVESAKK 415
+SGPV M+WEG VKTGR MLGA+NP DS PGTIRGD I +GRN+ HGSDS+ESA +
Sbjct: 68 ASGPVCAMIWEGKQAVKTGRLMLGASNPLDSAPGTIRGDYGIDLGRNVCHGSDSIESANR 127
Query: 416 EIGLWFTDKEVVGWTPANENWVYE 487
EI LWF E+ + E W+YE
Sbjct: 128 EIKLWFQPSEIQVYDRTIEPWIYE 151
>SPCC1235.12c |mug146||meiotically upregulated gene
Mug46|Schizosaccharomyces pombe|chr 3|||Manual
Length = 311
Score = 27.1 bits (57), Expect = 2.0
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = -2
Query: 448 NFFVRKPEAYFLFSRFNAVRTMDDVTPNLNAEITADSAGLRVSWVSC-AKHLTASLHNIK 272
N FV P R + RT+ TP+L E ++ R+S V C H +S N
Sbjct: 5 NTFVDYPTTQVRKERVHTYRTLTSATPSL--EFFSNENTNRLSEVQCKLTHFLSSSENSS 62
Query: 271 ALPYHRDHR 245
++ R H+
Sbjct: 63 SVRNTRTHK 71
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 27.1 bits (57), Expect = 2.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 129 KPFFSKRSIMVPTRPRCTPSGLTNNKSTLTLFRHHEILL 13
KPF +KRS ++P RP T L+ + EI+L
Sbjct: 512 KPFVNKRSKVLPLRPSVTHDNLSKSSDYSKNEVEREIML 550
>SPCC338.14 |||adenosine kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 340
Score = 26.2 bits (55), Expect = 3.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 551 NHRMFNINYENKTKYTD*NKFTHKPSFHLQVSSPQLLC 438
N+++ ++ N K+ + K + FHL VS +LC
Sbjct: 136 NYKLKDLQQPNVWKFVEEAKVIYVGGFHLTVSPESMLC 173
>SPAC1039.07c |||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 26.2 bits (55), Expect = 3.5
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +2
Query: 221 LVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQP--GTIRGDLCIQVGR--NIIH 385
L++ P++ V GL +++ G ++ T+P+ GT+ GD C+++G NI+H
Sbjct: 349 LLRLKDKHPLIVDV-RGLGLLQ-GIEIASCTDPSKPSDFLGTVIGDKCLELGMNCNIVH 405
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 25.8 bits (54), Expect = 4.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 321 AGLVAPSI*RPVFTTLRPSHTIGTTGPELMYFTRPGKKGR 202
+G + P RP T+L P T+ TT + RP K +
Sbjct: 358 SGSLTPLSSRPAHTSLPPIPTVQTTSSNVPPVNRPSLKSK 397
>SPCC613.03 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 189
Score = 25.4 bits (53), Expect = 6.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 126 PFFSKRSIMVPTRPRCTPSGLTNNKSTLTLF 34
PF K ++V +C PSG N + TL F
Sbjct: 71 PFVKKNEVLVDVLKKCDPSG--NRRITLDEF 99
>SPCC622.16c |epe1||Jmjc domain chromatin associated protein
Epe1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 948
Score = 25.0 bits (52), Expect = 8.1
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 141 PTSLKPFFSKRSIMVPTRPRCTPSGLTNNKSTLTLFRHHEILL 13
P+ +P FS+R + TR RC S K L ++H+ LL
Sbjct: 101 PSFAQPHFSERQSVDKTRSRCL-SRNRRRKRHPNLHKNHQRLL 142
>SPBC725.04 |||oxalyl-CoA decarboxylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 574
Score = 25.0 bits (52), Expect = 8.1
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +2
Query: 251 VPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNI----IHGSDSVESAKKE 418
+ V EG N + GRQ+L T+P + + +G I H SD + + +
Sbjct: 388 ITWVSEGANTMDRGRQLLEVTHPRGRLDAGTMSTMGVGMGYAIASAFAHSSDKIVVVEGD 447
Query: 419 IGLWFTDKEV 448
F+ E+
Sbjct: 448 SAFGFSAMEL 457
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,420,662
Number of Sequences: 5004
Number of extensions: 49245
Number of successful extensions: 119
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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