Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_N14
(785 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B5A57 Cluster: PREDICTED: similar to conserved ... 130 3e-29
UniRef50_Q7PM66 Cluster: ENSANGP00000015679; n=2; Culicidae|Rep:... 114 3e-24
UniRef50_Q9VKM7 Cluster: CG33129-PE, isoform E; n=3; Sophophora|... 103 5e-21
UniRef50_UPI0000D566D8 Cluster: PREDICTED: hypothetical protein;... 100 4e-20
UniRef50_UPI0000DB73C0 Cluster: PREDICTED: hypothetical protein;... 75 3e-12
UniRef50_UPI0000E48809 Cluster: PREDICTED: hypothetical protein,... 69 1e-10
UniRef50_Q4RF87 Cluster: Chromosome 14 SCAF15120, whole genome s... 63 7e-09
UniRef50_A6NNF2 Cluster: Uncharacterized protein ENSP00000238788... 58 3e-07
UniRef50_A7SEU8 Cluster: Predicted protein; n=1; Nematostella ve... 53 7e-06
UniRef50_O16527 Cluster: Ce-LEA; n=2; Caenorhabditis|Rep: Ce-LEA... 35 2.0
UniRef50_A1B7L5 Cluster: Integral membrane sensor signal transdu... 35 2.7
UniRef50_Q0VHZ5 Cluster: Actin deviating protein; n=7; Eukaryota... 35 2.7
UniRef50_UPI00015B8F5B Cluster: UPI00015B8F5B related cluster; n... 34 4.6
UniRef50_Q87KR6 Cluster: Putative uncharacterized protein VP2910... 34 4.6
UniRef50_Q21JZ1 Cluster: Sensor protein; n=1; Saccharophagus deg... 34 4.6
UniRef50_O97299 Cluster: Putative uncharacterized protein MAL3P7... 34 4.6
UniRef50_Q24WE5 Cluster: Putative uncharacterized protein; n=2; ... 33 6.1
>UniRef50_UPI00015B5A57 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 638
Score = 130 bits (315), Expect = 3e-29
Identities = 79/241 (32%), Positives = 125/241 (51%), Gaps = 8/241 (3%)
Frame = +2
Query: 59 DPFKFPCSEIATYRKY*FKDILDRMTSTRRNPWLWASFVLLVSIAGLVAYDVSRAGGNFP 238
D + + CS + K + + +S PW F LL+ I +VAYD + G +F
Sbjct: 402 DKYLYSCSNTSEAL---IKKMSSKKSSKGGFPWKTGCFFLLLIIGAIVAYDTHKHG-SFE 457
Query: 239 KSTTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAPVYYAQTVEICHPYTQLSKDA 418
++TGK ++ GI + +Q+ W T SA+ +LE+ +P YY V+ PY +L+ D
Sbjct: 458 ATSTGKFMRESGITDFAQKTWVSTKLYSAKALEYLESTSPEYYKAVVDFSTPYVKLAGD- 516
Query: 419 FFIALKKAGI-LYGNVQDYVVEKTPVVIKTIEEYAPGLVDNVQSYASTAWSGLKKYSSDY 595
F++ +K + + LY NV YVV K PV+ ++E Y PGL+D+VQ + +K YS+
Sbjct: 517 FYLVVKNSSVKLYDNVSTYVVAKIPVIQASVEHYVPGLLDSVQKNSLKGVEIVKIYSAWI 576
Query: 596 YQIT-------TDYLVTKVFVGDWAPEVLXNKTQSALNMTKSQVSSYYVWFRQQVHIYSX 754
+ T T +L T VFVG +PE L + A+N T + S Y W ++V S
Sbjct: 577 AEQTVENSVKATRWLKTNVFVGKLSPESLQSYASQAINTTHTFASQTYDWVYEKVQTLSK 636
Query: 755 I 757
+
Sbjct: 637 V 637
>UniRef50_Q7PM66 Cluster: ENSANGP00000015679; n=2; Culicidae|Rep:
ENSANGP00000015679 - Anopheles gambiae str. PEST
