Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_N19
         (824 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.24 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   5.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   5.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.0  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   9.0  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -1

Query: 797  ICWNYFCDQA-TFICFLCIYWFTREKHI 717
            ICWN   +    F+C  C+Y F  ++ I
Sbjct: 1123 ICWNVLLNCVYLFLCGFCVYEFASDERI 1150


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 139 KLYFYLTYSIHIFSTSCXVLF 201
           ++YFY ++   I  T C  LF
Sbjct: 319 RIYFYWSFGFLIVRTVCLCLF 339


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 139 KLYFYLTYSIHIFSTSCXVLF 201
           ++YFY ++   I  T C  LF
Sbjct: 319 RIYFYWSFGFLIVRTVCLCLF 339


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 475 WSTPELDCNSFKL 437
           WS P+LD  SF +
Sbjct: 580 WSDPQLDVTSFTI 592


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 636 WKTCLSQNIRLYHRWLLVDN 577
           WK    ++ RLY   +L+DN
Sbjct: 141 WKQLRYEHYRLYQLSVLIDN 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,310
Number of Sequences: 336
Number of extensions: 3963
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)