Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_N16
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.19 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   3.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   4.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -3

Query: 311 YLICNFVFFCSMKNFVIHILLYVYALLKYF 222
           +L+C + F+C+   F +H LL++  +  +F
Sbjct: 142 FLLCIYYFYCAFIIFTVH-LLFLLCIYHFF 170



 Score = 26.2 bits (55), Expect = 0.25
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = -3

Query: 341 ISIPFFHLFEYLICNFVFFCSMKNFVIHILLYVYALLKYFL 219
           I + F+ +   L+C + F+ +   F +H+LL V     Y++
Sbjct: 224 IHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYM 264



 Score = 25.8 bits (54), Expect = 0.33
 Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
 Frame = -3

Query: 329 FFHLFEYLICNFVFFCSMKNFVIHIL----LYVYALLKYFL 219
           F++ F  L+C + F+ +   F +H+L    +Y + +  +FL
Sbjct: 103 FYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFL 143



 Score = 25.4 bits (53), Expect = 0.43
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 323 HLFEYLICNFVFFCSMKNFVIHIL 252
           HL  +L+C + FFC+   F +H+L
Sbjct: 159 HLL-FLLCIYHFFCAFIIFTMHLL 181



 Score = 23.8 bits (49), Expect = 1.3
 Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
 Frame = -2

Query: 264 DSYTFIC-----VCSFKILSIKMST*LLILRLSYSWNVFPVFLILFCACL*HFQGCGSII 100
           DS  F C     +  F  +SI  +  LL L  S  + V  +F   F     HF  C    
Sbjct: 44  DSLVFKCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYF 103

Query: 99  IDLEIVLMCSQKFSQAII 46
               I+L+C   F  A I
Sbjct: 104 YYAFIILLCVYYFYYAFI 121



 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -3

Query: 311 YLICNFVFFCSMKNFVIHILLYVYALLKYFL 219
           Y   + +F+C    F +H LL  Y     F+
Sbjct: 78  YFTVHLLFYCPFIIFTVHFLLCTYYFYYAFI 108


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 355 FIKKLYQFLFFICLNI*FVTLYFS 284
           FI+K Y   FF+ L+I  V   +S
Sbjct: 30  FIQKFYAVAFFLALSIGVVVSIYS 53


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 263 IHILLYVYALLKYFL*KCQLDFLF*DCHTVGMYFQFS*FS 144
           I +L+    + + F  K    F F    T+G+YFQ   FS
Sbjct: 428 IELLVGNLGMRRNFRKKLDFIFTFITLLTIGLYFQLCEFS 467


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 361 TYSN-LIYKLRKIIYIGINDIITFTKLLKFAPLSDNFLCAWLK 486
           TY + +IYK   II +G+N +   T  +      D F+   LK
Sbjct: 342 TYDSFMIYKTTNIIILGLNVVYVVTAWICAITKRDMFVEFLLK 384


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 361 TYSN-LIYKLRKIIYIGINDIITFTKLLKFAPLSDNFLCAWLK 486
           TY + +IYK   II +G+N +   T  +      D F+   LK
Sbjct: 67  TYDSFMIYKTTNIIILGLNVVYVVTAWICAITKRDMFVEFLLK 109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,404
Number of Sequences: 336
Number of extensions: 3372
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)