Length = 586
Score = 114 bits (274), Expect = 3e-24
Identities = 68/201 (33%), Positives = 97/201 (48%)
Frame = +2
Query: 155 WLWASFVLLVSIAGLVAYDVSRAGGNFPKSTTGKLFKDLGILEHSQQAWQKTLSTSARGY 334
+L A+F+L L+ YD RAGG F S TG+ K G+L Q AW T+ SARGY
Sbjct: 397 FLLATFLLFGVTGALIGYDTYRAGGKFEASFTGQTLKQAGLLPAVQDAWTCTMKYSARGY 456
Query: 335 LWLETNAPVYYAQTVEICHPYTQLSKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIEE 514
W ETN P PY + S D + + N++ +K PVV IE+
Sbjct: 457 KWAETNVPA--------LGPYVEFSIDFGKVLWNGTKKGFANMKLLAEQKLPVVADFIEQ 508
Query: 515 YAPGLVDNVQSYASTAWSGLKKYSSDYYQITTDYLVTKVFVGDWAPEVLXNKTQSALNMT 694
YAPGL + + + ++S+ Y+ T ++ T+VFVG + E L A N T
Sbjct: 509 YAPGLPKKIGDASCAFCDTVSTFASNAYKHTFEFFKTQVFVGKLSMESLG----KAFNST 564
Query: 695 KSQVSSYYVWFRQQVHIYSXI 757
+ + YY WF QV Y+ +
Sbjct: 565 QQAAAQYYSWFNDQVDFYAKL 585
>UniRef50_Q9VKM7 Cluster: CG33129-PE, isoform E; n=3; Sophophora|Rep:
CG33129-PE, isoform E - Drosophila melanogaster (Fruit
fly)
Length = 677
Score = 103 bits (247), Expect = 5e-21
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 1/202 (0%)
Frame = +2
Query: 155 WLWASFVLLVSIAGLVAYDVSRAG-GNFPKSTTGKLFKDLGILEHSQQAWQKTLSTSARG 331
W S ++ IAG + YD G G F KS TGK+ K+ G+L H Q++W + ARG
Sbjct: 490 WTLGSIFIIALIAGALYYDTEVNGKGVFEKSATGKVLKNAGVLPHVQKSWYTVMGAGARG 549
Query: 332 YLWLETNAPVYYAQTVEICHPYTQLSKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIE 511
Y W E N P Y P + + D + +A A Y N + Y K PVV K I+
Sbjct: 550 YKWAEVNVPPY-------AEPVIKTTCDLWKLARNAACNAYQNGKGYFGAKWPVVAKFID 602
Query: 512 EYAPGLVDNVQSYASTAWSGLKKYSSDYYQITTDYLVTKVFVGDWAPEVLXNKTQSALNM 691
+Y P ++++A +G+ ++ Y+ + KV VG +PE ALN
Sbjct: 603 QYVPNSSGKIEAFA----AGVSDLAASSYEKAAALIKEKVLVGRLSPE----NINQALNQ 654
Query: 692 TKSQVSSYYVWFRQQVHIYSXI 757
T++ YY F ++V Y+ +
Sbjct: 655 TRNAALEYYNQFHKKVDAYAKL 676
>UniRef50_UPI0000D566D8 Cluster: PREDICTED: hypothetical protein;
n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
protein - Tribolium castaneum
Length = 201
Score = 100 bits (240), Expect = 4e-20
Identities = 58/195 (29%), Positives = 95/195 (48%)
Frame = +2
Query: 155 WLWASFVLLVSIAGLVAYDVSRAGGNFPKSTTGKLFKDLGILEHSQQAWQKTLSTSARGY 334
W F + + Y ++ G++ KS T K + G+ +++ +A K
Sbjct: 10 WFKFLFYTTTLLLAIYIYADTKQAGSWQKSNTRKFLVETGVYDYTHKAVGKVQEGWLVVD 69
Query: 335 LWLETNAPVYYAQTVEICHPYTQLSKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIEE 514
++ N P Y +E PY + I L+ N+++ V+EK PVV+K+I+
Sbjct: 70 NKIKENFPTYRQAVIEFSEPYIEFFNSFGQILCN----LFANIKEAVIEKYPVVVKSIDS 125
Query: 515 YAPGLVDNVQSYASTAWSGLKKYSSDYYQITTDYLVTKVFVGDWAPEVLXNKTQSALNMT 694
