Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_O01
         (581 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   195   2e-50
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    69   3e-12
AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical...    46   2e-05
U29382-6|AAF99998.1|  379|Caenorhabditis elegans Hypothetical pr...    27   7.4  
L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z81129-6|CAB03412.1|  799|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81129-5|CAB03411.1|  779|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr...    27   9.7  
U39993-1|AAA81086.1|  594|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AF047652-5|AAC04391.2|  449|Caenorhabditis elegans Hypothetical ...    27   9.7  

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  195 bits (476), Expect = 2e-50
 Identities = 90/152 (59%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +2

Query: 35  NNVSVLLLLVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFF 214
           +N     + +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+ HY DL  +PFF
Sbjct: 2   SNTERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFF 61

Query: 215 PGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSD 394
           P L++YMSSGPVV MVW+GL+VVK GR MLGATNP  S PGTIRGD CIQ GRNI HGSD
Sbjct: 62  PSLIEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSD 121

Query: 395 SVESAKKEIGLWFTDKEVVGW-TPANENWVYE 487
           +V+SA +EI  WF  +E+  + +P   +WVYE
Sbjct: 122 AVDSANREIAHWFKQEEINDYASPFINSWVYE 153


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 68.5 bits (160), Expect = 3e-12
 Identities = 37/79 (46%), Positives = 48/79 (60%)
 Frame = +2

Query: 203 RPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNII 382
           +PFFP L+ YMSSGPVV M+WEG +VVK  R +LG       +  +I  DL ++      
Sbjct: 33  KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGC 91

Query: 383 HGSDSVESAKKEIGLWFTD 439
           H SDSV SA +E  LWF +
Sbjct: 92  HCSDSVASANREYVLWFEE 110


>AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.15 protein.
          Length = 139

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
 Frame = +2

Query: 38  NVSVLLLLVKPDGV-QRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFF 214
           N    L+++KP+ V  R L    +      G ++  ++ +  S  L +Q Y+    + F+
Sbjct: 8   NALKFLVVLKPEIVAHRVLAQVALSELRSNGIEIEEMRQMKISGSLAKQLYAQHQGKFFY 67

Query: 215 PGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSD 394
             LV+++SSGPV+ M   G      G   L        QP  IR    +   RN+ H SD
Sbjct: 68  DRLVRHISSGPVIAMRVSGNARKCIGSSRLWPRLEPTVQP--IRQRFALSDVRNVAHASD 125

Query: 395 SVESAKKEIGLW 430
             ++A+KE+ L+
Sbjct: 126 E-DAAEKELQLF 136


>U29382-6|AAF99998.1|  379|Caenorhabditis elegans Hypothetical
           protein R03H10.1 protein.
          Length = 379

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +2

Query: 170 LLQQHYSDLASRPFFPGLVKYMSSGPVVPMVW 265
           LL + + ++ S   +PG V+++   P++P  W
Sbjct: 144 LLDRCWKNVDSMELYPGTVQFLDKLPIIPSNW 175


>L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical
           protein K02D10.4 protein.
          Length = 227

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 91  CGHHY*TFRKERLQTSRFEIRMAIRRTSP 177
           CGH        R +T +FE R+ ++R+SP
Sbjct: 107 CGHPVEVDDHHRRETKKFENRLTLKRSSP 135


>Z81129-6|CAB03412.1|  799|Caenorhabditis elegans Hypothetical
           protein T23F1.7b protein.
          Length = 799

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +2

Query: 188 SDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTG--RQMLGATNPADSQPGTIR 346
           SDL S  +      +  +  VV   WEG+ +V+ G  R + G  N A+  P   R
Sbjct: 66  SDLRSLRYPYAEFAFTDNNAVVMQSWEGVEIVEDGVSRLIFGRENGAEITPSADR 120


>Z81129-5|CAB03411.1|  779|Caenorhabditis elegans Hypothetical
           protein T23F1.7a protein.
          Length = 779

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +2

Query: 188 SDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTG--RQMLGATNPADSQPGTIR 346
           SDL S  +      +  +  VV   WEG+ +V+ G  R + G  N A+  P   R
Sbjct: 66  SDLRSLRYPYAEFAFTDNNAVVMQSWEGVEIVEDGVSRLIFGRENGAEITPSADR 120


>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein
            F12F6.6 protein.
          Length = 1126

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = +2

Query: 197  ASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQML---GATNPADSQPGTI 343
            AS  F      Y+    V+  VW G    +T  Q +   GATN  D++ GTI
Sbjct: 1003 ASSEFLENSKAYIIDNGVILFVWVGSACPQTWVQDVFGVGATNQIDTESGTI 1054


>U39993-1|AAA81086.1|  594|Caenorhabditis elegans Hypothetical
           protein F47E1.3 protein.
          Length = 594

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -3

Query: 168 SSDGHTNFKPTSLKPFFSKRSIMVP-TRPRCTPSGLTNNKSTLTLFRHHEILLIGRP 1
           S + +   KP+ +  F+  +S++ P +     PSGL +N   L L  H  I L+  P
Sbjct: 205 SDEKYLLLKPSKIV-FYGLKSVVQPYSHLESPPSGLISNTHLLILCTHKMIFLLFSP 260


>AF047652-5|AAC04391.2|  449|Caenorhabditis elegans Hypothetical
           protein C34H4.2 protein.
          Length = 449

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
 Frame = -3

Query: 267 SHTIGTTGPELMYFTRPGKKGRDAKSL*CCWRSSSDGHTNFKPTSLKPFFSKRSIMVPTR 88
           S +   T P ++  ++ GK      S      SSS   T    +S+ P  S  +  +P +
Sbjct: 353 SSSTTVTSPAIITTSQGGKASTTPSSAPPAPGSSSASPTGTSGSSVSPPASGPTTSMPAQ 412

Query: 87  PRCTPSG-LTNNKSTLTLFRHHEILLI 10
              TPSG + +   T T F     +LI
Sbjct: 413 ASTTPSGTMGSTLQTTTKFSRSPSILI 439


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,429,975
Number of Sequences: 27780
Number of extensions: 280334
Number of successful extensions: 785
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)