Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_N16
         (682 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024361-1|ABC86423.1|  170|Drosophila melanogaster IP07811p pro...    78   1e-14
AE014296-834|AAF47892.1|  238|Drosophila melanogaster CG11342-PA...    76   4e-14
AY052142-1|AAK93566.1| 1367|Drosophila melanogaster SD09926p pro...    30   3.4  
AF097636-1|AAF63187.1| 1368|Drosophila melanogaster bicoid-inter...    30   3.4  
AE013599-166|AAM68350.1| 1367|Drosophila melanogaster CG8276-PB,...    30   3.4  
AE013599-165|AAF57267.2| 1367|Drosophila melanogaster CG8276-PA,...    30   3.4  

>BT024361-1|ABC86423.1|  170|Drosophila melanogaster IP07811p
           protein.
          Length = 170

 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 33/81 (40%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
 Frame = +2

Query: 65  FWEHIKTISKSIIIEPQPWKCYRQAQKRIKKTGNTFQLYDNLKIRSQVDIFIESILKEH- 241
           F + +  +++ +++EPQPWKCY++A++R+KK G  F L+  LK RS VD+ I+  L+E  
Sbjct: 90  FLQKLSNLAELLVVEPQPWKCYQKAERRLKKAGEIFPLFLELKWRSDVDLQIQKYLEESL 149

Query: 242 THIKVYESQNSSWNRKIQSYK 304
              K++ES  + W RKI  Y+
Sbjct: 150 DRRKIFESAPTKWQRKICFYR 170



 Score = 31.9 bits (69), Expect = 0.83
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +1

Query: 16  VSMWIHLNNGDNGLREFL 69
           ++MWIHLN+ D GLR FL
Sbjct: 74  ITMWIHLNHHDQGLRLFL 91


>AE014296-834|AAF47892.1|  238|Drosophila melanogaster CG11342-PA
           protein.
          Length = 238

 Score = 76.2 bits (179), Expect = 4e-14
 Identities = 32/81 (39%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
 Frame = +2

Query: 65  FWEHIKTISKSIIIEPQPWKCYRQAQKRIKKTGNTFQLYDNLKIRSQVDIFIESILKEH- 241
           F + +  +++ +++EPQPWKCY++A++R+KK G  F L+  LK RS VD+ I+  L+E  
Sbjct: 158 FLQKLSNLAELLVVEPQPWKCYQKAERRLKKAGEIFPLFLELKWRSDVDLQIQKYLEESL 217

Query: 242 THIKVYESQNSSWNRKIQSYK 304
              K+++S  + W RKI  Y+
Sbjct: 218 DRRKIFKSAPTKWQRKICFYR 238



 Score = 31.9 bits (69), Expect = 0.83
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +1

Query: 16  VSMWIHLNNGDNGLREFL 69
           ++MWIHLN+ D GLR FL
Sbjct: 142 ITMWIHLNHHDQGLRFFL 159


>AY052142-1|AAK93566.1| 1367|Drosophila melanogaster SD09926p protein.
          Length = 1367

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 16   VSMWIHLNNGDNGLR 60
            V+ WIHLN GDNGL+
Sbjct: 1012 VTKWIHLNFGDNGLK 1026


>AF097636-1|AAF63187.1| 1368|Drosophila melanogaster
            bicoid-interacting protein BIN3 protein.
          Length = 1368

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 16   VSMWIHLNNGDNGLR 60
            V+ WIHLN GDNGL+
Sbjct: 1013 VTKWIHLNFGDNGLK 1027


>AE013599-166|AAM68350.1| 1367|Drosophila melanogaster CG8276-PB,
            isoform B protein.
          Length = 1367

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 16   VSMWIHLNNGDNGLR 60
            V+ WIHLN GDNGL+
Sbjct: 1012 VTKWIHLNFGDNGLK 1026


>AE013599-165|AAF57267.2| 1367|Drosophila melanogaster CG8276-PA,
            isoform A protein.
          Length = 1367

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 16   VSMWIHLNNGDNGLR 60
            V+ WIHLN GDNGL+
Sbjct: 1012 VTKWIHLNFGDNGLK 1026


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,066,463
Number of Sequences: 53049
Number of extensions: 497644
Number of successful extensions: 1276
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)