YAPG+V+ Q+ STAWS S Y + DYL T+VFVG +PE + A N T
Sbjct: 126 YAPGVVEQSQNAVSTAWSS----SVFYVNRSIDYLRTEVFVGQLSPENMQRVVYEAFNTT 181
Query: 695 KSQVSSYYVWFRQQV 739
+++ + YY W ++V
Sbjct: 182 QTKATEYYHWLYEKV 196
>UniRef50_UPI0000DB73C0 Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 188
Score = 74.5 bits (175), Expect = 3e-12
Identities = 53/209 (25%), Positives = 98/209 (46%)
Frame = +2
Query: 134 TSTRRNPWLWASFVLLVSIAGLVAYDVSRAGGNFPKSTTGKLFKDLGILEHSQQAWQKTL 313
++ ++ PW +LL+ I+ ++ YD+ + +F S T K K G+ QQ+W
Sbjct: 4 SANKKFPWKKGIILLLLFISVILGYDIYKHD-DFKASNTNKFLKRSGLFACGQQSWIIMQ 62
Query: 314 STSARGYLWLETNAPVYYAQTVEICHPYTQLSKDAFFIALKKAGILYGNVQDYVVEKTPV 493
S + ++E +P YY T+E C PY +L+ GN++ Y+ P
Sbjct: 63 EYSYKALEFVEATSPEYYKATIETCQPYIKLT---------------GNIEHYI----PG 103
Query: 494 VIKTIEEYAPGLVDNVQSYASTAWSGLKKYSSDYYQITTDYLVTKVFVGDWAPEVLXNKT 673
++ I+ + ++ ++ Y++ L ++S T +L VFVG +PE L N
Sbjct: 104 MLDEIKLRSNQGLEYMKVYSNLCVEKLNEHSI----ATLQWLEHNVFVGKLSPENLQNYA 159
Query: 674 QSALNMTKSQVSSYYVWFRQQVHIYSXIP 760
A++ T++ S Y W ++V S +P
Sbjct: 160 SKAIDTTQTLASQTYDWVYEKVQTLSKVP 188
>UniRef50_UPI0000E48809 Cluster: PREDICTED: hypothetical protein,
partial; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 459
Score = 68.9 bits (161), Expect = 1e-10
Identities = 41/169 (24%), Positives = 80/169 (47%)
Frame = +2
Query: 113 KDILDRMTSTRRNPWLWASFVLLVSIAGLVAYDVSRAGGNFPKSTTGKLFKDLGILEHSQ 292
+++L++M+S R PW V+ ++I +A D + G F S T + G+L S+
Sbjct: 257 EELLEKMSSFRM-PWKTLISVVFLAIMTFLAMDFYTSHG-FQGSRTEVFLQKSGLLAISK 314
Query: 293 QAWQKTLSTSARGYLWLETNAPVYYAQTVEICHPYTQLSKDAFFIALKKAGILYGNVQDY 472
QAW K + WL+ NAP+YYA+ E+C PY L+ + + + ++D+
Sbjct: 315 QAWTKISLFTTNIMGWLQVNAPIYYAKVSELCGPYLALALEKLYDLWAWFVTVTTPLKDW 374
Query: 473 VVEKTPVVIKTIEEYAPGLVDNVQSYASTAWSGLKKYSSDYYQITTDYL 619
+ P+ + I ++ + + + W + +Y+ + + YL
Sbjct: 375 IAVNAPIWLDWILAQTVEILQRLMVWLTQLWEVVSEYAIAGWIVVAPYL 423
>UniRef50_Q4RF87 Cluster: Chromosome 14 SCAF15120, whole genome
shotgun sequence; n=4; Tetraodontidae|Rep: Chromosome 14
SCAF15120, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 637
Score = 63.3 bits (147), Expect = 7e-09
Identities = 32/81 (39%), Positives = 43/81 (53%)
Frame = +2
Query: 152 PWLWASFVLLVSIAGLVAYDVSRAGGNFPKSTTGKLFKDLGILEHSQQAWQKTLSTSARG 331
PW VLL+ A +A+D+ R+ G F STT G+ SQQAW K S +G
Sbjct: 433 PWSKLLLVLLLFAASFMAHDI-RSHGAFAGSTTATYLHKSGVTAVSQQAWSKVSVYSKQG 491
Query: 332 YLWLETNAPVYYAQTVEICHP 394
+ WLE N P YY++ V + P
Sbjct: 492 FSWLEKNTPHYYSECVRVVGP 512
>UniRef50_A6NNF2 Cluster: Uncharacterized protein ENSP00000238788;
n=40; Tetrapoda|Rep: Uncharacterized protein
