Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_O01
         (581 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   1.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   1.7  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   3.8  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   3.8  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   3.8  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   5.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   6.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   6.7  

>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 569 YENVSFNHRMFNINYENKTK 510
           Y N ++N+  +N NY N  K
Sbjct: 333 YNNNNYNNNNYNNNYNNNCK 352


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
 Frame = +2

Query: 395  SVESAKKEIGLW-------FTDKEVVGWTPANENWVYE*IYFNL 505
            +VE+AK    +W        TD+    WT  NE +V   +Y NL
Sbjct: 1082 NVETAKTNEEMWELIDTEKLTDRLPYPWTMDNERYVKVDMYMNL 1125


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 93  TRPRCTPSGLTNNKSTLTLFRHHEI 19
           T+P C+P  LT + +T  L +  EI
Sbjct: 146 TQPMCSPKLLTFDLTTSQLLKQVEI 170


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 93  TRPRCTPSGLTNNKSTLTLFRHHEI 19
           T+P C+P  LT + +T  L +  EI
Sbjct: 146 TQPMCSPKLLTFDLTTSQLLKQVEI 170


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 93  TRPRCTPSGLTNNKSTLTLFRHHEI 19
           T+P C+P  LT + +T  L +  EI
Sbjct: 146 TQPMCSPKLLTFDLTTSQLLKQVEI 170


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 51  FYYWLSLMVYNVVLWAPLL 107
           F++  S ++ NVV W+  L
Sbjct: 365 FFFPFSFLILNVVYWSTFL 383



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -3

Query: 438 SVNQRPISFLADSTLSEPW 382
           S+N+  ++++AD  L++ W
Sbjct: 43  SINEESMTYVADIFLAQSW 61


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = +2

Query: 236  SSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRN 376
            S+  V  +   G  +V +G+Q  G      +QP T++  +  +  +N
Sbjct: 909  SNSQVQGVAVPGSGIVASGQQHAGGWQSIYAQPQTVQDQIVSEYYQN 955


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 38  NVSVLLLLVKPDGVQRGLVGTIIE 109
           NVS+L L+  PD  +R  +G  IE
Sbjct: 460 NVSLLHLIFPPDIAKRLWLGETIE 483


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,489
Number of Sequences: 438
Number of extensions: 3469
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)