ENSP00000238788 - Homo sapiens (Human)
Length = 692
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/88 (35%), Positives = 46/88 (52%)
Frame = +2
Query: 146 RNPWLWASFVLLVSIAGLVAYDVSRAGGNFPKSTTGKLFKDLGILEHSQQAWQKTLSTSA 325
R PW +LLV G + +D+ R+ +F S TG+L + G L SQQA K S S
Sbjct: 482 RLPWTRLLLLLLVFAVGFLCHDL-RSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSL 540
Query: 326 RGYLWLETNAPVYYAQTVEICHPYTQLS 409
+GY WL P++ + + + P QL+
Sbjct: 541 QGYSWLGETLPLWGSHLLTVVRPSLQLA 568
>UniRef50_A7SEU8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 760
Score = 53.2 bits (122), Expect = 7e-06
Identities = 36/149 (24%), Positives = 70/149 (46%)
Frame = +2
Query: 173 VLLVSIAGLVAYDVSRAGGNFPKSTTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETN 352
+L++ + V+YDV R GG + S T + ++ GI + + +A+ +G W++ N
Sbjct: 516 LLMLLLIAAVSYDVCRHGG-YQGSKTARFAQEYGIEQGTIKAYGHVKHAFDKGNSWVQEN 574
Query: 353 APVYYAQTVEICHPYTQLSKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIEEYAPGLV 532
P YY++ E P Q + D +A + + Y+ +K P +++ +E+ AP
Sbjct: 575 YPTYYSKFREYADPAGQYAMDKLTLAGQFIEEQSRPARAYLNKKVPELLERVEKEAPVYW 634
Query: 533 DNVQSYASTAWSGLKKYSSDYYQITTDYL 619
V S+ W+ + + Y I +L
Sbjct: 635 AIVHSHVMHWWNVVWPPTRYYLMIVWAFL 663
>UniRef50_O16527 Cluster: Ce-LEA; n=2; Caenorhabditis|Rep: Ce-LEA -
Caenorhabditis elegans
Length = 733
Score = 35.1 bits (77), Expect = 2.0
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 407 SKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIEEYAPGLVDNVQSYASTAWSGLKKYS 586
+KD +KAG D V EK + + + ++ DNV++ AS A++ K +
Sbjct: 550 AKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKA 609
Query: 587 SDYYQITTDYL-VTKVFVGDWAPEVLXNKTQSALNMTKSQVS 709
SD + T D K GD A + +K +A + TK + S
Sbjct: 610 SDAWDKTKDKAGEAKDKAGD-AWDNTKDKAGNAWDSTKDKAS 650
>UniRef50_A1B7L5 Cluster: Integral membrane sensor signal
transduction histidine kinase precursor; n=1; Paracoccus
denitrificans PD1222|Rep: Integral membrane sensor
signal transduction histidine kinase precursor -
Paracoccus denitrificans (strain Pd 1222)
Length = 419
Score = 34.7 bits (76), Expect = 2.7
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +3
Query: 24 SSFVEGSVLSFSIHLNSRVLKLPHIENTDSRIF*TE*R-ALEEIPGCGPALFCWSALLVW 200
S F+ G++ L +RV KLP E+ + I + R + EIP P W L++W
Sbjct: 80 SRFLGGALRHTGQPLEARVSKLPGQESFTASIRVGDGRWFITEIPDLSPPPGRWKVLVIW 139
Query: 201 *LMTCLGLEETSLRVQRESCSKIWAFLSIVNRLG 302
+ LG S+ R + V+R+G
Sbjct: 140 LALIVLGSAAISIHAARRLTRPLQLLEDAVDRVG 173
>UniRef50_Q0VHZ5 Cluster: Actin deviating protein; n=7;
Eukaryota|Rep: Actin deviating protein - Bolivina sp.
isolate 615
Length = 360
Score = 34.7 bits (76), Expect = 2.7
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -2
Query: 640 TNKNFSNQIVSCDLIIIARVLFESAPGRRCIALNVVYKTRSILFN--GLNNDRRFLHH 473
T+ NF+ + C+L V++E G + I N ++ ILFN + N+R +HH
Sbjct: 197 TSLNFNEDMKHCELTSDVEVVYELPDGEKIIVGNERFRAPEILFNPTHVGNERLGIHH 254
>UniRef50_UPI00015B8F5B Cluster: UPI00015B8F5B related cluster; n=1;
unknown|Rep: UPI00015B8F5B UniRef100 entry - unknown
Length = 529
Score = 33.9 bits (74), Expect = 4.6
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = +2
Query: 449 LYGNVQDYVVEKTPVVIKTIEEYAPGLVDNVQSYASTAWSGLKKYSSDYYQITTDYLVTK 628
L+ +++ V+E + +E+ LVD + Y + A+ L S + YQ+T + L+ K
Sbjct: 255 LWASLRPGVLEAFAQEPQQVEDTGRYLVDVDERYVADAYHSL---SIEGYQVTPE-LIEK 310
Query: 629 VFVGDWAPE 655
+ +GDW PE
Sbjct: 311 IRLGDWKPE 319
>UniRef50_Q87KR6 Cluster: Putative uncharacterized protein VP2910;
n=1; Vibrio parahaemolyticus|Rep: Putative
uncharacterized protein VP2910 - Vibrio parahaemolyticus
Length = 423
Score = 33.9 bits (74), Expect = 4.6
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 341 LETNAPVYYAQTVEICHPYTQLSKDAFFIA-LKKAGILYG-NVQDYVVEKTPVVIKTIEE 514
LET + Y Q E + KDA I L + I G N+ V K+P+ + IEE
Sbjct: 20 LETLSAGYLLQRYENGFKPDTIKKDAQGIQHLYRFCINQGINLHQLVASKSPLSMGDIEE 79
Query: 515 YAPGLVDNVQSYASTAWSGLKKYSSDYYQ 601
YA N SY S + + S DYY+
Sbjct: 80 YASFCSVNYASYCSPSKDTYELVSVDYYK 108
>UniRef50_Q21JZ1 Cluster: Sensor protein; n=1; Saccharophagus
degradans 2-40|Rep: Sensor protein - Saccharophagus
degradans (strain 2-40 / ATCC 43961 / DSM 17024)
Length = 462
Score = 33.9 bits (74), Expect = 4.6
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Frame = +2
Query: 191 AGLVAYDVSRAGGNFPKSTTGKLFKDLG-ILEHSQQAWQKT--LSTSARGYLW-----LE 346
AG A D+ ++ F ++T K DL +L HS Q Q T L T A L LE
Sbjct: 279 AGTRAADIVKSMLEFSRTTNQKAATDLNKLLTHSLQLAQNTFKLETPAGIELPDIHCDLE 338
Query: 347 TNAPVYYAQTVEICHPYTQLSKDAF--FIALKKAGILYGNVQDYVVEKTPVVIKTIEEYA 520
N P+ YA EI L +A F + + L + V+ T+E+
Sbjct: 339 ENLPLIYAAATEIQQVILNLLLNAAQAFRSEEYGAPLQPQIHIQTKRCGGWVVITVEDNG 398
Query: 521 PGLVDNVQ 544
PG+ DNV+
Sbjct: 399 PGMPDNVK 406
>UniRef50_O97299 Cluster: Putative uncharacterized protein
MAL3P7.37; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL3P7.37 - Plasmodium
falciparum (isolate 3D7)
Length = 1542
Score = 33.9 bits (74), Expect = 4.6
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Frame = +2
Query: 59 DPFKFPCSEIATYRKY*FKDILDRMTSTRRNPWLWASFVLLVSIAGLVAYDVSRAGGNFP 238
D K S I TY +Y K+ + + RR W+ S +L + V DV R+
Sbjct: 513 DKLKEEKSNILTYLQYNIKNNYNMNSDIRR--WIIDSVLLDENDRIQVKKDVKRS----- 565
Query: 239 KSTTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAPVYYAQTV-EICHPYTQLSKD 415
T + K I+ ++ +Q L L+ +N +YYAQ V ++C + L
Sbjct: 566 -VNTWNVHKS--IIYEIKKTYQYILKNIICSILYKHSNK-IYYAQGVHDVCLVFITLYFH 621
Query: 416 AFFIALKKAGILYGNVQDYVVEK 484
FF+ KK L + YVV K
Sbjct: 622 KFFLRYKKYVFLEHFISRYVVNK 644
>UniRef50_Q24WE5 Cluster: Putative uncharacterized protein; n=2;
Desulfitobacterium hafniense|Rep: Putative
uncharacterized protein - Desulfitobacterium hafniense
(strain Y51)
Length = 340
Score = 33.5 bits (73), Expect = 6.1
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 173 VLLVSIAGLVAYD-VSRAGGNFPKSTTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLET 349
+LL+ +AGL + V G + L ++L +E + AW K L A G LWL+
Sbjct: 30 ILLLLLAGLPYFQHVGAYRGAVDRYDFAALTQELAWIEKNA-AWLKKLPFIAEGELWLKL 88
Query: 350 NAPVYYAQTVEICH 391
N Y A E+ H
Sbjct: 89 NQGEYEAIEPELVH 102
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 801,756,405
Number of Sequences: 1657284
Number of extensions: 16457588
Number of successful extensions: 41808
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 40350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41787
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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